@article{YoungEtAl1971a, year = {1971}, journal = {International Journal of Systematic Bacteriology}, volume = {21}, pages = {58-63}, author = {Young, V.M. and Kenton, D.M. and Hobbs, B.J. and Moody, M.R.}, title = {\textit{Levinea}, a new genus of the family \textit{Enterobacteriaceae}.}, doi = {10.1099/00207713-21-1-58}, issue = {1} } @incollection{Farmeriii1981b, year = {1981}, booktitle = {The procaryotes, a handbook on habitats, isolation, and identification of bacteria}, publisher = {Springer-Verlag}, address = {Berlin}, editor = {Starr, M.P. and et al}, author = {Farmer Iii, J.J.}, title = {The genus \textit{Citrobacter}.}, pages = {1140-1147} } @article{YoungEtAl1971a, year = {1971}, journal = {International Journal of Systematic Bacteriology}, volume = {21}, pages = {58-63}, author = {Young, V.M. and Kenton, D.M. and Hobbs, B.J. and Moody, M.R.}, title = {\textit{Levinea}, a new genus of the family \textit{Enterobacteriaceae}.}, doi = {10.1099/00207713-21-1-58}, issue = {1} } @article{LeminorEtAl1970a, year = {1970}, journal = {Ann Inst Pasteur (Paris)}, volume = {119}, pages = {206-210}, author = {Le Minor, L. and Rohde, R. and Taylor, J.}, title = {[Nomenclature of \textit{Salmonella}].}, issue = {2}, pmid = {5459083} } @article{LeminorEtAl1982a, year = {1982}, journal = {Ann. Microbiol.}, volume = {133B}, pages = {245-254}, author = {Le Minor, L. and Véron, M. and Popoff, M.}, title = {Proposition pour une nomenclature des \textit{Salmonella}.} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @article{Brenner1984g, year = {1984}, journal = {International Journal of Systematic Bacteriology}, volume = {34}, pages = {243-244}, author = {Brenner, D.}, title = {International Committee on Systematic Bacteriology. Subcommittee on Taxonomy of the \textit{Enterobacteriaceae}}, doi = {10.1099/00207713-34-2-243}, issue = {2} } @article{LeminorEtAl1982a, year = {1982}, journal = {Ann. Microbiol.}, volume = {133B}, pages = {245-254}, author = {Le Minor, L. and Véron, M. and Popoff, M.}, title = {Proposition pour une nomenclature des \textit{Salmonella}.} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @article{LeminorEtAl1986a, year = {1986}, journal = {Ann Inst Pasteur Microbiol}, volume = {137B}, pages = {211-217}, author = {Le Minor, L. and Popoff, M.Y. and Laurent, B. and Hermant, D.}, title = {[Characterization of a 7th subspecies of \textit{Salmonella}: \textit{S. choleraesuis} subsp. \textit{indica} subsp. nov].}, abstract = {A new \textit{Salmonella} subspecies designated as \textit{S. choleraesuis} subsp. \textit{indica} (shortly, subspecies VI) was delineated on the basis of biochemical characters and genomic relatedness. Eight serovars were assigned to this subspecies: one of these was previously classified in subspecies I (serovar Ferlac) and seven in subspecies II. This subspecies can be identified by five biochemical characters: gelatinase+, malonate-, L(+)tartrate-, salicin- and sorbitol-. The type strain is CIP 102501 (serovar 1,6,14,25:a:e,n,x formerly called Ferlac).}, doi = {10.1016/s0769-2609(86)80110-7}, issue = {2}, pmid = {3689588} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @article{BrennerEtAl1982a, year = {1982}, journal = {J Clin Microbiol}, volume = {15}, pages = {703-713}, author = {Brenner, D.J. and Davis, B.R. and Steigerwalt, A.G. and Riddle, C.F. and McWhorter, A.C. and Allen, S.D. and Farmer, J.J. and Saitoh, Y. and Fanning, G.R.}, title = {Atypical biogroups of \textit{Escherichia coli} found in clinical specimens and description of \textit{Escherichia hermannii} sp. nov.}, abstract = {DNA relatedness was used to define the biochemical boundaries of \textit{Escherichia coli}. A large number of biochemically atypical strains were shown to belong to biogroups of \textit{E. coli}. These included strains negative in reactions for indole, all three decarboxylases, D-mannitol, lactose, or methyl red and strains positive in reactions for H2S, urea, citrate, KCN, adonitol, myo-inositol, or phenylalanine deaminase. Frequency and source data are presented for these atypical \textit{E. coli} biogroups. One group of KCN-positive, cellobiose-positive, yellow-pigmented strains was 84 to 91% interrelated but only 35 to 45% related to \textit{E. coli}. The name \textit{Escherichia hermannii} sp. nov. is proposed for this group of organisms that was formerly called Enteric Group 11 by the Enteric Section, Centers for Disease Control, Atlanta, GA. Twenty-nine strains of \textit{E. hermannii} have been isolated in the United States from a variety of clinical sources, principally wounds, sputum, and stools. Three additional strains were isolated from food. \textit{E. hermannii} strains are gram-negative, oxidase-negative, fermentative, motile rods. In addition to yellow pigment and positive KCN and cellobiose tests, the biochemical reactions characteristic of 32 strains of \textit{E. hermannii} were as follows: gas from D-glucose, acid from D-glucose, maltose, D-xylose, L-arabinose, L-rhamnose, and D-mannitol; no acid from adonitol or inositol; variable acid production from lactose and sucrose; positive tests for indole, methyl red, and mucate; negative tests for Voges-Proskauer. Simmons citrate, H2S, urea, phenylalanine deaminase, and gelatin hydrolysis; negative or delayed test for L-lysine decarboxylase and negative test for L-arginine dihydrolase; and positive test for ornithine decarboxylase. \textit{E. hermannii} strains were resistant to penicillin, ampicillin, and carbenicillin and sensitive to other commonly used antibiotics. Wounds account for almost 50% of human isolates of \textit{E. hermannii}, followed by sputum or lung isolates (ca. 25%) and stool isolates (20%).}, issue = {4}, pmid = {7040466} } @article{LeminorEtAl1970a, year = {1970}, journal = {Ann Inst Pasteur (Paris)}, volume = {119}, pages = {206-210}, author = {Le Minor, L. and Rohde, R. and Taylor, J.}, title = {[Nomenclature of \textit{Salmonella}].}, issue = {2}, pmid = {5459083} } @article{LeminorEtAl1982a, year = {1982}, journal = {Ann. Microbiol.}, volume = {133B}, pages = {245-254}, author = {Le Minor, L. and Véron, M. and Popoff, M.}, title = {Proposition pour une nomenclature des \textit{Salmonella}.} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @article{HoffmannEtAl2005c, year = {2005}, journal = {J Clin Microbiol}, volume = {43}, pages = {3297-3303}, author = {Hoffmann, H. and Stindl, S. and Ludwig, W. and Stumpf, A. and Mehlen, A. and Monget, D. and Pierard, D. and Ziesing, S. and Heesemann, J. and Roggenkamp, A. and Schleifer, K.H.}, title = {\textit{Enterobacter hormaechei} subsp. \textit{oharae} subsp. nov., \textit{E. hormaechei} subsp. \textit{hormaechei} comb. nov., and \textit{E. hormaechei} subsp. \textit{steigerwaltii} subsp. nov., three new subspecies of clinical importance.}, abstract = {Six species and six additional genovars are combined within the so-called \textit{Enterobacter cloacae} complex, with one of them being the species \textit{Enterobacter hormaechei}. In a recent population genetic study, two genetic clusters were found in close phylogenetic proximity to the genetic cluster of \textit{E. hormaechei}. In order to prove the hypothesis that these three genetic clusters belong to the same species, we performed cross-hybridization experiments in microplates with DNAs of representatives of each genetic cluster. The close phylogenetic relationship among the clusters was reflected by their relatively low deltaT(m) values, ranging from 0.3 to 4.8, confirming the hypothesis that the clusters are parts of the same species. These clusters can be distinguished from the other species of the \textit{E. cloacae} complex, which have deltaT(m) values of 5.6 to 10.3. Forty-eight \textit{E. hormaechei} strains from the different genetic clusters were phenotypically characterized with 129 biochemical tests. In this way, \textit{E. hormaechei} could be differentiated from the other species of the \textit{E. cloacae} complex because it tests negative in the 3-hydroxy-butyrate test. The three genetic clusters of \textit{E. hormaechei} could also be differentiated from each other by using phenotypic tests. Hence, we propose three new subspecies of \textit{E. hormaechei} corresponding to genetic clusters VI, VII, and VIII of the \textit{E. cloacae} complex. \textit{E. hormaechei} subsp. \textit{hormaechei} comb. nov. corresponds to the original species description, as it gives negative results for the adonitol, d-arabitol, d-sorbitol, and d-melibiose tests and a positive result for the dulcitol test. \textit{E. hormaechei} subsp. \textit{oharae} subsp. nov. gives negative results for the dulcitol, adonitol, and d-arabitol tests and positive results for the d-sorbitol and d-melibiose tests. \textit{E. hormaechei} subsp. \textit{steigerwaltii} subsp. nov. gives a negative result for the dulcitol test and positive results for the adonitol, d-arabitol, d-sorbitol, and d-melibiose tests. Among the members of the \textit{E. cloacae} complex, \textit{E. hormaechei} seems to be the species most frequently recovered from clinical specimens.}, doi = {10.1128/JCM.43.7.3297-3303.2005}, issue = {7}, pmid = {16000451} } @article{Burkey1928a, year = {1928}, journal = {Iowa State College Journal of Science}, volume = {3}, pages = {57-100}, author = {Burkey, L.A.}, title = {The fermentation of corn-stalks and their constituents. I. Studies on the pectin-fermenting bacteria.} } @article{WerkmanGillen1932a, year = {1932}, journal = {J Bacteriol}, volume = {23}, pages = {167-182}, author = {Werkman, C.H. and Gillen, G.F.}, title = {\textit{Bacteria} Producing Trimethylene Glycol.}, doi = {10.1128/jb.23.2.167-182.1932}, issue = {2}, pmid = {16559543} } @article{LeminorEtAl1982a, year = {1982}, journal = {Ann. Microbiol.}, volume = {133B}, pages = {245-254}, author = {Le Minor, L. and Véron, M. and Popoff, M.}, title = {Proposition pour une nomenclature des \textit{Salmonella}.} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @incollection{Borman1957a, year = {1957}, booktitle = {Bergey's Manual of Determinative Bacteriology, 7th edition}, publisher = {The Williams & Wilkins Co}, address = {Baltimore}, editor = {Breed, R.S. and Murray, E.G.D. and Smith, N.R.}, author = {Borman, E.K.}, title = {Genus IV. \textit{Paracolobactrum} Borman et al., 1944,}, pages = {346-348} } @incollection{Kauffmann1964a, year = {1964}, booktitle = {The world problem of salmonellosis}, publisher = {Junk Publications}, address = {The Hague}, editor = {Van Oye, E.}, author = {Kauffmann, F.}, title = {Das Kauffmann-White-Schema.}, pages = {21-46} } @article{WarrenScott1930a, year = {1930}, journal = {J Hyg (Lond)}, volume = {29}, pages = {415-417}, author = {Warren, S.H. and Scott, W.M.}, title = {A New Serological Type of \textit{Salmonella}.}, issue = {4}, pmid = {20475042} } @incollection{Schroeter1889a, year = {1889}, booktitle = {Kryptogamen-Flora von Schlesien, Band 3, Heft 3, Pilze}, publisher = {Max Müller}, address = {Breslau}, editor = {Cohn, F.}, author = {Schroeter, J.}, title = {\textit{Schizomycetes} (1886), pp. 131-256.}, pages = {1-814} } @article{HataEtAl2016a, year = {2016}, journal = {Microbiol Immunol}, volume = {60}, pages = {303-311}, author = {Hata, H. and Natori, T. and Mizuno, T. and Kanazawa, I. and Eldesouky, I. and Hayashi, M. and Miyata, M. and Fukunaga, H. and Ohji, S. and Hosoyama, A. and Aono, E. and Yamazoe, A. and Tsuchikane, K. and Fujita, N. and Ezaki, T.}, title = {Phylogenetics of family \textit{Enterobacteriaceae} and proposal to reclassify \textit{Escherichia hermannii} and \textit{Salmonella subterranea} as \textit{Atlantibacter hermannii} and \textit{Atlantibacter subterranea} gen. nov., comb. nov.}, abstract = {Multilocus sequence analysis based on hypervariable housekeeping proteins was utilized to differentiate closely related species in the family \textit{Enterobacteriaceae}. Of 150 housekeeping proteins, the top 10 hypervariable proteins were selected and concatenated to obtain distance data. Distances between concatenated proteins within the family were 0.9-41.2%, whereas the 16S rRNA and atpD-gyrB-infB-rpoB concatenated sequence (4MLSA) distances were 0.8-6.0% and 0.9-22.1%, respectively. These data indicate that phylogenetic analysis by concatenation of hypervariable proteins is a powerful tool for discriminating species in the family \textit{Enterobacteriaceae}. To confirm the discriminatory power of the 10 chosen concatenated hypervariable proteins (C10HKP), phylogenetic trees based on C10HKP, 4MLSA, and the 16S rRNA gene were constructed. Comparison of average bootstrap values among C10HKP, 4MLSA and 16S rRNA genes indicated that the C10HKP tree was the most reliable. Location via the C10HKP tree was consistent with existing assignments for almost all species in the family \textit{Enterobacteriaceae}. However, the C10HKP tree suggested that several species (including \textit{Enterobacter massiliensis}, \textit{Escherichia vulneris}, \textit{Escherichia hermannii}, and \textit{Salmonella subterranea}) should be reassigned to different clusters than those defined in previous analyses. Furthermore, \textit{E. hermannii} and \textit{S. subterranea} appeared to fall onto a branch independent from those occupied by the other \textit{Enterobacteriaceae}. Therefore, we propose \textit{Atlantibacter} gen. nov., such that \textit{E. hermannii} and \textit{S. subterranea} would be transferred to genus \textit{Atlantibacter} as \textit{Atlantibacter hermannii}, comb. nov. and \textit{Atlantibacter subterranea}. comb. nov., respectively.}, doi = {10.1111/1348-0421.12374}, issue = {5}, pmid = {26970508} } @article{ShelobolinaEtAl2004b, year = {2004}, journal = {Appl Environ Microbiol}, volume = {70}, pages = {2959-2965}, author = {Shelobolina, E.S. and Sullivan, S.A. and O'Neill, K.R. and Nevin, K.P. and Lovley, D.R.}, title = {Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant \textit{Bacterium} from Low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of \textit{Salmonella subterranea} sp. nov.}, abstract = {A facultatively anaerobic, acid-resistant bacterium, designated strain FRCl, was isolated from a low-pH, nitrate- and U(VI)-contaminated subsurface sediment at site FW-024 at the Natural and Accelerated Bioremediation Research Field Research Center in Oak Ridge, Tenn. Strain FRCl was enriched at pH 4.5 in minimal medium with nitrate as the electron acceptor, hydrogen as the electron donor, and acetate as the carbon source. Clones with 16S ribosomal DNA (rDNA) sequences identical to the sequence of strain FRCl were also detected in a U(VI)-reducing enrichment culture derived from the same sediment. Cells of strain FRCl were gram-negative motile regular rods 2.0 to 3.4 micro m long and 0.7 to 0.9 microm in diameter. Strain FRCl was positive for indole production, by the methyl red test, and for ornithine decarboxylase; it was negative by the Voges-Proskauer test (for acetylmethylcarbinol production), for urea hydrolysis, for arginine dihydrolase, for lysine decarboxylase, for phenylalanine deaminase, for H(2)S production, and for gelatin hydrolysis. Strain FRCl was capable of using O(2), NO(3)(-), S(2)O(3)(2-), fumarate, and malate as terminal electron acceptors and of reducing U(VI) in the cell suspension. Analysis of the 16S rDNA sequence of the isolate indicated that this strain was 96.4% similar to \textit{Salmonella bongori} and 96.3% similar to \textit{Enterobacter cloacae}. Physiological and phylogenetic analyses suggested that strain FRCl belongs to the genus \textit{Salmonella} and represents a new species, \textit{Salmonella subterranea} sp. nov.}, doi = {10.1128/aem.70.5.2959-2965.2004}, issue = {5}, pmid = {15128557} } @article{LeminorEtAl1982a, year = {1982}, journal = {Ann. Microbiol.}, volume = {133B}, pages = {245-254}, author = {Le Minor, L. and Véron, M. and Popoff, M.}, title = {Proposition pour une nomenclature des \textit{Salmonella}.} } @article{Smith1894a, year = {1894}, journal = {Bulletin of the United States Bureau of Animal Industry}, volume = {6}, pages = {6-40}, author = {Smith, T.}, title = {The hog-cholera group of bacteria.} } @article{Weldin1927a, year = {1927}, journal = {Iowa State Journal of Science}, volume = {1}, pages = {121-197}, author = {Weldin, J.C.}, title = {The colon-typhoid group of bacteria and related forms. Relationships and classification.} } @article{HardoimEtAl2013a, year = {2013}, journal = {BMC Microbiol}, volume = {13}, pages = {164}, author = {Hardoim, P.R. and Nazir, R. and Sessitsch, A. and Elhottova, D. and Korenblum, E. and van Overbeek, L.S. and van Elsas, J.D.}, title = {The new species \textit{Enterobacter oryziphilus} sp. nov. and \textit{Enterobacter oryzendophyticus} sp. nov. are key inhabitants of the endosphere of rice.}, abstract = {BACKGROUND: Six independent Gram-negative, facultatively anaerobic, non-spore-forming, nitrogen-fixing rod-shaped isolates were obtained from the root endosphere of rice grown at the International Rice Research Institute (IRRI) and investigated in a polyphasic taxonomic study. RESULTS: The strains produced fatty acid patterns typical for members of the family \textit{Enterobacteriaceae}. Comparative sequence analyses of the 16S rRNA as well as rpoB genes allocated the strains to two well-defined groups within the genus \textit{Enterobacter}, family \textit{Enterobacteriaceae}. The analyses indicated \textit{Enterobacter radicincitans}, \textit{Enterobacter arachidis} and \textit{Enterobacter oryzae} to be the closest related species. An RpoB (translated) protein comparison supported the placement in the genus \textit{Enterobacter} and the relatedness of our isolates to the aforementioned species. Genomic DNA:DNA hybridization analyses and biochemical analyses provided further evidence that the novel strains belong to two new species within the genus \textit{Enterobacter}. The two species can be differentiated from each other and from existing enteric species by acid production from L-rhamnose and D-melibiose, decarboxylation of ornithine and utilization of D-alanine, D-raffinose L-proline and L-aspartic acid, among other characteristics. Members of both species revealed capacities to colonise rice roots, including plant-growth-promoting capabilities such as an active supply of fixed nitrogen to the plant and solubilisation of inorganic phosphorus, next to traits allowing adaptation to the plant. CONCLUSIONS: Two novel proposed enterobacterial species, denominated \textit{Enterobacter oryziphilus} sp. nov. (type strain REICA_142\textsuperscript{T}=LMG 26429\textsuperscript{T}=NCCB 100393\textsuperscript{T}) and \textit{Enterobacter oryzendophyticus} sp. nov. (type strain REICA_082\textsuperscript{T}=LMG 26432\textsuperscript{T} =NCCB 100390\textsuperscript{T}) were isolated from rice roots. Both species are capable of promoting rice growth by supplying nitrogen and phosphorus.}, doi = {10.1186/1471-2180-13-164}, pmid = {23865888} } @article{LiEtAl2016t, year = {2016}, journal = {Int J Syst Evol Microbiol}, volume = {66}, pages = {2780-2783}, author = {Li, C.Y. and Zhou, Y.L. and Ji, J. and Gu, C.T.}, title = {Reclassification of \textit{Enterobacter oryziphilus} and \textit{Enterobacter oryzendophyticus} as \textit{Kosakonia oryziphila} comb. nov. and \textit{Kosakonia oryzendophytica} comb. nov.}, abstract = {The taxonomic positions of \textit{Enterobacter oryziphilus} and \textit{Enterobacter oryzendophyticus} were re-examined on the basis of concatenated partial rpoB, atpD, gyrB and infB gene sequence analysis. The reconstructed phylogenetic tree based upon concatenated partial rpoB, atpD, gyrB and infB gene sequences clearly showed that \textit{E. oryziphilus} and \textit{E. oryzendophyticus} and all defined species of the genus \textit{Kosakonia} form a clade separate from other genera of the family \textit{Enterobacteriaceae}, and, therefore, these species of the genus \textit{Enterobacter} should be transferred to the genus \textit{Kosakonia}. \textit{E. oryziphilus} and \textit{E. oryzendophyticus} are reclassified as \textit{K. oryziphila} comb. nov. (type strain REICA_142T=LMG 26429T=NCCB 100393T) and \textit{K. oryzendophytica} comb. nov. (type strain REICA_082T=LMG 26432T=NCCB 100390T), respectively.}, doi = {10.1099/ijsem.0.001054}, issue = {8}, pmid = {27045188} } @article{HoffmannEtAl2005a, year = {2005}, journal = {Syst Appl Microbiol}, volume = {28}, pages = {196-205}, author = {Hoffmann, H. and Stindl, S. and Ludwig, W. and Stumpf, A. and Mehlen, A. and Heesemann, J. and Monget, D. and Schleifer, K.H. and Roggenkamp, A.}, title = {Reassignment of enterobacter dissolvens to \textit{Enterobacter cloacae} as \textit{E. cloacae} subspecies dissolvens comb. nov. and emended description of \textit{Enterobacter asburiae} and \textit{Enterobacter kobei}.}, abstract = {The taxonomic position of \textit{Enterobacter dissolvens} was re-evaluated based on the analysis of the type strain ATCC 23373T and three clinical isolates. The strains were assigned to the genetic cluster of the species by phylogenetic sequence analysis in the frame of a recent population genetic study. The relatedness of E. dissolves to the other species of the \textit{E. cloacae} complex was analyzed by DNA-DNA hybridization studies based on melting profiles in microplates. The genetic cluster of \textit{E. dissolvens} fell into the same DNA-relatedness group like \textit{E. cloacae} with mean deltaTm-values of 3.9 degrees C confirming the hybridization results of three former studies. Phenotypic analysis of the \textit{E. cloacae} and \textit{E. dissolvens} strains, respectively, based on 115 biochemical reactions yielded the esculin test as the only one differentiating between them by being positive for \textit{E. dissolvens} and negative for \textit{E. cloacae} strains. The name \textit{E. cloacae} subsp. \textit{dissolvens} comb. nov. is proposed for the group of organisms formerly referred to as \textit{E. dissolvens}, and the name \textit{E. cloacae} subsp. \textit{cloacae} comb. nov. for the group of organisms formerly referred to as \textit{E. cloacae}. The species descriptions of \textit{Enterobacter kobei} and \textit{Enterobacter asburiae} were emended based on the data collected on 17 and 15 strains, respectively. The strains were assigned to the respective species by a combination of phylogenetic sequence analyzes and DNA-DNA hybridizations. Phenotypic analyzes of 115 reactions gave detailed species profiles with new differentiating phenotypic properties.}, doi = {10.1016/j.syapm.2004.12.010}, issue = {3}, pmid = {15900966} } @article{HormaecheEdwards1960a, year = {1960}, journal = {International Bulletin of Bacteriological Nomenclature and Taxonomy}, volume = {10}, pages = {71-74}, author = {Hormaeche, E. and Edwards, P.R.}, title = {A proposed genus \textit{Enterobacter}.}, doi = {10.1099/0096266x-10-2-71} } @book{CastellaniChalmers1919s, author = {Castellani, A. and Chalmers, A.J.}, year = {1919}, title = {A Manual of Tropical Medicine. 3rd ed}, publisher = {William Wood and Co}, address = {New York} } @book{LehmannNeumann1896b, author = {Lehmann, K.B. and Neumann, R.}, year = {1896}, title = {Atlas und Grundriss der Bakteriologie und Lehrbuch der speziellen bakteriologischen Diagnostik. Teil 2: Text, 1st ed.}, publisher = {J.F. Lehmann}, address = {München} } @incollection{Jordan1890a, year = {1890}, booktitle = {A report of the biological work of the Lawrence Experiment Station, including an account of methods employed and results obtained in the microscopical and bacteriological investigation of sewage and water. Report on water supply and sewerage (Part II). Report of the Massachusetts Board of Public Health}, publisher = {Massachusetts Board of Public Health}, address = {Boston}, editor = {Sedgewick, W.T.}, author = {Jordan, E.O.}, title = {A report on certain species of bacteria observed in sewage.}, pages = {821-844} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @article{Loeffler1892a, year = {1892}, journal = {Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene, Abteilung I}, volume = {11}, pages = {129-141}, author = {Loeffler, F.}, title = {Über Epidemieen unter den im hygienischen Institut zu Greifswald gehaltenen Mäusen und über die Bekämpfung der Feldmausplage.} } @book{CastellaniChalmers1919a, author = {Castellani, A. and Chalmers, A.J.}, year = {1919}, title = {Manual of Tropical Medicine, 3rd ed.}, publisher = {Williams Wood and Co.}, address = {New York} } @article{Gaertner1888b, year = {1888}, journal = {Korrespondenzblatt des Allgemeinen ärztlichen Vereins von Thüringen}, volume = {17}, pages = {573-600}, author = {Gaertner, E.}, title = {Über die Fleischvergiftung in Frankenhausen a. Kyffh. und der Erreger derselben.} } @book{CastellaniChalmers1919a, author = {Castellani, A. and Chalmers, A.J.}, year = {1919}, title = {Manual of Tropical Medicine, 3rd ed.}, publisher = {Williams Wood and Co.}, address = {New York} } @article{Loeffler1892a, year = {1892}, journal = {Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene, Abteilung I}, volume = {11}, pages = {129-141}, author = {Loeffler, F.}, title = {Über Epidemieen unter den im hygienischen Institut zu Greifswald gehaltenen Mäusen und über die Bekämpfung der Feldmausplage.} } @book{CastellaniChalmers1919a, author = {Castellani, A. and Chalmers, A.J.}, year = {1919}, title = {Manual of Tropical Medicine, 3rd ed.}, publisher = {Williams Wood and Co.}, address = {New York} } @article{Levine1920a, year = {1920}, journal = {Journal of Infectious Diseases}, volume = {27}, pages = {31-39}, author = {Levine, M.}, title = {Dysentery and allied bacilli.}, doi = {10.1093/infdis/27.1.31} } @article{Weldin1927a, year = {1927}, journal = {Iowa State Journal of Science}, volume = {1}, pages = {121-197}, author = {Weldin, J.C.}, title = {The colon-typhoid group of bacteria and related forms. Relationships and classification.} } @article{LeminorEtAl1982a, year = {1982}, journal = {Ann. Microbiol.}, volume = {133B}, pages = {245-254}, author = {Le Minor, L. and Véron, M. and Popoff, M.}, title = {Proposition pour une nomenclature des \textit{Salmonella}.} } @article{LeminorPopoff1987a, year = {1987}, journal = {Int. J. Syst. Bacteriol.}, volume = {37}, pages = {465-468}, author = {Le Minor, L. and Popoff, M.Y.}, title = {Request for an Opinion. Designation of \textit{Salmonella enterica} sp. nov., nom. rev., as the type and only species of the genus \textit{Salmonella}.}, doi = {10.1099/00207713-37-4-465}, issue = {4} } @article{ReevesEtAl1989a, year = {1989}, journal = {J Clin Microbiol}, volume = {27}, pages = {313-320}, author = {Reeves, M.W. and Evins, G.M. and Heiba, A.A. and Plikaytis, B.D. and Farmer, J.J.}, title = {Clonal nature of \textit{Salmonella typhi} and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis, and proposal of \textit{Salmonella bongori} comb. nov.}, abstract = {Crude cell extracts of 26 isolates of \textit{Salmonella} serotype typhi (\textit{S. typhi}) and 48 other \textit{Salmonella} isolates representing 28 serotypes and seven DNA hybridization subgroups were analyzed for electrophoretic variants of 24 metabolic enzymes by starch gel electrophoresis. All strains of \textit{S. typhi} had identical isoenzyme patterns, indicating that they were a single clone. All of the enzymes detected in the remaining strains were polymorphic, and the degree of genetic variation was quite high. The average number of alleles per enzyme locus was 4.7, and the mean genetic diversity per locus was 0.556. Thirty-two distinct allele profiles, or electrophoretic types (ETs), were found in these 48 strains of \textit{Salmonella} serotypes other than \textit{S. typhi}. Analysis of the genetic relationships of the ETs to each other showed that, with one exception, the ETs formed subgroups that were consistent with the subgroupings based on DNA hybridization studies. ET profiles were not always linked to specific serologic patterns. These data show that multilocus enzyme electrophoresis has a potential application in epidemiologic and taxonomic studies of salmonellae, although it is not differential for \textit{S. typhi}. We also propose a new species, \textit{Salmonella bongori} comb. nov., a new combination base on the elevation of \textit{Salmonella choleraesuis} subsp. \textit{bongori} to the level of species.}, doi = {10.1128/jcm.27.2.313-320.1989}, issue = {2}, pmid = {2915026} }