Type Strain Genome Server

Results 6d4dfe5e-decf-41d5-b14f-82efc2c9cdc9 Terms of Usage

Quick overview on input data and settings used for this job:

Selected TYGS mode:
default mode (TYGS automatically determined strains most closely related to the user strains)

Strains or INSDC accessions provided by user:
ADTR01000001-ADTR01000540 ADUC01000001-ADUC01000445 AEME00000000 AP009048 BA000007 BAFF01000001-BAFF01000044 CM001142 CP000034 CP000970 CP001560 CP002211 CP002212 CU928158 CU928161 CU928163 CU928164 ABHT01000001-ABHT01000250 ABKX01000001-ABKX01000064 ADAY01000001-ADAY01000168 ADBC01000001-ADBC01000229 ADTJ01000001-ADTJ01000564 ADTP01000001-ADTP01000425

Note: All details on the involved strains and their metadata are found in below Table 4

Download PDF Report Identification Trees Pairwise comparisons Strains Methods

Table 1: Phylogenies
Figure View tree No. strains Average branch support δ statistics Download tree
Figure 1: GBDP tree (16S rDNA gene sequence-based) 51 62.6 % 0.298
Figure 2: GBDP tree (whole-genome sequence-based) 52 66.4 % 0.151
Table 2: Identification
  • Your strain 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) belongs to species Escherichia hermannii.
  • Your strain 'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) belongs to species Escherichia albertii.
  • Your strain 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli str. K-12 substr. W3110' (AP009048) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli O157:H7 str. Sakai' (BA000007) belongs to species Escherichia coli.
  • Your strain 'Shigella dysenteriae Sd197' (CP000034) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli SMS-3-5' (CP000970) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli str. 'clone D i2'' (CP002211) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli str. 'clone D i14'' (CP002212) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli S88' (CU928161) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli UMN026' (CU928163) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli IAI39' (CU928164) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli H299' (ADBC01000001-ADBC01000229) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) belongs to species Escherichia coli.
  • Your strain 'Escherichia sp. TW09308' (AEME00000000) belongs to species Escherichia marmotae.
  • Your strain 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) belongs to species Shimwellia blattae.
  • Your strain 'Escherichia fergusonii ECD227' (CM001142) belongs to species Escherichia fergusonii.
  • Your strain 'Escherichia fergusonii ATCC 35469' (CU928158) belongs to species Escherichia fergusonii.

OverallRegarding your genomes
Table 3: Pairwise comparisons of user genomes vs. type strain genomes

Your genomes are printed in bold-face and the table is ordered by recommended () dDDH formula d4 in descending order (d4 is identical to GGDC formula 2) . Hold SHIFT key and click column headers if you want to order by multiple criteria.

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Query strain Subject strain dDDH (d0, in %) C.I. (d0, in %) dDDH (d4, in %) C.I. (d4, in %) dDDH (d6, in %) C.I. (d6, in %) G+C content difference (in %)
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shimwellia blattae DSM 4481 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 0.0
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli str. 'clone D i14'' (CP002212) 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 0.0
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia fergusonii ATCC 35469 99.9 [99.7 - 99.9] 99.7 [99.5 - 99.8] 99.9 [99.9 - 100.0] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 98.6 [97.5 - 99.2] 99.6 [99.3 - 99.7] 99.3 [98.8 - 99.6] 0.04
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli UMN026' (CU928163) 95.4 [93.2 - 96.9] 99.3 [98.9 - 99.5] 97.5 [96.2 - 98.3] 0.05
'Escherichia coli S88' (CU928161) Escherichia coli DSM 30083 98.6 [97.5 - 99.2] 99.2 [98.7 - 99.5] 99.3 [98.8 - 99.6] 0.04
'Shigella dysenteriae Sd197' (CP000034) Shigella dysenteriae ATCC 13313 98.8 [97.8 - 99.3] 98.9 [98.4 - 99.3] 99.4 [98.9 - 99.6] 0.27
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia hermannii NCTC 12129 100.0 [100.0 - 100.0] 95.7 [94.3 - 96.8] 99.9 [99.9 - 100.0] 0.0
'Escherichia sp. TW09308' (AEME00000000) Escherichia marmotae HT073016 81.2 [77.3 - 84.6] 94.2 [92.5 - 95.6] 86.3 [83.2 - 88.9] 0.04
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli str. 'clone D i2'' (CP002211) 91.4 [88.4 - 93.7] 91.3 [89.2 - 93.1] 93.8 [91.6 - 95.4] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli str. 'clone D i14'' (CP002212) 91.4 [88.4 - 93.7] 91.3 [89.2 - 93.1] 93.8 [91.6 - 95.4] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia coli DSM 30083 85.6 [81.9 - 88.7] 90.3 [88.0 - 92.2] 89.2 [86.4 - 91.5] 0.16
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli S88' (CU928161) 85.8 [82.2 - 88.8] 90.3 [88.0 - 92.1] 89.4 [86.6 - 91.7] 0.19
'Escherichia fergusonii ECD227' (CM001142) Escherichia fergusonii ATCC 35469 92.8 [90.0 - 94.8] 90.1 [87.8 - 92.0] 94.6 [92.6 - 96.1] 0.09
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia fergusonii ATCC 35469' (CU928158) 93.7 [91.1 - 95.6] 90.1 [87.8 - 92.0] 95.3 [93.4 - 96.6] 0.07
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia coli DSM 30083 87.0 [83.4 - 89.9] 90.0 [87.7 - 91.9] 90.2 [87.5 - 92.4] 0.08
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia coli DSM 30083 87.0 [83.4 - 89.9] 90.0 [87.7 - 91.9] 90.2 [87.5 - 92.4] 0.08
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia coli S88' (CU928161) 86.5 [82.9 - 89.4] 89.8 [87.4 - 91.7] 89.8 [87.0 - 92.0] 0.12
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli S88' (CU928161) 86.5 [82.9 - 89.4] 89.8 [87.4 - 91.7] 89.8 [87.0 - 92.0] 0.12
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli UMN026' (CU928163) 88.2 [84.8 - 91.0] 89.1 [86.7 - 91.1] 91.1 [88.5 - 93.1] 0.14
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 83.5 [79.7 - 86.7] 88.6 [86.2 - 90.7] 87.3 [84.2 - 89.8] 0.09
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli IAI39' (CU928164) 79.3 [75.3 - 82.7] 87.0 [84.4 - 89.2] 83.5 [80.2 - 86.3] 0.24
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella sonnei ATCC 29930 78.4 [74.4 - 81.9] 86.5 [83.9 - 88.8] 82.7 [79.4 - 85.6] 0.21
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella boydii ATCC 8700 74.8 [70.8 - 78.4] 86.5 [83.9 - 88.8] 79.5 [76.1 - 82.6] 0.32
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli SMS-3-5' (CP000970) 78.9 [74.9 - 82.4] 86.4 [83.8 - 88.7] 83.1 [79.8 - 85.9] 0.1
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 84.5 [80.7 - 87.6] 85.4 [82.7 - 87.7] 87.6 [84.6 - 90.0] 0.2
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli IAI39' (CU928164) 83.1 [79.2 - 86.3] 85.1 [82.4 - 87.5] 86.3 [83.2 - 88.9] 0.13
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 82.2 [78.3 - 85.5] 85.0 [82.3 - 87.4] 85.6 [82.5 - 88.3] 0.29
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli UMN026' (CU928163) 84.1 [80.3 - 87.2] 85.0 [82.3 - 87.4] 87.2 [84.1 - 89.7] 0.34
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella flexneri ATCC 29903 73.4 [69.5 - 77.1] 84.9 [82.2 - 87.3] 78.1 [74.6 - 81.2] 0.13
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Shigella dysenteriae Sd197' (CP000034) 62.5 [58.7 - 66.0] 84.0 [81.2 - 86.4] 67.7 [64.3 - 70.9] 0.71
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella dysenteriae ATCC 13313 61.2 [57.5 - 64.8] 83.9 [81.1 - 86.3] 66.5 [63.1 - 69.7] 0.44
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Shigella dysenteriae Sd197' (CP000034) 57.4 [53.8 - 60.9] 83.4 [80.6 - 85.8] 62.6 [59.3 - 65.8] 0.67
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella dysenteriae ATCC 13313 56.9 [53.3 - 60.4] 83.1 [80.3 - 85.6] 62.1 [58.8 - 65.3] 0.41
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 72.7 [68.7 - 76.3] 83.0 [80.2 - 85.5] 77.1 [73.6 - 80.2] 0.26
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 65.9 [62.1 - 69.6] 82.7 [79.8 - 85.2] 70.8 [67.4 - 74.1] 0.22
'Shigella dysenteriae Sd197' (CP000034) Shigella sonnei ATCC 29930 69.4 [65.5 - 73.1] 82.6 [79.8 - 85.1] 74.1 [70.6 - 77.3] 0.24
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Shigella dysenteriae Sd197' (CP000034) 68.7 [64.9 - 72.4] 82.5 [79.7 - 85.1] 73.4 [70.0 - 76.6] 0.45
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella dysenteriae ATCC 13313 66.2 [62.4 - 69.9] 82.5 [79.7 - 85.0] 71.1 [67.6 - 74.3] 0.18
'Shigella dysenteriae Sd197' (CP000034) Shigella boydii ATCC 8700 70.7 [66.8 - 74.4] 81.0 [78.1 - 83.6] 75.0 [71.5 - 78.2] 0.13
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella boydii ATCC 8700 64.4 [60.6 - 68.0] 80.8 [77.9 - 83.4] 69.1 [65.6 - 72.3] 0.58
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella flexneri ATCC 29903 63.7 [59.9 - 67.3] 80.1 [77.2 - 82.8] 68.3 [64.9 - 71.5] 0.13
'Shigella dysenteriae Sd197' (CP000034) Shigella flexneri ATCC 29903 72.4 [68.4 - 76.0] 80.0 [77.1 - 82.7] 76.3 [72.9 - 79.5] 0.58
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia albertii NBRC 107761 99.8 [99.6 - 99.9] 79.9 [77.0 - 82.6] 99.0 [98.3 - 99.4] 0.1
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 71.7 [67.8 - 75.4] 79.7 [76.8 - 82.4] 75.7 [72.2 - 78.8] 0.18
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli IAI39' (CU928164) 78.3 [74.4 - 81.8] 79.7 [76.7 - 82.3] 81.4 [78.1 - 84.4] 0.04
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella boydii ATCC 8700 60.3 [56.6 - 63.9] 79.6 [76.7 - 82.3] 65.0 [61.6 - 68.2] 0.54
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli SMS-3-5' (CP000970) 81.9 [78.0 - 85.2] 79.6 [76.7 - 82.3] 84.5 [81.2 - 87.2] 0.08
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli str. 'clone D i14'' (CP002212) 79.1 [75.2 - 82.6] 79.5 [76.6 - 82.2] 82.1 [78.8 - 85.0] 0.19
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 71.9 [67.9 - 75.6] 79.5 [76.5 - 82.2] 75.8 [72.3 - 79.0] 0.38
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli str. 'clone D i2'' (CP002211) 79.1 [75.2 - 82.6] 79.5 [76.6 - 82.2] 82.1 [78.8 - 85.0] 0.19
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli SMS-3-5' (CP000970) 81.6 [77.7 - 84.9] 79.5 [76.5 - 82.1] 84.2 [80.9 - 86.9] 0.12
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli IAI39' (CU928164) 80.3 [76.4 - 83.7] 79.4 [76.5 - 82.1] 83.1 [79.8 - 85.9] 0.26
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella sonnei ATCC 29930 70.3 [66.4 - 74.0] 79.4 [76.4 - 82.1] 74.4 [70.9 - 77.6] 0.48
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 76.4 [72.4 - 79.9] 79.4 [76.4 - 82.0] 79.7 [76.3 - 82.7] 0.02
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 75.0 [71.0 - 78.6] 79.4 [76.5 - 82.1] 78.5 [75.1 - 81.6] 0.18
'Escherichia coli UMN026' (CU928163) 'Escherichia coli IAI39' (CU928164) 79.5 [75.5 - 82.9] 79.3 [76.4 - 82.0] 82.4 [79.0 - 85.3] 0.09
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 76.6 [72.7 - 80.2] 79.3 [76.4 - 82.0] 79.9 [76.5 - 83.0] 0.13
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia coli DSM 30083 82.0 [78.1 - 85.3] 79.1 [76.2 - 81.8] 84.5 [81.2 - 87.2] 0.11
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli UMN026' (CU928163) 79.6 [75.6 - 83.1] 79.1 [76.2 - 81.8] 82.4 [79.1 - 85.3] 0.08
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 75.5 [71.5 - 79.1] 79.1 [76.1 - 81.8] 78.9 [75.5 - 82.0] 0.27
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli UMN026' (CU928163) 73.2 [69.3 - 76.9] 79.0 [76.0 - 81.7] 76.9 [73.4 - 80.0] 0.04
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 73.6 [69.6 - 77.2] 78.9 [76.0 - 81.6] 77.2 [73.7 - 80.3] 0.09
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli S88' (CU928161) 79.3 [75.4 - 82.8] 78.9 [76.0 - 81.6] 82.2 [78.8 - 85.1] 0.07
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella flexneri ATCC 29903 59.3 [55.6 - 62.8] 78.9 [76.0 - 81.6] 63.9 [60.5 - 67.1] 0.09
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli UMN026' (CU928163) 76.6 [72.6 - 80.1] 78.9 [75.9 - 81.6] 79.8 [76.4 - 82.8] 0.32
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 79.8 [75.8 - 83.2] 78.8 [75.9 - 81.5] 82.5 [79.2 - 85.4] 0.27
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli IAI39' (CU928164) 78.2 [74.2 - 81.7] 78.8 [75.8 - 81.4] 81.1 [77.8 - 84.1] 0.06
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 77.5 [73.5 - 81.1] 78.6 [75.7 - 81.3] 80.6 [77.2 - 83.6] 0.42
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella sonnei ATCC 29930 65.5 [61.7 - 69.1] 78.5 [75.6 - 81.2] 69.8 [66.3 - 73.0] 0.44
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia coli DSM 30083 72.9 [68.9 - 76.5] 78.5 [75.5 - 81.1] 76.5 [73.0 - 79.7] 0.25
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli IAI39' (CU928164) 72.5 [68.6 - 76.2] 78.4 [75.4 - 81.1] 76.2 [72.7 - 79.3] 0.12
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 71.1 [67.1 - 74.7] 78.4 [75.4 - 81.1] 74.8 [71.4 - 78.0] 0.09
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli SMS-3-5' (CP000970) 77.7 [73.7 - 81.2] 78.3 [75.3 - 81.0] 80.6 [77.2 - 83.6] 0.17
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella boydii ATCC 8700 65.5 [61.7 - 69.1] 78.2 [75.2 - 80.9] 69.7 [66.3 - 72.9] 0.45
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli SMS-3-5' (CP000970) 74.3 [70.3 - 77.9] 78.2 [75.3 - 80.9] 77.7 [74.2 - 80.8] 0.26
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 81.5 [77.6 - 84.9] 78.2 [75.3 - 80.9] 83.9 [80.6 - 86.7] 0.22
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli UMN026' (CU928163) 78.9 [74.9 - 82.4] 78.2 [75.3 - 80.9] 81.7 [78.3 - 84.6] 0.22
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli S88' (CU928161) 73.3 [69.4 - 77.0] 78.0 [75.0 - 80.7] 76.8 [73.3 - 79.9] 0.29
'Escherichia coli UMN026' (CU928163) Shigella boydii ATCC 8700 66.7 [62.8 - 70.3] 78.0 [75.0 - 80.7] 70.8 [67.3 - 74.0] 0.4
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 71.8 [67.8 - 75.4] 77.9 [74.9 - 80.6] 75.4 [71.9 - 78.6] 0.36
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli IAI39' (CU928164) 75.9 [71.9 - 79.4] 77.7 [74.7 - 80.4] 79.0 [75.5 - 82.0] 0.17
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli str. 'clone D i2'' (CP002211) 70.9 [67.0 - 74.6] 77.6 [74.7 - 80.4] 74.6 [71.1 - 77.8] 0.17
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia coli IAI39' (CU928164) 75.4 [71.5 - 79.0] 77.6 [74.6 - 80.3] 78.6 [75.1 - 81.7] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli IAI39' (CU928164) 73.9 [69.9 - 77.5] 77.6 [74.6 - 80.3] 77.2 [73.8 - 80.4] 0.14
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli IAI39' (CU928164) 75.4 [71.5 - 79.0] 77.6 [74.6 - 80.3] 78.6 [75.1 - 81.7] 0.07
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli str. 'clone D i14'' (CP002212) 70.9 [67.0 - 74.6] 77.6 [74.7 - 80.4] 74.6 [71.1 - 77.8] 0.17
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella boydii ATCC 8700 65.0 [61.2 - 68.7] 77.6 [74.6 - 80.3] 69.2 [65.7 - 72.4] 0.54
'Escherichia coli UMN026' (CU928163) Shigella sonnei ATCC 29930 72.1 [68.2 - 75.8] 77.4 [74.4 - 80.1] 75.6 [72.2 - 78.8] 0.3
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella flexneri ATCC 29903 64.8 [61.0 - 68.4] 77.3 [74.3 - 80.0] 68.9 [65.5 - 72.2] 0.09
'Escherichia coli IAI39' (CU928164) Shigella sonnei ATCC 29930 70.0 [66.1 - 73.7] 77.3 [74.3 - 80.0] 73.7 [70.3 - 76.9] 0.38
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli UMN026' (CU928163) 64.7 [60.9 - 68.3] 77.2 [74.2 - 79.9] 68.8 [65.4 - 72.0] 0.53
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 73.0 [69.1 - 76.7] 77.2 [74.2 - 80.0] 76.4 [72.9 - 79.6] 0.05
'Escherichia coli SMS-3-5' (CP000970) Escherichia coli DSM 30083 75.6 [71.6 - 79.2] 77.2 [74.2 - 79.9] 78.6 [75.2 - 81.7] 0.15
'Escherichia coli UMN026' (CU928163) Shigella dysenteriae ATCC 13313 62.9 [59.1 - 66.5] 77.2 [74.2 - 79.9] 67.1 [63.7 - 70.3] 0.26
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella sonnei ATCC 29930 68.7 [64.8 - 72.3] 77.1 [74.1 - 79.9] 72.5 [69.0 - 75.7] 0.64
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella flexneri ATCC 29903 65.7 [61.9 - 69.3] 77.1 [74.1 - 79.8] 69.7 [66.3 - 73.0] 0.0
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella boydii ATCC 8700 62.5 [58.8 - 66.1] 77.1 [74.1 - 79.9] 66.8 [63.4 - 70.0] 0.74
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella sonnei ATCC 29930 68.7 [64.8 - 72.4] 77.0 [74.0 - 79.7] 72.5 [69.0 - 75.7] 0.44
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 71.4 [67.4 - 75.0] 77.0 [74.0 - 79.7] 74.9 [71.4 - 78.1] 0.41
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella dysenteriae ATCC 13313 59.9 [56.2 - 63.4] 77.0 [74.0 - 79.8] 64.2 [60.8 - 67.4] 0.41
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Shigella dysenteriae Sd197' (CP000034) 62.4 [58.7 - 66.0] 77.0 [74.0 - 79.7] 66.6 [63.2 - 69.8] 0.67
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella sonnei ATCC 29930 69.1 [65.2 - 72.8] 76.9 [73.9 - 79.6] 72.8 [69.4 - 76.1] 0.26
'Escherichia coli S88' (CU928161) 'Escherichia coli IAI39' (CU928164) 77.6 [73.6 - 81.1] 76.9 [73.9 - 79.7] 80.3 [76.9 - 83.3] 0.05
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli S88' (CU928161) 75.1 [71.1 - 78.7] 76.9 [73.9 - 79.7] 78.2 [74.7 - 81.3] 0.18
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli SMS-3-5' (CP000970) 79.1 [75.2 - 82.6] 76.9 [73.9 - 79.7] 81.6 [78.3 - 84.6] 0.3
'Escherichia coli SMS-3-5' (CP000970) Shigella sonnei ATCC 29930 70.6 [66.7 - 74.3] 76.9 [74.0 - 79.7] 74.2 [70.7 - 77.4] 0.52
'Escherichia coli IAI39' (CU928164) Escherichia coli DSM 30083 75.7 [71.7 - 79.3] 76.8 [73.8 - 79.6] 78.7 [75.2 - 81.8] 0.01
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Shigella dysenteriae Sd197' (CP000034) 60.4 [56.8 - 64.0] 76.8 [73.8 - 79.5] 64.7 [61.3 - 67.9] 0.5
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Shigella dysenteriae Sd197' (CP000034) 59.7 [56.1 - 63.3] 76.7 [73.7 - 79.4] 64.0 [60.6 - 67.2] 0.87
'Escherichia coli IAI39' (CU928164) Shigella boydii ATCC 8700 68.3 [64.4 - 71.9] 76.7 [73.7 - 79.5] 72.0 [68.6 - 75.3] 0.49
'Escherichia coli UMN026' (CU928163) Shigella flexneri ATCC 29903 67.7 [63.8 - 71.4] 76.7 [73.7 - 79.4] 71.5 [68.0 - 74.7] 0.05
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella dysenteriae ATCC 13313 58.0 [54.4 - 61.5] 76.6 [73.6 - 79.3] 62.3 [59.0 - 65.5] 0.61
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella flexneri ATCC 29903 64.3 [60.5 - 67.9] 76.6 [73.6 - 79.3] 68.3 [64.8 - 71.5] 0.29
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella dysenteriae ATCC 13313 59.2 [55.6 - 62.8] 76.6 [73.6 - 79.3] 63.5 [60.1 - 66.7] 0.23
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli SMS-3-5' (CP000970) 72.9 [68.9 - 76.5] 76.6 [73.6 - 79.3] 76.1 [72.7 - 79.3] 0.01
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella sonnei ATCC 29930 71.3 [67.4 - 75.0] 76.6 [73.6 - 79.3] 74.8 [71.3 - 77.9] 0.35
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Shigella dysenteriae Sd197' (CP000034) 62.1 [58.4 - 65.7] 76.4 [73.4 - 79.1] 66.2 [62.8 - 69.5] 0.58
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli str. 'clone D i2'' (CP002211) 75.3 [71.3 - 78.9] 76.3 [73.3 - 79.0] 78.2 [74.8 - 81.3] 0.06
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella dysenteriae ATCC 13313 61.0 [57.3 - 64.6] 76.3 [73.3 - 79.1] 65.2 [61.8 - 68.4] 0.31
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli str. 'clone D i14'' (CP002212) 75.3 [71.3 - 78.9] 76.3 [73.3 - 79.0] 78.2 [74.8 - 81.3] 0.06
'Escherichia coli IAI39' (CU928164) Shigella flexneri ATCC 29903 68.1 [64.2 - 71.7] 76.3 [73.3 - 79.1] 71.8 [68.3 - 75.0] 0.04
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella sonnei ATCC 29930 63.4 [59.6 - 67.0] 76.3 [73.3 - 79.1] 67.4 [64.0 - 70.7] 0.62
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella boydii ATCC 8700 65.6 [61.7 - 69.2] 76.1 [73.1 - 78.9] 69.4 [66.0 - 72.7] 0.36
'Escherichia coli IAI39' (CU928164) Shigella dysenteriae ATCC 13313 61.6 [57.9 - 65.2] 76.1 [73.1 - 78.8] 65.7 [62.3 - 68.9] 0.35
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli IAI39' (CU928164) 62.6 [58.8 - 66.1] 76.0 [73.0 - 78.8] 66.6 [63.2 - 69.8] 0.62
'Escherichia coli SMS-3-5' (CP000970) Shigella flexneri ATCC 29903 66.9 [63.0 - 70.5] 76.0 [73.0 - 78.8] 70.6 [67.1 - 73.8] 0.17
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella boydii ATCC 8700 61.3 [57.6 - 64.8] 75.9 [72.9 - 78.7] 65.3 [62.0 - 68.6] 0.72
'Escherichia coli SMS-3-5' (CP000970) Shigella boydii ATCC 8700 68.2 [64.3 - 71.8] 75.9 [72.9 - 78.7] 71.8 [68.3 - 75.0] 0.62
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli SMS-3-5' (CP000970) 63.7 [59.9 - 67.3] 75.9 [72.9 - 78.6] 67.6 [64.2 - 70.9] 0.75
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 74.2 [70.2 - 77.8] 75.9 [72.9 - 78.6] 77.1 [73.7 - 80.3] 0.04
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella flexneri ATCC 29903 60.7 [57.1 - 64.3] 75.9 [72.9 - 78.6] 64.8 [61.5 - 68.1] 0.28
'Escherichia coli SMS-3-5' (CP000970) Shigella dysenteriae ATCC 13313 62.1 [58.4 - 65.7] 75.8 [72.8 - 78.6] 66.2 [62.8 - 69.4] 0.48
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella flexneri ATCC 29903 65.1 [61.2 - 68.7] 75.5 [72.5 - 78.3] 68.8 [65.4 - 72.1] 0.08
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 74.1 [70.1 - 77.7] 75.3 [72.3 - 78.1] 77.0 [73.5 - 80.1] 0.16
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli IAI39' (CU928164) 68.6 [64.7 - 72.2] 75.3 [72.3 - 78.1] 72.0 [68.6 - 75.3] 0.09
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 70.4 [66.5 - 74.0] 75.3 [72.3 - 78.1] 73.7 [70.2 - 76.9] 0.09
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 68.0 [64.1 - 71.6] 75.3 [72.3 - 78.1] 71.5 [68.0 - 74.7] 0.18
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli str. 'clone D i14'' (CP002212) 72.5 [68.6 - 76.2] 75.2 [72.2 - 78.0] 75.6 [72.1 - 78.8] 0.18
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia coli DSM 30083 74.2 [70.3 - 77.9] 75.2 [72.2 - 78.0] 77.1 [73.6 - 80.2] 0.16
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella sonnei ATCC 29930 65.5 [61.7 - 69.2] 75.2 [72.2 - 78.0] 69.2 [65.8 - 72.5] 0.45
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli UMN026' (CU928163) 74.9 [70.9 - 78.5] 75.2 [72.1 - 77.9] 77.6 [74.2 - 80.7] 0.18
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella sonnei ATCC 29930 65.5 [61.7 - 69.2] 75.2 [72.2 - 78.0] 69.2 [65.8 - 72.5] 0.45
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 67.6 [63.7 - 71.2] 75.2 [72.1 - 77.9] 71.1 [67.6 - 74.3] 0.0
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli str. 'clone D i2'' (CP002211) 72.5 [68.6 - 76.2] 75.2 [72.2 - 78.0] 75.6 [72.1 - 78.8] 0.18
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia coli DSM 30083 73.9 [69.9 - 77.5] 75.2 [72.2 - 78.0] 76.8 [73.3 - 79.9] 0.07
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia coli DSM 30083 73.4 [69.4 - 77.0] 75.1 [72.0 - 77.8] 76.3 [72.8 - 79.5] 0.27
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 65.2 [61.4 - 68.8] 75.1 [72.1 - 77.9] 68.9 [65.5 - 72.2] 0.21
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli UMN026' (CU928163) 69.6 [65.7 - 73.2] 75.1 [72.0 - 77.8] 72.9 [69.4 - 76.1] 0.23
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli S88' (CU928161) 74.4 [70.4 - 78.0] 75.0 [72.0 - 77.8] 77.2 [73.7 - 80.3] 0.12
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli S88' (CU928161) 76.0 [72.0 - 79.6] 75.0 [72.0 - 77.8] 78.6 [75.2 - 81.7] 0.11
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 72.5 [68.5 - 76.1] 75.0 [72.0 - 77.8] 75.5 [72.0 - 78.7] 0.13
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli S88' (CU928161) 74.6 [70.6 - 78.2] 75.0 [72.0 - 77.8] 77.4 [73.9 - 80.5] 0.31
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli S88' (CU928161) 72.8 [68.8 - 76.4] 75.0 [72.0 - 77.8] 75.8 [72.3 - 78.9] 0.01
'Escherichia coli UMN026' (CU928163) Escherichia coli DSM 30083 73.9 [69.9 - 77.5] 74.9 [71.9 - 77.7] 76.7 [73.3 - 79.9] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 70.6 [66.6 - 74.2] 74.8 [71.8 - 77.6] 73.7 [70.3 - 77.0] 0.31
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli str. 'clone D i14'' (CP002212) 70.1 [66.2 - 73.8] 74.8 [71.8 - 77.6] 73.4 [69.9 - 76.6] 0.11
'Escherichia coli S88' (CU928161) 'Escherichia coli UMN026' (CU928163) 75.1 [71.2 - 78.7] 74.8 [71.8 - 77.6] 77.8 [74.4 - 80.9] 0.04
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli str. 'clone D i2'' (CP002211) 70.1 [66.2 - 73.8] 74.8 [71.8 - 77.6] 73.4 [69.9 - 76.6] 0.11
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 71.1 [67.1 - 74.7] 74.8 [71.8 - 77.6] 74.2 [70.7 - 77.4] 0.11
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia coli UMN026' (CU928163) 72.4 [68.5 - 76.1] 74.7 [71.7 - 77.5] 75.4 [71.9 - 78.6] 0.16
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella flexneri ATCC 29903 61.4 [57.7 - 65.0] 74.7 [71.7 - 77.5] 65.3 [61.9 - 68.5] 0.18
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli IAI39' (CU928164) 63.5 [59.8 - 67.1] 74.7 [71.7 - 77.5] 67.3 [63.9 - 70.5] 0.06
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 68.5 [64.6 - 72.1] 74.7 [71.7 - 77.5] 71.8 [68.4 - 75.1] 0.2
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli UMN026' (CU928163) 72.4 [68.5 - 76.1] 74.7 [71.7 - 77.5] 75.4 [71.9 - 78.6] 0.16
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli str. 'clone D i2'' (CP002211) 71.2 [67.2 - 74.8] 74.6 [71.6 - 77.4] 74.3 [70.8 - 77.5] 0.02
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli str. 'clone D i14'' (CP002212) 72.1 [68.1 - 75.7] 74.6 [71.6 - 77.4] 75.1 [71.6 - 78.3] 0.24
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli str. 'clone D i2'' (CP002211) 72.1 [68.1 - 75.7] 74.6 [71.6 - 77.4] 75.1 [71.6 - 78.3] 0.24
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli str. 'clone D i14'' (CP002212) 71.2 [67.2 - 74.8] 74.6 [71.6 - 77.4] 74.3 [70.8 - 77.5] 0.02
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia coli DSM 30083 73.8 [69.8 - 77.4] 74.6 [71.6 - 77.4] 76.6 [73.1 - 79.7] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli UMN026' (CU928163) 69.2 [65.2 - 72.8] 74.5 [71.5 - 77.3] 72.4 [69.0 - 75.7] 0.14
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella boydii ATCC 8700 61.9 [58.2 - 65.5] 74.5 [71.5 - 77.3] 65.7 [62.3 - 68.9] 0.63
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli SMS-3-5' (CP000970) 71.5 [67.5 - 75.1] 74.5 [71.5 - 77.3] 74.5 [71.0 - 77.7] 0.04
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 68.1 [64.3 - 71.8] 74.4 [71.4 - 77.2] 71.5 [68.0 - 74.7] 0.15
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli str. 'clone D i14'' (CP002212) 60.9 [57.2 - 64.5] 74.4 [71.3 - 77.2] 64.7 [61.4 - 67.9] 0.69
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli str. 'clone D i2'' (CP002211) 60.9 [57.2 - 64.5] 74.4 [71.3 - 77.2] 64.7 [61.4 - 67.9] 0.69
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Shigella dysenteriae Sd197' (CP000034) 61.3 [57.6 - 64.9] 74.3 [71.3 - 77.1] 65.1 [61.8 - 68.4] 0.86
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 67.8 [63.9 - 71.5] 74.3 [71.3 - 77.1] 71.2 [67.7 - 74.4] 0.09
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella dysenteriae ATCC 13313 59.3 [55.7 - 62.9] 74.3 [71.3 - 77.1] 63.2 [59.9 - 66.4] 0.59
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella dysenteriae ATCC 13313 59.5 [55.9 - 63.1] 74.2 [71.2 - 77.0] 63.4 [60.0 - 66.6] 0.42
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella dysenteriae ATCC 13313 59.5 [55.9 - 63.1] 74.2 [71.2 - 77.0] 63.4 [60.0 - 66.6] 0.42
'Escherichia coli S88' (CU928161) Shigella sonnei ATCC 29930 65.8 [61.9 - 69.4] 74.1 [71.1 - 76.9] 69.3 [65.8 - 72.5] 0.33
'Escherichia coli S88' (CU928161) Shigella boydii ATCC 8700 64.1 [60.3 - 67.7] 74.1 [71.1 - 76.9] 67.7 [64.3 - 70.9] 0.44
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 61.6 [57.8 - 65.1] 74.1 [71.1 - 76.9] 65.3 [62.0 - 68.5] 0.18
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli SMS-3-5' (CP000970) 65.3 [61.5 - 68.9] 74.0 [71.0 - 76.8] 68.8 [65.4 - 72.0] 0.08
'Escherichia coli S88' (CU928161) Shigella flexneri ATCC 29903 62.0 [58.3 - 65.6] 73.9 [70.9 - 76.7] 65.7 [62.3 - 68.9] 0.01
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella sonnei ATCC 29930 63.9 [60.2 - 67.5] 73.9 [70.9 - 76.7] 67.5 [64.1 - 70.8] 0.53
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella dysenteriae ATCC 13313 57.1 [53.6 - 60.7] 73.7 [70.6 - 76.5] 61.0 [57.7 - 64.2] 0.49
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 63.3 [59.5 - 66.9] 73.7 [70.6 - 76.5] 66.9 [63.5 - 70.1] 0.18
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Shigella dysenteriae Sd197' (CP000034) 58.9 [55.2 - 62.4] 73.7 [70.7 - 76.5] 62.7 [59.4 - 65.9] 0.76
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 60.9 [57.2 - 64.5] 73.6 [70.6 - 76.4] 64.6 [61.3 - 67.9] 0.05
'Shigella dysenteriae Sd197' (CP000034) Escherichia coli DSM 30083 64.0 [60.2 - 67.6] 73.5 [70.4 - 76.3] 67.5 [64.1 - 70.7] 0.61
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella flexneri ATCC 29903 64.3 [60.5 - 67.9] 73.3 [70.2 - 76.1] 67.7 [64.3 - 71.0] 0.11
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella flexneri ATCC 29903 64.3 [60.5 - 67.9] 73.3 [70.2 - 76.1] 67.7 [64.3 - 71.0] 0.11
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia coli DSM 30083 64.3 [60.5 - 67.9] 73.2 [70.2 - 76.0] 67.8 [64.4 - 71.0] 0.11
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli S88' (CU928161) 62.7 [59.0 - 66.3] 73.1 [70.1 - 75.9] 66.2 [62.9 - 69.5] 0.57
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli str. 'clone D i2'' (CP002211) 64.2 [60.4 - 67.8] 73.1 [70.1 - 76.0] 67.6 [64.2 - 70.9] 0.02
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli str. 'clone D i14'' (CP002212) 64.2 [60.4 - 67.8] 73.1 [70.1 - 75.9] 67.6 [64.2 - 70.9] 0.02
'Escherichia coli S88' (CU928161) Shigella dysenteriae ATCC 13313 60.5 [56.9 - 64.1] 73.1 [70.1 - 75.9] 64.2 [60.8 - 67.4] 0.3
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli S88' (CU928161) 65.7 [61.9 - 69.3] 73.1 [70.1 - 75.9] 69.0 [65.6 - 72.3] 0.14
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella boydii ATCC 8700 64.3 [60.5 - 67.9] 72.9 [69.9 - 75.8] 67.7 [64.3 - 70.9] 0.56
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 56.3 [52.8 - 59.8] 72.9 [69.9 - 75.7] 60.1 [56.8 - 63.3] 0.09
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella boydii ATCC 8700 64.3 [60.5 - 67.9] 72.9 [69.9 - 75.8] 67.7 [64.3 - 70.9] 0.56
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli str. 'clone D i14'' (CP002212) 59.3 [55.6 - 62.8] 72.5 [69.4 - 75.3] 62.9 [59.5 - 66.1] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli str. 'clone D i2'' (CP002211) 59.3 [55.6 - 62.8] 72.5 [69.4 - 75.3] 62.9 [59.5 - 66.1] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli S88' (CU928161) 60.8 [57.2 - 64.4] 72.4 [69.3 - 75.2] 64.4 [61.0 - 67.6] 0.11
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia coli DSM 30083 60.1 [56.4 - 63.6] 72.3 [69.3 - 75.1] 63.6 [60.3 - 66.8] 0.07
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 49.2 [46.6 - 51.9] 12.9 [10.6 - 15.7] 15.29
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 48.3 [45.7 - 50.9] 12.9 [10.6 - 15.6] 15.49
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 47.7 [45.1 - 50.3] 12.9 [10.6 - 15.7] 15.98
'Escherichia coli S88' (CU928161) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 46.8 [44.2 - 49.3] 13.0 [10.6 - 15.7] 15.18
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 46.8 [44.2 - 49.4] 12.9 [10.6 - 15.7] 15.47
'Shigella dysenteriae Sd197' (CP000034) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 46.8 [44.3 - 49.4] 13.0 [10.6 - 15.7] 14.61
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 46.7 [44.2 - 49.3] 12.9 [10.6 - 15.7] 11.79
'Escherichia coli str. K-12 substr. W3110' (AP009048) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 45.4 [42.8 - 47.9] 13.0 [10.6 - 15.7] 15.06
'Escherichia coli O157:H7 str. Sakai' (BA000007) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 45.1 [42.5 - 47.6] 13.0 [10.6 - 15.7] 15.33
'Escherichia fergusonii ATCC 35469' (CU928158) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 44.9 [42.4 - 47.5] 13.0 [10.6 - 15.7] 15.93
'Escherichia coli IAI39' (CU928164) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 44.8 [42.3 - 47.4] 13.0 [10.6 - 15.7] 15.23
'Escherichia fergusonii ECD227' (CM001142) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 44.4 [41.8 - 46.9] 12.9 [10.6 - 15.7] 15.85
'Escherichia coli SMS-3-5' (CP000970) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 44.3 [41.7 - 46.8] 13.0 [10.6 - 15.7] 15.37
'Escherichia coli UMN026' (CU928163) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 44.3 [41.8 - 46.9] 13.0 [10.6 - 15.7] 15.15
'Escherichia coli str. 'clone D i14'' (CP002212) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 44.2 [41.7 - 46.8] 13.0 [10.6 - 15.7] 15.3
'Escherichia coli str. 'clone D i2'' (CP002211) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 44.2 [41.7 - 46.8] 13.0 [10.6 - 15.7] 15.3
'Escherichia sp. TW09308' (AEME00000000) Shigella sonnei ATCC 29930 60.0 [56.3 - 63.5] 44.1 [41.6 - 46.7] 57.2 [54.0 - 60.3] 0.74
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia sp. TW09308' (AEME00000000) 63.1 [59.3 - 66.7] 44.0 [41.5 - 46.6] 59.7 [56.4 - 62.8] 0.1
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 44.0 [41.4 - 46.5] 12.9 [10.6 - 15.7] 15.2
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 66.9 [63.1 - 70.6] 43.9 [41.4 - 46.4] 62.7 [59.4 - 65.9] 0.52
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia sp. TW09308' (AEME00000000) 69.9 [66.0 - 73.6] 43.9 [41.3 - 46.4] 65.1 [61.8 - 68.4] 0.3
'Escherichia sp. TW09308' (AEME00000000) Shigella boydii ATCC 8700 55.9 [52.3 - 59.4] 43.8 [41.2 - 46.3] 53.7 [50.5 - 56.7] 0.84
'Escherichia sp. TW09308' (AEME00000000) Escherichia coli DSM 30083 69.7 [65.8 - 73.3] 43.7 [41.2 - 46.3] 64.9 [61.5 - 68.1] 0.37
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli UMN026' (CU928163) 64.3 [60.5 - 67.9] 43.7 [41.2 - 46.3] 60.6 [57.3 - 63.7] 0.44
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia marmotae HT073016 65.9 [62.1 - 69.6] 43.7 [41.2 - 46.2] 61.9 [58.6 - 65.1] 0.49
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia sp. TW09308' (AEME00000000) 65.3 [61.5 - 68.9] 43.6 [41.1 - 46.2] 61.3 [58.1 - 64.5] 0.48
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli S88' (CU928161) 69.5 [65.6 - 73.1] 43.6 [41.1 - 46.2] 64.7 [61.3 - 67.9] 0.4
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia sp. TW09308' (AEME00000000) 63.7 [59.9 - 67.3] 43.6 [41.1 - 46.2] 60.0 [56.8 - 63.2] 0.39
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli IAI39' (CU928164) 62.0 [58.3 - 65.6] 43.6 [41.1 - 46.2] 58.6 [55.4 - 61.8] 0.35
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia marmotae HT073016 59.1 [55.5 - 62.7] 43.5 [41.0 - 46.1] 56.3 [53.1 - 59.4] 0.06
'Escherichia sp. TW09308' (AEME00000000) Shigella dysenteriae ATCC 13313 51.8 [48.4 - 55.3] 43.5 [41.0 - 46.0] 50.2 [47.1 - 53.2] 0.7
'Escherichia coli UMN026' (CU928163) Escherichia marmotae HT073016 63.0 [59.3 - 66.6] 43.5 [41.0 - 46.1] 59.4 [56.2 - 62.6] 0.4
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia marmotae HT073016 61.4 [57.7 - 65.0] 43.5 [41.0 - 46.1] 58.1 [54.9 - 61.3] 0.35
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia marmotae HT073016 63.3 [59.5 - 66.9] 43.4 [40.9 - 46.0] 59.6 [56.4 - 62.8] 0.44
'Escherichia sp. TW09308' (AEME00000000) 'Shigella dysenteriae Sd197' (CP000034) 53.1 [49.6 - 56.5] 43.4 [40.9 - 46.0] 51.2 [48.1 - 54.3] 0.97
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 43.4 [40.9 - 46.0] 12.9 [10.6 - 15.7] 15.38
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia sp. TW09308' (AEME00000000) 61.0 [57.3 - 64.5] 43.4 [40.9 - 46.0] 57.7 [54.5 - 60.9] 0.12
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli SMS-3-5' (CP000970) 65.8 [62.0 - 69.4] 43.4 [40.9 - 45.9] 61.7 [58.4 - 64.8] 0.22
'Escherichia sp. TW09308' (AEME00000000) Shigella flexneri ATCC 29903 55.3 [51.7 - 58.8] 43.4 [40.9 - 46.0] 53.1 [49.9 - 56.1] 0.39
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia marmotae HT073016 60.5 [56.8 - 64.0] 43.3 [40.8 - 45.8] 57.3 [54.1 - 60.4] 0.08
'Escherichia coli SMS-3-5' (CP000970) Escherichia marmotae HT073016 65.0 [61.2 - 68.6] 43.3 [40.8 - 45.9] 60.9 [57.7 - 64.1] 0.18
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia sp. TW09308' (AEME00000000) 63.6 [59.9 - 67.3] 43.3 [40.7 - 45.8] 59.9 [56.6 - 63.0] 0.21
'Escherichia coli IAI39' (CU928164) Escherichia marmotae HT073016 59.9 [56.3 - 63.5] 43.3 [40.7 - 45.8] 56.8 [53.7 - 60.0] 0.32
'Shigella dysenteriae Sd197' (CP000034) Escherichia marmotae HT073016 53.6 [50.1 - 57.0] 43.3 [40.8 - 45.9] 51.6 [48.5 - 54.6] 0.94
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia marmotae HT073016 65.6 [61.7 - 69.2] 43.3 [40.8 - 45.9] 61.4 [58.1 - 64.6] 0.26
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia marmotae HT073016 61.8 [58.1 - 65.4] 43.2 [40.7 - 45.7] 58.4 [55.1 - 61.5] 0.17
'Escherichia coli S88' (CU928161) Escherichia marmotae HT073016 64.8 [61.0 - 68.5] 43.2 [40.7 - 45.8] 60.8 [57.5 - 64.0] 0.37
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia marmotae HT073016 56.6 [53.0 - 60.1] 43.2 [40.7 - 45.7] 54.1 [50.9 - 57.2] 0.22
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 57.8 [54.2 - 61.3] 43.1 [40.6 - 45.7] 55.1 [51.9 - 58.2] 0.26
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli str. 'clone D i14'' (CP002212) 64.6 [60.8 - 68.2] 43.1 [40.6 - 45.7] 60.6 [57.3 - 63.7] 0.28
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli str. 'clone D i2'' (CP002211) 64.6 [60.8 - 68.2] 43.1 [40.6 - 45.7] 60.6 [57.3 - 63.7] 0.28
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia marmotae HT073016 63.0 [59.3 - 66.6] 43.0 [40.5 - 45.6] 59.3 [56.0 - 62.4] 0.25
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia marmotae HT073016 63.0 [59.3 - 66.6] 43.0 [40.5 - 45.6] 59.3 [56.0 - 62.4] 0.25
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia sp. TW09308' (AEME00000000) 53.8 [50.3 - 57.2] 43.0 [40.4 - 45.5] 51.6 [48.6 - 54.7] 0.3
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia marmotae HT073016 52.0 [48.5 - 55.4] 42.9 [40.4 - 45.5] 50.2 [47.1 - 53.2] 0.26
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Skermanella stibiiresistens SB22 12.6 [9.9 - 15.8] 41.9 [39.4 - 44.4] 13.0 [10.6 - 15.7] 9.35
'Escherichia sp. TW09308' (AEME00000000) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 41.8 [39.3 - 44.4] 12.9 [10.6 - 15.7] 15.59
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella sonnei ATCC 29930 58.2 [54.6 - 61.7] 41.8 [39.3 - 44.4] 55.0 [51.8 - 58.1] 1.13
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella dysenteriae ATCC 13313 54.6 [51.1 - 58.1] 41.7 [39.2 - 44.2] 52.0 [48.9 - 55.0] 1.1
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Shigella dysenteriae Sd197' (CP000034) 55.5 [52.0 - 59.0] 41.5 [39.0 - 44.0] 52.6 [49.5 - 55.7] 1.37
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli IAI39' (CU928164) 57.6 [54.0 - 61.2] 41.3 [38.8 - 43.9] 54.3 [51.2 - 57.4] 0.75
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia coli DSM 30083 60.5 [56.9 - 64.1] 41.3 [38.8 - 43.8] 56.7 [53.5 - 59.8] 0.76
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli str. 'clone D i2'' (CP002211) 59.2 [55.6 - 62.8] 41.2 [38.7 - 43.7] 55.6 [52.4 - 58.7] 0.68
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia fergusonii ECD227' (CM001142) 49.6 [46.2 - 53.1] 41.2 [38.7 - 43.7] 47.7 [44.7 - 50.8] 0.36
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli str. 'clone D i14'' (CP002212) 59.2 [55.6 - 62.8] 41.2 [38.7 - 43.7] 55.6 [52.4 - 58.7] 0.68
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia fergusonii ATCC 35469' (CU928158) 48.0 [44.5 - 51.4] 41.2 [38.7 - 43.7] 46.3 [43.3 - 49.3] 0.44
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli IAI39' (CU928164) 50.0 [46.5 - 53.4] 41.2 [38.7 - 43.8] 48.0 [45.0 - 51.0] 0.62
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia fergusonii ECD227' (CM001142) 49.8 [46.3 - 53.2] 41.2 [38.7 - 43.7] 47.8 [44.8 - 50.8] 0.66
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia fergusonii ATCC 35469 47.5 [44.1 - 51.0] 41.2 [38.7 - 43.7] 45.9 [42.9 - 49.0] 0.46
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella boydii ATCC 8700 45.8 [42.4 - 49.2] 41.2 [38.7 - 43.8] 44.4 [41.5 - 47.5] 1.18
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella boydii ATCC 8700 57.2 [53.6 - 60.7] 41.2 [38.7 - 43.8] 53.9 [50.8 - 57.0] 1.23
'Escherichia fergusonii ECD227' (CM001142) Shigella dysenteriae ATCC 13313 43.2 [39.8 - 46.6] 41.2 [38.7 - 43.7] 42.2 [39.2 - 45.2] 0.97
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella flexneri ATCC 29903 44.8 [41.4 - 48.2] 41.2 [38.7 - 43.8] 43.6 [40.6 - 46.6] 0.73
'Escherichia fergusonii ECD227' (CM001142) Shigella boydii ATCC 8700 45.8 [42.5 - 49.3] 41.2 [38.7 - 43.7] 44.5 [41.5 - 47.5] 1.11
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli S88' (CU928161) 60.8 [57.1 - 64.4] 41.1 [38.7 - 43.7] 56.8 [53.7 - 60.0] 0.8
'Escherichia coli IAI39' (CU928164) Escherichia fergusonii ATCC 35469 48.7 [45.2 - 52.1] 41.1 [38.6 - 43.6] 46.9 [43.8 - 49.9] 0.71
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia fergusonii ECD227' (CM001142) 47.1 [43.7 - 50.5] 41.1 [38.6 - 43.6] 45.5 [42.5 - 48.6] 0.38
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia fergusonii ATCC 35469' (CU928158) 47.9 [44.5 - 51.3] 41.1 [38.6 - 43.6] 46.2 [43.2 - 49.3] 0.73
'Escherichia fergusonii ECD227' (CM001142) Shigella flexneri ATCC 29903 44.9 [41.5 - 48.3] 41.1 [38.6 - 43.6] 43.7 [40.7 - 46.7] 0.66
'Escherichia fergusonii ECD227' (CM001142) 'Shigella dysenteriae Sd197' (CP000034) 44.2 [40.8 - 47.6] 41.1 [38.6 - 43.7] 43.0 [40.1 - 46.1] 1.24
'Escherichia fergusonii ATCC 35469' (CU928158) 'Escherichia coli IAI39' (CU928164) 49.0 [45.6 - 52.5] 41.1 [38.6 - 43.6] 47.2 [44.2 - 50.2] 0.69
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia fergusonii ATCC 35469 47.6 [44.2 - 51.0] 41.1 [38.6 - 43.7] 46.0 [43.0 - 49.0] 0.75
'Escherichia coli UMN026' (CU928163) Escherichia fergusonii ATCC 35469 50.6 [47.2 - 54.1] 41.1 [38.6 - 43.6] 48.5 [45.5 - 51.5] 0.8
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 57.4 [53.8 - 60.9] 41.0 [38.5 - 43.6] 54.0 [50.9 - 57.1] 0.87
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia fergusonii ATCC 35469' (CU928158) 44.0 [40.6 - 47.4] 41.0 [38.5 - 43.5] 42.9 [39.9 - 45.9] 1.31
'Escherichia fergusonii ATCC 35469' (CU928158) 'Escherichia coli UMN026' (CU928163) 51.1 [47.6 - 54.5] 41.0 [38.6 - 43.6] 48.9 [45.8 - 51.9] 0.78
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia fergusonii ATCC 35469 40.4 [37.0 - 43.8] 41.0 [38.6 - 43.6] 39.7 [36.7 - 42.8] 0.66
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia fergusonii ATCC 35469 47.4 [44.0 - 50.8] 41.0 [38.5 - 43.5] 45.8 [42.8 - 48.8] 0.83
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella sonnei ATCC 29930 46.1 [42.7 - 49.5] 41.0 [38.5 - 43.5] 44.7 [41.7 - 47.7] 1.08
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia fergusonii ATCC 35469' (CU928158) 47.7 [44.3 - 51.1] 41.0 [38.5 - 43.5] 46.0 [43.0 - 49.1] 0.82
'Shigella dysenteriae Sd197' (CP000034) Escherichia fergusonii ATCC 35469 45.1 [41.7 - 48.5] 41.0 [38.5 - 43.6] 43.8 [40.8 - 46.9] 1.33
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella dysenteriae ATCC 13313 43.0 [39.6 - 46.5] 41.0 [38.5 - 43.6] 42.0 [39.1 - 45.1] 1.04
'Escherichia coli SMS-3-5' (CP000970) Escherichia fergusonii ATCC 35469 48.9 [45.5 - 52.4] 41.0 [38.5 - 43.5] 47.1 [44.1 - 50.1] 0.58
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli SMS-3-5' (CP000970) 59.7 [56.1 - 63.3] 41.0 [38.5 - 43.5] 55.9 [52.7 - 59.0] 0.61
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia fergusonii ATCC 35469' (CU928158) 40.7 [37.3 - 44.1] 41.0 [38.6 - 43.6] 40.0 [37.0 - 43.0] 0.64
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli SMS-3-5' (CP000970) 50.2 [46.8 - 53.7] 41.0 [38.5 - 43.5] 48.2 [45.1 - 51.2] 0.49
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia fergusonii ATCC 35469 46.0 [42.6 - 49.4] 41.0 [38.6 - 43.6] 44.6 [41.6 - 47.6] 0.47
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia fergusonii ATCC 35469' (CU928158) 49.3 [45.9 - 52.7] 41.0 [38.5 - 43.5] 47.4 [44.3 - 50.4] 0.56
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia fergusonii ATCC 35469' (CU928158) 46.3 [42.9 - 49.8] 41.0 [38.5 - 43.6] 44.9 [41.9 - 47.9] 0.46
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 56.1 [52.5 - 59.6] 40.9 [38.5 - 43.5] 52.9 [49.8 - 56.0] 0.78
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia fergusonii ECD227' (CM001142) 42.0 [38.6 - 45.4] 40.9 [38.4 - 43.4] 41.1 [38.1 - 44.1] 0.56
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli UMN026' (CU928163) 57.4 [53.8 - 61.0] 40.9 [38.4 - 43.4] 54.0 [50.9 - 57.1] 0.83
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella flexneri ATCC 29903 54.7 [51.1 - 58.1] 40.9 [38.4 - 43.4] 51.8 [48.7 - 54.8] 0.78
'Escherichia fergusonii ECD227' (CM001142) Shigella sonnei ATCC 29930 47.4 [44.0 - 50.8] 40.9 [38.4 - 43.4] 45.7 [42.7 - 48.8] 1.0
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia fergusonii ATCC 35469' (CU928158) 53.1 [49.6 - 56.6] 40.9 [38.4 - 43.5] 50.5 [47.4 - 53.6] 0.86
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia fergusonii ATCC 35469 52.6 [49.1 - 56.0] 40.9 [38.4 - 43.5] 50.1 [47.0 - 53.1] 0.88
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia fergusonii ATCC 35469' (CU928158) 51.6 [48.1 - 55.0] 40.8 [38.3 - 43.4] 49.2 [46.2 - 52.3] 0.64
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia fergusonii ECD227' (CM001142) 52.5 [49.0 - 56.0] 40.8 [38.3 - 43.3] 50.0 [46.9 - 53.1] 0.56
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia fergusonii ECD227' (CM001142) 49.0 [45.6 - 52.5] 40.8 [38.3 - 43.3] 47.1 [44.1 - 50.1] 0.48
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia fergusonii ATCC 35469 47.9 [44.5 - 51.4] 40.8 [38.3 - 43.3] 46.2 [43.2 - 49.2] 0.57
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli UMN026' (CU928163) 51.9 [48.5 - 55.4] 40.8 [38.3 - 43.3] 49.5 [46.5 - 52.6] 0.71
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia fergusonii ATCC 35469 51.0 [47.5 - 54.4] 40.8 [38.3 - 43.4] 48.7 [45.7 - 51.8] 0.66
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia fergusonii ECD227' (CM001142) 49.1 [45.7 - 52.6] 40.8 [38.3 - 43.3] 47.2 [44.2 - 50.2] 0.74
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 60.1 [56.5 - 63.7] 40.8 [38.3 - 43.3] 56.1 [53.0 - 59.3] 0.92
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 56.0 [52.4 - 59.5] 40.7 [38.2 - 43.2] 52.8 [49.7 - 55.9] 0.6
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia fergusonii ATCC 35469' (CU928158) 48.3 [44.9 - 51.7] 40.7 [38.3 - 43.3] 46.5 [43.5 - 49.5] 0.55
'Shigella dysenteriae Sd197' (CP000034) Escherichia albertii NBRC 107761 55.3 [51.7 - 58.8] 40.7 [38.2 - 43.3] 52.2 [49.1 - 55.3] 1.46
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia fergusonii ECD227' (CM001142) 52.9 [49.4 - 56.4] 40.7 [38.2 - 43.2] 50.3 [47.2 - 53.3] 0.79
'Escherichia coli S88' (CU928161) Escherichia albertii NBRC 107761 60.8 [57.1 - 64.4] 40.6 [38.1 - 43.2] 56.6 [53.5 - 59.8] 0.89
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia albertii NBRC 107761 55.8 [52.2 - 59.3] 40.6 [38.1 - 43.2] 52.6 [49.5 - 55.7] 0.88
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli S88' (CU928161) 53.1 [49.6 - 56.6] 40.6 [38.1 - 43.1] 50.4 [47.3 - 53.5] 0.67
'Escherichia coli IAI39' (CU928164) Escherichia albertii NBRC 107761 57.3 [53.7 - 60.8] 40.6 [38.1 - 43.1] 53.8 [50.7 - 56.9] 0.84
'Escherichia coli S88' (CU928161) Escherichia fergusonii ATCC 35469 50.8 [47.4 - 54.3] 40.5 [38.0 - 43.0] 48.5 [45.5 - 51.6] 0.76
'Escherichia fergusonii ATCC 35469' (CU928158) 'Escherichia coli S88' (CU928161) 51.4 [47.9 - 54.8] 40.5 [38.0 - 43.0] 48.9 [45.9 - 52.0] 0.74
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia albertii NBRC 107761 55.8 [52.3 - 59.3] 40.5 [38.0 - 43.0] 52.6 [49.5 - 55.6] 0.7
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 54.0 [50.5 - 57.5] 40.5 [38.0 - 43.1] 51.2 [48.1 - 54.2] 0.49
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia albertii NBRC 107761 59.0 [55.4 - 62.5] 40.5 [38.0 - 43.1] 55.2 [52.0 - 58.3] 0.77
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia fergusonii ATCC 35469 44.4 [41.1 - 47.9] 40.5 [38.0 - 43.1] 43.1 [40.1 - 46.2] 0.62
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia albertii NBRC 107761 59.0 [55.4 - 62.5] 40.5 [38.0 - 43.1] 55.2 [52.0 - 58.3] 0.77
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia fergusonii ATCC 35469' (CU928158) 44.8 [41.4 - 48.2] 40.5 [38.0 - 43.1] 43.5 [40.5 - 46.5] 0.6
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia albertii NBRC 107761 57.2 [53.6 - 60.7] 40.4 [37.9 - 42.9] 53.6 [50.5 - 56.7] 0.96
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 52.6 [49.1 - 56.0] 40.4 [37.9 - 42.9] 49.9 [46.9 - 53.0] 0.51
'Escherichia coli UMN026' (CU928163) Escherichia albertii NBRC 107761 57.5 [53.9 - 61.0] 40.4 [37.9 - 42.9] 53.9 [50.8 - 57.0] 0.93
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 53.8 [50.3 - 57.3] 40.4 [37.9 - 42.9] 50.9 [47.8 - 54.0] 0.69
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia fergusonii ECD227' (CM001142) 46.2 [42.8 - 49.6] 40.4 [37.9 - 42.9] 44.6 [41.6 - 47.6] 0.53
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia albertii NBRC 107761 61.3 [57.6 - 64.8] 40.3 [37.8 - 42.8] 56.9 [53.7 - 60.0] 1.01
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 57.7 [54.1 - 61.2] 40.3 [37.8 - 42.9] 54.1 [50.9 - 57.1] 0.65
'Escherichia fergusonii ECD227' (CM001142) Escherichia coli DSM 30083 51.9 [48.4 - 55.3] 40.3 [37.8 - 42.8] 49.3 [46.3 - 52.4] 0.63
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia albertii NBRC 107761 54.3 [50.8 - 57.8] 40.3 [37.8 - 42.8] 51.3 [48.2 - 54.4] 0.6
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia albertii NBRC 107761 55.7 [52.2 - 59.2] 40.3 [37.9 - 42.9] 52.5 [49.4 - 55.5] 0.59
'Escherichia coli SMS-3-5' (CP000970) Escherichia albertii NBRC 107761 59.6 [55.9 - 63.1] 40.3 [37.8 - 42.8] 55.5 [52.4 - 58.6] 0.71
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia coli DSM 30083 50.3 [46.9 - 53.7] 40.2 [37.7 - 42.8] 48.0 [45.0 - 51.0] 0.71
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli str. 'clone D i2'' (CP002211) 50.1 [46.7 - 53.6] 40.2 [37.7 - 42.7] 47.8 [44.8 - 50.9] 0.55
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli str. 'clone D i14'' (CP002212) 50.1 [46.7 - 53.6] 40.2 [37.7 - 42.7] 47.8 [44.8 - 50.9] 0.55
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia fergusonii ATCC 35469' (CU928158) 49.3 [45.9 - 52.7] 40.1 [37.7 - 42.7] 47.1 [44.1 - 50.2] 0.62
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 56.4 [52.8 - 59.9] 40.1 [37.6 - 42.6] 52.9 [49.8 - 56.0] 0.69
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia fergusonii ATCC 35469' (CU928158) 49.3 [45.9 - 52.7] 40.1 [37.7 - 42.7] 47.1 [44.1 - 50.2] 0.62
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia albertii NBRC 107761 53.7 [50.2 - 57.2] 40.1 [37.7 - 42.7] 50.8 [47.7 - 53.9] 0.79
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia albertii NBRC 107761 58.9 [55.2 - 62.4] 40.1 [37.6 - 42.6] 54.9 [51.7 - 58.0] 0.79
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia fergusonii ATCC 35469 48.9 [45.5 - 52.3] 40.1 [37.6 - 42.6] 46.8 [43.8 - 49.8] 0.64
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia fergusonii ATCC 35469 48.9 [45.5 - 52.3] 40.1 [37.6 - 42.6] 46.8 [43.8 - 49.8] 0.64
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia albertii NBRC 107761 57.9 [54.3 - 61.4] 40.1 [37.6 - 42.7] 54.1 [51.0 - 57.2] 0.75
'Escherichia sp. TW09308' (AEME00000000) Escherichia albertii NBRC 107761 59.9 [56.3 - 63.5] 38.5 [36.1 - 41.1] 55.1 [52.0 - 58.3] 0.49
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia sp. TW09308' (AEME00000000) 57.2 [53.6 - 60.7] 38.5 [36.1 - 41.1] 53.0 [49.9 - 56.1] 0.39
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia marmotae HT073016 56.3 [52.7 - 59.7] 38.2 [35.8 - 40.7] 52.1 [49.1 - 55.2] 0.43
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia fergusonii ECD227' (CM001142) 51.5 [48.0 - 54.9] 34.6 [32.2 - 37.2] 47.1 [44.1 - 50.2] 0.27
'Escherichia sp. TW09308' (AEME00000000) Escherichia fergusonii ATCC 35469 49.5 [46.1 - 53.0] 34.6 [32.1 - 37.1] 45.6 [42.6 - 48.6] 0.36
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia fergusonii ATCC 35469' (CU928158) 50.1 [46.6 - 53.5] 34.6 [32.1 - 37.1] 46.0 [43.0 - 49.0] 0.34
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia marmotae HT073016 49.5 [46.1 - 52.9] 34.5 [32.1 - 37.0] 45.6 [42.6 - 48.6] 0.38
'Escherichia fergusonii ECD227' (CM001142) Escherichia marmotae HT073016 50.1 [46.7 - 53.6] 34.4 [32.0 - 36.9] 46.0 [43.0 - 49.0] 0.3
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia fergusonii ATCC 35469 44.3 [40.9 - 47.7] 34.4 [32.0 - 36.9] 41.4 [38.4 - 44.4] 0.04
'Escherichia fergusonii ECD227' (CM001142) Escherichia albertii NBRC 107761 46.7 [43.3 - 50.1] 34.3 [31.9 - 36.8] 43.3 [40.3 - 46.3] 0.22
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia fergusonii ECD227' (CM001142) 44.9 [41.6 - 48.4] 34.3 [31.9 - 36.8] 41.9 [38.9 - 44.9] 0.13
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia fergusonii ATCC 35469' (CU928158) 43.2 [39.9 - 46.7] 34.2 [31.8 - 36.7] 40.5 [37.5 - 43.5] 0.05
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia albertii NBRC 107761 44.9 [41.5 - 48.3] 34.1 [31.7 - 36.6] 41.8 [38.8 - 44.8] 0.15
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Skermanella stibiiresistens SB22 12.5 [9.8 - 15.8] 33.5 [31.1 - 36.0] 12.9 [10.6 - 15.7] 15.11
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Skermanella stibiiresistens SB22 12.5 [9.9 - 15.8] 30.5 [28.1 - 33.0] 12.9 [10.6 - 15.7] 15.29
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Citrobacter diversus NCTC 10849 34.3 [30.9 - 37.9] 26.6 [24.2 - 29.0] 31.4 [28.5 - 34.5] 2.92
'Escherichia coli IAI39' (CU928164) Citrobacter diversus NCTC 10849 34.4 [31.1 - 38.0] 26.1 [23.7 - 28.5] 31.4 [28.5 - 34.5] 2.96
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Levinea malonatica NCTC 10810 33.4 [30.0 - 37.0] 25.8 [23.4 - 28.2] 30.5 [27.6 - 33.6] 3.12
'Shigella dysenteriae Sd197' (CP000034) Levinea malonatica NCTC 10810 32.0 [28.7 - 35.6] 25.8 [23.5 - 28.3] 29.5 [26.6 - 32.6] 2.53
'Shigella dysenteriae Sd197' (CP000034) Citrobacter diversus NCTC 10849 31.1 [27.7 - 34.7] 25.8 [23.4 - 28.2] 28.8 [25.9 - 31.9] 2.34
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Citrobacter diversus NCTC 10849 34.5 [31.2 - 38.1] 25.8 [23.5 - 28.3] 31.4 [28.5 - 34.5] 2.84
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Citrobacter diversus NCTC 10849 32.6 [29.2 - 36.1] 25.7 [23.3 - 28.1] 29.9 [27.0 - 33.0] 3.2
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Citrobacter diversus NCTC 10849 32.0 [28.6 - 35.5] 25.6 [23.3 - 28.1] 29.4 [26.5 - 32.5] 3.21
'Shigella dysenteriae Sd197' (CP000034) Citrobacter koseri NCTC 10786 31.8 [28.4 - 35.4] 25.6 [23.3 - 28.1] 29.3 [26.4 - 32.4] 2.56
'Escherichia coli str. 'clone D i14'' (CP002212) Citrobacter diversus NCTC 10849 34.3 [30.9 - 37.8] 25.6 [23.3 - 28.1] 31.1 [28.2 - 34.2] 3.03
'Escherichia coli str. 'clone D i2'' (CP002211) Citrobacter diversus NCTC 10849 34.3 [30.9 - 37.8] 25.6 [23.3 - 28.1] 31.1 [28.2 - 34.2] 3.03
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Citrobacter koseri NCTC 10786 33.0 [29.6 - 36.5] 25.6 [23.2 - 28.0] 30.2 [27.2 - 33.3] 3.14
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Citrobacter diversus NCTC 10849 33.3 [29.9 - 36.9] 25.5 [23.2 - 28.0] 30.4 [27.5 - 33.5] 3.1
'Escherichia coli IAI39' (CU928164) Citrobacter koseri NCTC 10786 35.3 [32.0 - 38.9] 25.5 [23.1 - 27.9] 31.9 [29.0 - 35.0] 3.17
'Escherichia coli str. 'clone D i2'' (CP002211) Levinea malonatica NCTC 10810 36.0 [32.6 - 39.5] 25.5 [23.1 - 28.0] 32.4 [29.4 - 35.4] 3.22
'Escherichia coli S88' (CU928161) Citrobacter diversus NCTC 10849 34.2 [30.8 - 37.8] 25.5 [23.2 - 28.0] 31.1 [28.1 - 34.2] 2.91
'Escherichia coli IAI39' (CU928164) Levinea malonatica NCTC 10810 35.2 [31.8 - 38.7] 25.5 [23.2 - 28.0] 31.8 [28.8 - 34.9] 3.15
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Citrobacter koseri NCTC 10786 32.9 [29.5 - 36.5] 25.5 [23.1 - 28.0] 30.1 [27.2 - 33.2] 3.43
'Escherichia coli UMN026' (CU928163) Citrobacter diversus NCTC 10849 35.0 [31.6 - 38.5] 25.5 [23.2 - 28.0] 31.6 [28.7 - 34.7] 2.87
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Levinea malonatica NCTC 10810 34.8 [31.4 - 38.3] 25.5 [23.2 - 28.0] 31.5 [28.6 - 34.6] 3.03
'Escherichia coli str. 'clone D i14'' (CP002212) Levinea malonatica NCTC 10810 36.0 [32.6 - 39.5] 25.5 [23.1 - 28.0] 32.4 [29.4 - 35.4] 3.22
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Levinea malonatica NCTC 10810 33.6 [30.2 - 37.1] 25.5 [23.2 - 28.0] 30.6 [27.7 - 33.7] 3.39
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Levinea malonatica NCTC 10810 32.9 [29.5 - 36.4] 25.5 [23.2 - 28.0] 30.1 [27.2 - 33.2] 3.41
'Escherichia coli str. K-12 substr. W3110' (AP009048) Levinea malonatica NCTC 10810 36.8 [33.4 - 40.3] 25.4 [23.1 - 27.9] 32.9 [30.0 - 36.0] 2.98
'Escherichia coli str. 'clone D i14'' (CP002212) Citrobacter koseri NCTC 10786 35.6 [32.2 - 39.1] 25.4 [23.1 - 27.9] 32.0 [29.1 - 35.1] 3.25
'Escherichia coli S88' (CU928161) Levinea malonatica NCTC 10810 35.3 [31.9 - 38.8] 25.4 [23.1 - 27.9] 31.9 [28.9 - 35.0] 3.1
'Escherichia coli str. K-12 substr. W3110' (AP009048) Citrobacter diversus NCTC 10849 35.4 [32.1 - 39.0] 25.4 [23.1 - 27.9] 32.0 [29.0 - 35.0] 2.79
'Escherichia coli S88' (CU928161) Citrobacter koseri NCTC 10786 35.3 [32.0 - 38.9] 25.4 [23.1 - 27.9] 31.9 [28.9 - 35.0] 3.12
'Escherichia coli str. 'clone D i2'' (CP002211) Citrobacter koseri NCTC 10786 35.6 [32.2 - 39.1] 25.4 [23.1 - 27.9] 32.0 [29.1 - 35.1] 3.25
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Levinea malonatica NCTC 10810 35.2 [31.9 - 38.8] 25.4 [23.1 - 27.9] 31.8 [28.9 - 34.9] 3.3
'Escherichia coli SMS-3-5' (CP000970) Citrobacter diversus NCTC 10849 34.0 [30.6 - 37.5] 25.4 [23.1 - 27.9] 30.9 [28.0 - 34.0] 3.09
'Escherichia coli UMN026' (CU928163) Levinea malonatica NCTC 10810 35.1 [31.8 - 38.7] 25.4 [23.1 - 27.9] 31.7 [28.8 - 34.8] 3.07
'Escherichia coli UMN026' (CU928163) Citrobacter koseri NCTC 10786 35.0 [31.6 - 38.5] 25.4 [23.1 - 27.9] 31.6 [28.7 - 34.7] 3.09
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Citrobacter diversus NCTC 10849 30.0 [26.6 - 33.6] 25.4 [23.1 - 27.9] 27.9 [25.0 - 31.0] 3.01
'Escherichia coli O157:H7 str. Sakai' (BA000007) Citrobacter diversus NCTC 10849 32.3 [28.9 - 35.9] 25.3 [23.0 - 27.8] 29.6 [26.7 - 32.7] 3.05
'Escherichia coli str. K-12 substr. W3110' (AP009048) Citrobacter koseri NCTC 10786 36.6 [33.2 - 40.1] 25.3 [23.0 - 27.8] 32.7 [29.8 - 35.8] 3.01
'Escherichia coli SMS-3-5' (CP000970) Levinea malonatica NCTC 10810 35.4 [32.0 - 38.9] 25.3 [23.0 - 27.8] 31.9 [28.9 - 35.0] 3.29
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Citrobacter koseri NCTC 10786 33.2 [29.8 - 36.8] 25.3 [23.0 - 27.8] 30.3 [27.4 - 33.4] 3.41
'Escherichia sp. TW09308' (AEME00000000) Citrobacter diversus NCTC 10849 33.1 [29.7 - 36.6] 25.3 [22.9 - 27.7] 30.2 [27.2 - 33.3] 3.31
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Citrobacter koseri NCTC 10786 34.5 [31.1 - 38.1] 25.3 [23.0 - 27.8] 31.2 [28.3 - 34.3] 3.32
'Escherichia coli O157:H7 str. Sakai' (BA000007) Levinea malonatica NCTC 10810 33.0 [29.6 - 36.5] 25.2 [22.9 - 27.7] 30.1 [27.1 - 33.2] 3.25
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Citrobacter koseri NCTC 10786 34.7 [31.3 - 38.2] 25.2 [22.9 - 27.7] 31.3 [28.4 - 34.4] 3.05
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Levinea malonatica NCTC 10810 34.8 [31.5 - 38.4] 25.2 [22.9 - 27.7] 31.5 [28.5 - 34.5] 3.21
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Citrobacter diversus NCTC 10849 32.2 [28.8 - 35.7] 25.2 [22.9 - 27.7] 29.5 [26.5 - 32.6] 3.7
'Escherichia coli SMS-3-5' (CP000970) Citrobacter koseri NCTC 10786 35.2 [31.8 - 38.7] 25.2 [22.9 - 27.7] 31.7 [28.8 - 34.8] 3.31
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Citrobacter diversus NCTC 10849 34.0 [30.6 - 37.5] 25.2 [22.9 - 27.7] 30.8 [27.9 - 33.9] 3.01
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Citrobacter koseri NCTC 10786 34.8 [31.4 - 38.3] 25.2 [22.8 - 27.7] 31.4 [28.5 - 34.5] 3.23
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Levinea malonatica NCTC 10810 30.2 [26.9 - 33.8] 25.1 [22.8 - 27.6] 28.0 [25.1 - 31.1] 3.21
'Escherichia coli O157:H7 str. Sakai' (BA000007) Citrobacter koseri NCTC 10786 33.1 [29.7 - 36.6] 25.1 [22.8 - 27.6] 30.1 [27.2 - 33.2] 3.27
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Citrobacter koseri NCTC 10786 30.2 [26.8 - 33.8] 25.0 [22.7 - 27.5] 27.9 [25.0 - 31.0] 3.23
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Levinea malonatica NCTC 10810 32.9 [29.5 - 36.5] 25.0 [22.6 - 27.4] 30.0 [27.0 - 33.1] 3.9
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Citrobacter koseri NCTC 10786 32.6 [29.2 - 36.1] 24.9 [22.6 - 27.4] 29.7 [26.8 - 32.8] 3.92
'Shigella dysenteriae Sd197' (CP000034) Citrobacter amalonaticus NCTC 10805 31.8 [28.4 - 35.3] 24.9 [22.6 - 27.4] 29.1 [26.2 - 32.2] 2.18
'Escherichia sp. TW09308' (AEME00000000) Citrobacter koseri NCTC 10786 33.3 [29.9 - 36.8] 24.8 [22.5 - 27.3] 30.2 [27.2 - 33.3] 3.53
'Escherichia fergusonii ATCC 35469' (CU928158) Citrobacter diversus NCTC 10849 32.4 [29.0 - 36.0] 24.8 [22.5 - 27.3] 29.5 [26.6 - 32.6] 3.65
'Escherichia fergusonii ATCC 35469' (CU928158) Citrobacter koseri NCTC 10786 33.6 [30.2 - 37.1] 24.8 [22.5 - 27.2] 30.4 [27.5 - 33.5] 3.87
'Escherichia sp. TW09308' (AEME00000000) Levinea malonatica NCTC 10810 34.1 [30.8 - 37.7] 24.8 [22.5 - 27.3] 30.8 [27.9 - 33.9] 3.51
'Escherichia fergusonii ATCC 35469' (CU928158) Levinea malonatica NCTC 10810 33.6 [30.2 - 37.1] 24.7 [22.4 - 27.2] 30.4 [27.5 - 33.5] 3.85
'Escherichia coli IAI39' (CU928164) Salmonella typhi NCTC 8385 30.5 [27.1 - 34.1] 24.6 [22.3 - 27.1] 28.1 [25.2 - 31.2] 1.46
'Escherichia fergusonii ECD227' (CM001142) Citrobacter diversus NCTC 10849 32.6 [29.2 - 36.1] 24.6 [22.3 - 27.1] 29.6 [26.7 - 32.7] 3.58
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Citrobacter amalonaticus NCTC 10805 32.7 [29.3 - 36.3] 24.6 [22.3 - 27.0] 29.7 [26.8 - 32.8] 2.76
'Escherichia coli str. K-12 substr. W3110' (AP009048) Citrobacter amalonaticus NCTC 10805 36.2 [32.9 - 39.8] 24.6 [22.3 - 27.0] 32.3 [29.3 - 35.3] 2.63
'Escherichia coli O157:H7 str. Sakai' (BA000007) Citrobacter amalonaticus NCTC 10805 33.6 [30.2 - 37.1] 24.5 [22.2 - 27.0] 30.3 [27.4 - 33.4] 2.89
'Escherichia fergusonii ECD227' (CM001142) Citrobacter koseri NCTC 10786 33.4 [30.0 - 37.0] 24.5 [22.2 - 27.0] 30.2 [27.3 - 33.3] 3.79
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Citrobacter amalonaticus NCTC 10805 32.1 [28.7 - 35.7] 24.5 [22.2 - 26.9] 29.2 [26.3 - 32.3] 2.94
'Shigella dysenteriae Sd197' (CP000034) Salmonella enterica LT2 28.1 [24.7 - 31.7] 24.5 [22.2 - 27.0] 26.2 [23.3 - 29.3] 0.99
'Escherichia coli S88' (CU928161) Citrobacter amalonaticus NCTC 10805 35.1 [31.7 - 38.6] 24.5 [22.1 - 26.9] 31.4 [28.5 - 34.5] 2.75
'Shigella dysenteriae Sd197' (CP000034) Salmonella typhi NCTC 8385 28.7 [25.3 - 32.3] 24.5 [22.2 - 27.0] 26.7 [23.8 - 29.8] 0.84
'Escherichia fergusonii ECD227' (CM001142) Levinea malonatica NCTC 10810 33.8 [30.4 - 37.3] 24.5 [22.2 - 27.0] 30.5 [27.5 - 33.6] 3.77
'Shigella dysenteriae Sd197' (CP000034) Salmonella typhimurium ATCC 13311 28.4 [25.1 - 32.1] 24.5 [22.2 - 27.0] 26.5 [23.6 - 29.6] 0.86
'Escherichia coli UMN026' (CU928163) Citrobacter amalonaticus NCTC 10805 35.2 [31.8 - 38.7] 24.5 [22.1 - 26.9] 31.5 [28.5 - 34.6] 2.71
'Escherichia coli SMS-3-5' (CP000970) Citrobacter amalonaticus NCTC 10805 35.8 [32.4 - 39.3] 24.4 [22.1 - 26.9] 31.9 [28.9 - 35.0] 2.93
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Citrobacter amalonaticus NCTC 10805 32.3 [28.9 - 35.9] 24.4 [22.1 - 26.8] 29.3 [26.4 - 32.4] 3.04
'Escherichia coli IAI39' (CU928164) Citrobacter amalonaticus NCTC 10805 34.2 [30.8 - 37.8] 24.4 [22.1 - 26.9] 30.8 [27.8 - 33.9] 2.8
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Citrobacter amalonaticus NCTC 10805 35.7 [32.3 - 39.2] 24.4 [22.1 - 26.9] 31.8 [28.9 - 34.9] 2.86
'Escherichia coli str. 'clone D i2'' (CP002211) Citrobacter amalonaticus NCTC 10805 34.8 [31.4 - 38.4] 24.4 [22.1 - 26.9] 31.2 [28.3 - 34.3] 2.87
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Citrobacter amalonaticus NCTC 10805 31.4 [28.0 - 35.0] 24.4 [22.1 - 26.9] 28.7 [25.8 - 31.8] 3.55
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Citrobacter amalonaticus NCTC 10805 33.1 [29.7 - 36.7] 24.4 [22.1 - 26.9] 30.0 [27.0 - 33.1] 3.06
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Citrobacter amalonaticus NCTC 10805 30.5 [27.2 - 34.1] 24.4 [22.1 - 26.8] 28.0 [25.1 - 31.2] 2.85
'Escherichia coli str. 'clone D i14'' (CP002212) Citrobacter amalonaticus NCTC 10805 34.8 [31.4 - 38.4] 24.4 [22.1 - 26.9] 31.2 [28.3 - 34.3] 2.87
'Shigella dysenteriae Sd197' (CP000034) Salmonella choleraesuis DSM 14846 28.4 [25.0 - 32.0] 24.3 [22.0 - 26.8] 26.4 [23.5 - 29.5] 0.89
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Citrobacter amalonaticus NCTC 10805 33.5 [30.1 - 37.0] 24.3 [22.0 - 26.8] 30.2 [27.3 - 33.3] 2.68
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella typhi NCTC 8385 29.0 [25.7 - 32.7] 24.3 [22.0 - 26.8] 26.9 [24.0 - 30.0] 1.7
'Escherichia coli S88' (CU928161) Salmonella typhi NCTC 8385 31.3 [27.9 - 34.8] 24.3 [22.0 - 26.8] 28.6 [25.6 - 31.7] 1.41
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella typhi NCTC 8385 31.2 [27.8 - 34.7] 24.3 [22.0 - 26.8] 28.5 [25.6 - 31.6] 1.51
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella typhi NCTC 8385 28.4 [25.1 - 32.1] 24.2 [21.9 - 26.7] 26.4 [23.5 - 29.5] 1.42
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella enterica LT2 29.7 [26.3 - 33.3] 24.2 [21.9 - 26.7] 27.3 [24.4 - 30.4] 1.57
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella typhimurium ATCC 13311 32.5 [29.1 - 36.0] 24.2 [21.9 - 26.6] 29.4 [26.5 - 32.5] 1.31
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella typhi NCTC 8385 31.5 [28.1 - 35.1] 24.2 [21.9 - 26.6] 28.7 [25.8 - 31.8] 1.29
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella typhimurium ATCC 13311 29.7 [26.3 - 33.3] 24.2 [21.9 - 26.7] 27.3 [24.4 - 30.4] 1.45
'Escherichia coli UMN026' (CU928163) Salmonella typhi NCTC 8385 30.4 [27.0 - 34.0] 24.2 [21.9 - 26.6] 27.9 [25.0 - 31.0] 1.37
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella typhimurium ATCC 13311 30.3 [26.9 - 33.9] 24.2 [21.9 - 26.6] 27.8 [24.9 - 30.9] 1.74
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella enterica LT2 32.0 [28.6 - 35.5] 24.2 [21.8 - 26.6] 29.0 [26.1 - 32.1] 1.44
'Shigella dysenteriae Sd197' (CP000034) Salmonella typhimurium JCM 1652 28.2 [24.9 - 31.8] 24.2 [21.9 - 26.7] 26.3 [23.4 - 29.4] 0.81
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella typhi NCTC 8385 29.0 [25.6 - 32.6] 24.1 [21.8 - 26.6] 26.8 [23.9 - 29.9] 1.55
'Escherichia coli SMS-3-5' (CP000970) Salmonella typhimurium ATCC 13311 30.9 [27.6 - 34.5] 24.1 [21.8 - 26.6] 28.3 [25.4 - 31.4] 1.62
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella typhimurium JCM 1652 30.0 [26.7 - 33.6] 24.1 [21.8 - 26.6] 27.6 [24.7 - 30.7] 1.69
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella typhimurium JCM 1652 29.4 [26.0 - 33.0] 24.1 [21.8 - 26.6] 27.1 [24.2 - 30.2] 1.4
'Escherichia sp. TW09308' (AEME00000000) Citrobacter amalonaticus NCTC 10805 33.8 [30.4 - 37.4] 24.1 [21.8 - 26.5] 30.4 [27.4 - 33.5] 3.15
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella typhi NCTC 8385 28.6 [25.2 - 32.2] 24.1 [21.8 - 26.6] 26.5 [23.6 - 29.6] 1.71
'Shigella dysenteriae Sd197' (CP000034) Salmonella enterica subsp. arizonae NCTC 8297 28.6 [25.3 - 32.2] 24.1 [21.8 - 26.6] 26.5 [23.6 - 29.6] 0.27
'Escherichia coli UMN026' (CU928163) Salmonella typhimurium ATCC 13311 32.0 [28.6 - 35.6] 24.1 [21.8 - 26.5] 29.0 [26.1 - 32.1] 1.4
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella typhi NCTC 8385 29.1 [25.7 - 32.7] 24.1 [21.8 - 26.5] 26.9 [24.0 - 30.0] 1.6
'Escherichia fergusonii ATCC 35469' (CU928158) Citrobacter amalonaticus NCTC 10805 33.8 [30.4 - 37.4] 24.1 [21.8 - 26.6] 30.4 [27.5 - 33.5] 3.49
'Escherichia coli SMS-3-5' (CP000970) Salmonella enterica LT2 30.5 [27.1 - 34.1] 24.1 [21.8 - 26.6] 27.9 [25.0 - 31.0] 1.74
'Escherichia coli UMN026' (CU928163) Salmonella enterica LT2 31.5 [28.1 - 35.1] 24.1 [21.8 - 26.5] 28.7 [25.8 - 31.8] 1.52
'Escherichia coli SMS-3-5' (CP000970) Salmonella typhi NCTC 8385 30.4 [27.1 - 34.0] 24.1 [21.8 - 26.6] 27.9 [25.0 - 31.0] 1.59
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella enterica LT2 29.2 [25.8 - 32.8] 24.0 [21.7 - 26.5] 26.9 [24.0 - 30.0] 1.7
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella typhimurium ATCC 13311 29.1 [25.7 - 32.7] 24.0 [21.7 - 26.5] 26.9 [24.0 - 30.0] 1.72
'Escherichia sp. TW09308' (AEME00000000) Salmonella typhi NCTC 8385 30.0 [26.6 - 33.6] 24.0 [21.7 - 26.5] 27.5 [24.6 - 30.6] 1.81
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella choleraesuis DSM 14846 29.1 [25.7 - 32.7] 24.0 [21.7 - 26.4] 26.9 [24.0 - 30.0] 1.47
'Escherichia coli S88' (CU928161) Salmonella enterica LT2 30.9 [27.5 - 34.5] 24.0 [21.7 - 26.4] 28.2 [25.3 - 31.3] 1.56
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella typhi NCTC 8385 30.1 [26.8 - 33.7] 24.0 [21.7 - 26.5] 27.6 [24.7 - 30.8] 1.53
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella enterica LT2 29.5 [26.2 - 33.2] 24.0 [21.7 - 26.4] 27.2 [24.3 - 30.3] 1.86
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella typhimurium ATCC 13311 26.7 [23.4 - 30.4] 24.0 [21.7 - 26.4] 25.1 [22.2 - 28.2] 1.54
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella typhi NCTC 8385 30.1 [26.8 - 33.7] 24.0 [21.7 - 26.5] 27.6 [24.7 - 30.8] 1.53
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella typhi NCTC 8385 29.7 [26.3 - 33.3] 24.0 [21.7 - 26.4] 27.3 [24.4 - 30.4] 2.15
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella typhimurium ATCC 13311 30.1 [26.7 - 33.7] 24.0 [21.7 - 26.4] 27.6 [24.7 - 30.7] 1.63
'Escherichia coli IAI39' (CU928164) Salmonella enterica LT2 30.4 [27.0 - 34.0] 24.0 [21.7 - 26.5] 27.8 [24.9 - 30.9] 1.61
'Shigella dysenteriae Sd197' (CP000034) Salmonella bongori NCTC 12419 28.2 [24.8 - 31.8] 24.0 [21.6 - 26.4] 26.1 [23.3 - 29.3] 0.08
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella enterica LT2 29.6 [26.3 - 33.2] 24.0 [21.7 - 26.4] 27.3 [24.4 - 30.4] 1.75
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella enterica LT2 28.7 [25.3 - 32.3] 24.0 [21.7 - 26.4] 26.6 [23.7 - 29.7] 1.85
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella typhi NCTC 8385 29.6 [26.2 - 33.2] 24.0 [21.7 - 26.4] 27.2 [24.3 - 30.3] 1.34
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella typhimurium ATCC 13311 29.5 [26.1 - 33.1] 24.0 [21.7 - 26.5] 27.2 [24.3 - 30.3] 1.58
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella typhi NCTC 8385 26.5 [23.2 - 30.2] 24.0 [21.7 - 26.4] 24.9 [22.0 - 28.0] 1.51
'Escherichia coli IAI39' (CU928164) Salmonella typhimurium ATCC 13311 30.6 [27.2 - 34.2] 24.0 [21.7 - 26.5] 28.0 [25.1 - 31.1] 1.48
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella enterica LT2 28.6 [25.3 - 32.2] 23.9 [21.6 - 26.3] 26.5 [23.6 - 29.6] 2.36
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella typhimurium ATCC 13311 31.4 [28.0 - 35.0] 23.9 [21.6 - 26.4] 28.6 [25.6 - 31.7] 1.55
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella enterica subsp. arizonae NCTC 8297 27.8 [24.4 - 31.4] 23.9 [21.6 - 26.4] 25.8 [23.0 - 29.0] 0.85
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella choleraesuis DSM 14846 28.8 [25.4 - 32.4] 23.9 [21.6 - 26.4] 26.6 [23.7 - 29.7] 1.65
'Escherichia coli SMS-3-5' (CP000970) Salmonella choleraesuis DSM 14846 30.3 [26.9 - 33.9] 23.9 [21.6 - 26.3] 27.7 [24.8 - 30.8] 1.64
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella enterica LT2 31.0 [27.7 - 34.6] 23.9 [21.6 - 26.4] 28.3 [25.4 - 31.4] 1.68
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella typhimurium JCM 1652 29.0 [25.6 - 32.6] 23.9 [21.6 - 26.3] 26.8 [23.9 - 29.9] 1.67
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella choleraesuis DSM 14846 28.7 [25.4 - 32.4] 23.9 [21.6 - 26.4] 26.6 [23.7 - 29.7] 1.75
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella typhimurium JCM 1652 29.7 [26.4 - 33.4] 23.9 [21.6 - 26.3] 27.3 [24.4 - 30.4] 1.58
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella choleraesuis DSM 14846 31.9 [28.5 - 35.5] 23.9 [21.6 - 26.4] 28.9 [26.0 - 32.0] 1.34
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella typhimurium ATCC 13311 31.4 [28.0 - 35.0] 23.9 [21.6 - 26.4] 28.6 [25.6 - 31.7] 1.55
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella typhimurium ATCC 13311 30.0 [26.6 - 33.6] 23.9 [21.6 - 26.4] 27.5 [24.6 - 30.6] 1.36
'Escherichia fergusonii ECD227' (CM001142) Citrobacter amalonaticus NCTC 10805 33.7 [30.3 - 37.3] 23.9 [21.6 - 26.4] 30.2 [27.3 - 33.3] 3.42
'Escherichia coli SMS-3-5' (CP000970) Salmonella typhimurium JCM 1652 30.6 [27.2 - 34.2] 23.9 [21.6 - 26.3] 27.9 [25.0 - 31.0] 1.57
'Escherichia coli IAI39' (CU928164) Salmonella choleraesuis DSM 14846 29.7 [26.3 - 33.3] 23.9 [21.6 - 26.4] 27.3 [24.4 - 30.4] 1.51
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella enterica subsp. arizonae NCTC 8297 31.3 [27.9 - 34.9] 23.9 [21.6 - 26.4] 28.5 [25.6 - 31.6] 0.72
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella typhimurium ATCC 13311 29.0 [25.6 - 32.6] 23.9 [21.6 - 26.4] 26.8 [23.9 - 29.9] 2.23
'Escherichia coli S88' (CU928161) Salmonella typhimurium ATCC 13311 31.2 [27.8 - 34.8] 23.9 [21.6 - 26.4] 28.4 [25.5 - 31.5] 1.43
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella enterica LT2 26.6 [23.2 - 30.2] 23.9 [21.6 - 26.4] 24.9 [22.1 - 28.0] 1.66
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella enterica LT2 31.0 [27.7 - 34.6] 23.9 [21.6 - 26.4] 28.3 [25.4 - 31.4] 1.68
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella enterica LT2 30.0 [26.6 - 33.6] 23.9 [21.6 - 26.4] 27.5 [24.6 - 30.6] 1.49
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella choleraesuis DSM 14846 29.1 [25.7 - 32.7] 23.9 [21.6 - 26.4] 26.9 [24.0 - 30.0] 1.76
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella enterica LT2 32.0 [28.6 - 35.6] 23.9 [21.6 - 26.3] 29.0 [26.1 - 32.1] 1.66
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella typhimurium JCM 1652 32.2 [28.8 - 35.7] 23.9 [21.6 - 26.4] 29.1 [26.2 - 32.2] 1.26
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella typhi NCTC 8385 28.7 [25.3 - 32.3] 23.9 [21.6 - 26.4] 26.5 [23.6 - 29.6] 2.2
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella enterica LT2 30.4 [27.0 - 34.0] 23.8 [21.5 - 26.2] 27.8 [24.9 - 30.9] 2.3
'Escherichia coli IAI39' (CU928164) Salmonella typhimurium JCM 1652 30.3 [26.9 - 33.9] 23.8 [21.5 - 26.3] 27.7 [24.8 - 30.8] 1.43
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella typhimurium ATCC 13311 30.8 [27.5 - 34.4] 23.8 [21.5 - 26.2] 28.1 [25.2 - 31.2] 2.18
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella typhimurium JCM 1652 29.1 [25.8 - 32.8] 23.8 [21.5 - 26.3] 26.9 [24.0 - 30.0] 1.53
'Escherichia coli UMN026' (CU928163) Salmonella choleraesuis DSM 14846 30.8 [27.4 - 34.4] 23.8 [21.5 - 26.2] 28.1 [25.1 - 31.2] 1.42
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella choleraesuis DSM 14846 29.0 [25.6 - 32.6] 23.8 [21.5 - 26.3] 26.7 [23.8 - 29.8] 1.6
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella typhimurium JCM 1652 26.5 [23.1 - 30.1] 23.8 [21.5 - 26.3] 24.8 [21.9 - 27.9] 1.49
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella choleraesuis DSM 14846 26.4 [23.0 - 30.0] 23.8 [21.5 - 26.3] 24.7 [21.9 - 27.8] 1.56
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella choleraesuis DSM 14846 31.4 [28.0 - 34.9] 23.8 [21.5 - 26.2] 28.5 [25.6 - 31.6] 1.56
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella choleraesuis DSM 14846 29.3 [25.9 - 32.9] 23.8 [21.5 - 26.3] 27.0 [24.1 - 30.1] 1.39
'Escherichia coli UMN026' (CU928163) Salmonella typhimurium JCM 1652 31.6 [28.3 - 35.2] 23.8 [21.5 - 26.3] 28.7 [25.8 - 31.8] 1.35
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella typhimurium JCM 1652 29.6 [26.2 - 33.2] 23.8 [21.5 - 26.2] 27.2 [24.3 - 30.3] 1.31
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella typhimurium ATCC 13311 32.2 [28.9 - 35.8] 23.8 [21.5 - 26.3] 29.2 [26.2 - 32.3] 1.54
'Escherichia coli UMN026' (CU928163) Salmonella enterica subsp. arizonae NCTC 8297 29.8 [26.4 - 33.4] 23.8 [21.5 - 26.3] 27.3 [24.4 - 30.4] 0.8
'Escherichia coli S88' (CU928161) Salmonella typhimurium JCM 1652 30.8 [27.4 - 34.4] 23.7 [21.4 - 26.2] 28.1 [25.1 - 31.2] 1.38
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella enterica subsp. arizonae NCTC 8297 28.6 [25.2 - 32.2] 23.7 [21.4 - 26.2] 26.4 [23.5 - 29.5] 0.98
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella typhimurium JCM 1652 31.0 [27.6 - 34.6] 23.7 [21.4 - 26.1] 28.2 [25.3 - 31.3] 1.5
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella typhimurium JCM 1652 31.0 [27.6 - 34.6] 23.7 [21.4 - 26.1] 28.2 [25.3 - 31.3] 1.5
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella typhimurium JCM 1652 28.8 [25.4 - 32.4] 23.7 [21.4 - 26.2] 26.6 [23.7 - 29.7] 2.18
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella enterica subsp. arizonae NCTC 8297 27.9 [24.5 - 31.5] 23.7 [21.4 - 26.1] 25.9 [23.0 - 29.0] 1.13
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella enterica subsp. arizonae NCTC 8297 28.3 [25.0 - 32.0] 23.7 [21.4 - 26.2] 26.2 [23.3 - 29.3] 1.15
'Escherichia coli S88' (CU928161) Salmonella choleraesuis DSM 14846 30.4 [27.0 - 34.0] 23.7 [21.4 - 26.2] 27.8 [24.8 - 30.9] 1.46
'Escherichia coli SMS-3-5' (CP000970) Salmonella enterica subsp. arizonae NCTC 8297 30.1 [26.7 - 33.7] 23.7 [21.4 - 26.2] 27.6 [24.7 - 30.7] 1.02
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella enterica subsp. arizonae NCTC 8297 28.0 [24.7 - 31.7] 23.7 [21.4 - 26.1] 26.0 [23.1 - 29.1] 1.64
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella typhimurium JCM 1652 31.9 [28.5 - 35.5] 23.7 [21.4 - 26.2] 28.9 [25.9 - 32.0] 1.49
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella choleraesuis DSM 14846 30.4 [27.0 - 34.0] 23.7 [21.4 - 26.1] 27.7 [24.8 - 30.9] 1.58
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella enterica subsp. arizonae NCTC 8297 30.2 [26.8 - 33.8] 23.7 [21.4 - 26.1] 27.6 [24.7 - 30.7] 0.95
'Escherichia coli S88' (CU928161) Salmonella enterica subsp. arizonae NCTC 8297 29.5 [26.1 - 33.1] 23.7 [21.4 - 26.2] 27.1 [24.2 - 30.2] 0.84
'Escherichia coli IAI39' (CU928164) Salmonella enterica subsp. arizonae NCTC 8297 30.3 [26.9 - 33.9] 23.7 [21.4 - 26.2] 27.7 [24.8 - 30.8] 0.89
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella choleraesuis DSM 14846 30.4 [27.0 - 34.0] 23.7 [21.4 - 26.1] 27.7 [24.8 - 30.9] 1.58
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella choleraesuis DSM 14846 30.1 [26.8 - 33.7] 23.7 [21.4 - 26.2] 27.6 [24.7 - 30.7] 2.2
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella enterica subsp. arizonae NCTC 8297 28.8 [25.5 - 32.4] 23.6 [21.3 - 26.1] 26.6 [23.7 - 29.7] 0.77
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella enterica subsp. arizonae NCTC 8297 29.9 [26.5 - 33.5] 23.6 [21.3 - 26.1] 27.4 [24.4 - 30.5] 0.96
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella typhimurium JCM 1652 30.4 [27.1 - 34.0] 23.6 [21.3 - 26.0] 27.8 [24.8 - 30.9] 2.13
'Escherichia sp. TW09308' (AEME00000000) Salmonella enterica LT2 30.1 [26.7 - 33.7] 23.6 [21.3 - 26.1] 27.5 [24.6 - 30.6] 1.96
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella enterica subsp. arizonae NCTC 8297 28.3 [25.0 - 31.9] 23.6 [21.3 - 26.1] 26.2 [23.3 - 29.3] 1.03
'Escherichia coli UMN026' (CU928163) Salmonella bongori NCTC 12419 30.1 [26.8 - 33.7] 23.6 [21.3 - 26.0] 27.5 [24.6 - 30.6] 0.61
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella bongori NCTC 12419 28.2 [24.9 - 31.9] 23.6 [21.3 - 26.0] 26.1 [23.2 - 29.2] 0.66
'Escherichia coli IAI39' (CU928164) Salmonella bongori NCTC 12419 29.8 [26.4 - 33.4] 23.6 [21.3 - 26.0] 27.3 [24.4 - 30.4] 0.7
'Escherichia sp. TW09308' (AEME00000000) Salmonella typhimurium ATCC 13311 29.8 [26.5 - 33.4] 23.6 [21.3 - 26.1] 27.3 [24.4 - 30.4] 1.84
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella bongori NCTC 12419 32.0 [28.6 - 35.5] 23.6 [21.3 - 26.0] 28.9 [26.0 - 32.0] 0.53
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella choleraesuis DSM 14846 28.6 [25.2 - 32.2] 23.6 [21.3 - 26.1] 26.4 [23.5 - 29.5] 2.25
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella enterica subsp. arizonae NCTC 8297 26.4 [23.0 - 30.0] 23.6 [21.3 - 26.1] 24.7 [21.8 - 27.8] 0.95
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella enterica subsp. arizonae NCTC 8297 29.9 [26.5 - 33.5] 23.6 [21.3 - 26.1] 27.4 [24.4 - 30.5] 0.96
'Escherichia fergusonii ECD227' (CM001142) Salmonella typhimurium ATCC 13311 31.2 [27.8 - 34.8] 23.5 [21.2 - 26.0] 28.3 [25.4 - 31.4] 2.1
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella bongori NCTC 12419 28.7 [25.4 - 32.4] 23.5 [21.2 - 25.9] 26.5 [23.6 - 29.6] 0.95
'Escherichia sp. TW09308' (AEME00000000) Salmonella choleraesuis DSM 14846 29.4 [26.0 - 33.0] 23.5 [21.2 - 26.0] 27.0 [24.1 - 30.1] 1.86
'Escherichia sp. TW09308' (AEME00000000) Salmonella typhimurium JCM 1652 29.6 [26.2 - 33.2] 23.5 [21.2 - 25.9] 27.1 [24.2 - 30.2] 1.79
'Escherichia fergusonii ECD227' (CM001142) Salmonella typhi NCTC 8385 29.8 [26.5 - 33.4] 23.5 [21.2 - 26.0] 27.3 [24.4 - 30.4] 2.08
'Escherichia coli S88' (CU928161) Salmonella bongori NCTC 12419 30.3 [26.9 - 33.9] 23.5 [21.2 - 25.9] 27.6 [24.7 - 30.7] 0.65
'Escherichia fergusonii ECD227' (CM001142) Salmonella enterica LT2 30.7 [27.4 - 34.3] 23.5 [21.2 - 26.0] 28.0 [25.1 - 31.1] 2.23
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella bongori NCTC 12419 29.1 [25.8 - 32.7] 23.5 [21.2 - 25.9] 26.8 [23.9 - 29.9] 0.79
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Pseudocitrobacter faecalis DSM 27453 24.7 [21.4 - 28.3] 23.5 [21.2 - 26.0] 23.4 [20.5 - 26.5] 2.35
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella enterica subsp. arizonae NCTC 8297 29.2 [25.9 - 32.9] 23.5 [21.2 - 26.0] 26.9 [24.0 - 30.0] 1.58
'Escherichia coli SMS-3-5' (CP000970) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.5 [21.2 - 26.0] 27.6 [24.7 - 30.7] 0.83
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella bongori NCTC 12419 28.5 [25.2 - 32.2] 23.5 [21.2 - 25.9] 26.3 [23.4 - 29.4] 0.84
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.5 [21.2 - 25.9] 27.5 [24.6 - 30.6] 0.75
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella bongori NCTC 12419 28.8 [25.4 - 32.4] 23.5 [21.2 - 25.9] 26.5 [23.6 - 29.6] 1.45
'Escherichia fergusonii ECD227' (CM001142) Salmonella choleraesuis DSM 14846 30.8 [27.4 - 34.4] 23.4 [21.1 - 25.9] 28.0 [25.1 - 31.1] 2.13
'Escherichia sp. TW09308' (AEME00000000) Salmonella enterica subsp. arizonae NCTC 8297 28.9 [25.5 - 32.5] 23.4 [21.1 - 25.9] 26.6 [23.7 - 29.7] 1.24
'Escherichia fergusonii ECD227' (CM001142) Salmonella typhimurium JCM 1652 30.8 [27.4 - 34.4] 23.4 [21.1 - 25.8] 28.0 [25.1 - 31.1] 2.05
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Enterobacter cloacae ATCC 13047 23.4 [20.1 - 27.1] 23.4 [21.1 - 25.9] 22.4 [19.6 - 25.5] 4.7
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella bongori NCTC 12419 28.5 [25.1 - 32.1] 23.4 [21.1 - 25.9] 26.3 [23.4 - 29.4] 0.94
'Escherichia coli UMN026' (CU928163) Pseudocitrobacter faecalis DSM 27453 26.1 [22.7 - 29.7] 23.4 [21.1 - 25.8] 24.4 [21.6 - 27.5] 2.3
'Shigella dysenteriae Sd197' (CP000034) Enterobacter cloacae ATCC 13047 24.6 [21.3 - 28.3] 23.4 [21.2 - 25.9] 23.3 [20.5 - 26.4] 3.33
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.4 [21.1 - 25.9] 27.5 [24.6 - 30.6] 0.77
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.4 [21.1 - 25.9] 27.5 [24.6 - 30.6] 0.77
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella bongori NCTC 12419 29.2 [25.9 - 32.8] 23.4 [21.1 - 25.8] 26.8 [23.9 - 29.9] 1.39
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Pseudocitrobacter faecalis DSM 27453 24.8 [21.5 - 28.4] 23.3 [21.0 - 25.7] 23.4 [20.6 - 26.5] 2.62
'Escherichia fergusonii ECD227' (CM001142) Salmonella enterica subsp. arizonae NCTC 8297 29.0 [25.7 - 32.7] 23.3 [21.0 - 25.8] 26.7 [23.8 - 29.8] 1.51
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella bongori NCTC 12419 26.6 [23.3 - 30.3] 23.3 [21.1 - 25.8] 24.9 [22.0 - 28.0] 0.75
'Shigella dysenteriae Sd197' (CP000034) Pseudocitrobacter faecalis DSM 27453 25.0 [21.7 - 28.7] 23.3 [21.0 - 25.8] 23.6 [20.8 - 26.7] 1.77
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella bongori NCTC 12419 29.2 [25.8 - 32.8] 23.3 [21.0 - 25.8] 26.8 [23.9 - 29.9] 0.58
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Pseudocitrobacter faecalis DSM 27453 23.3 [20.0 - 26.9] 23.2 [21.0 - 25.7] 22.2 [19.4 - 25.3] 2.44
'Escherichia sp. TW09308' (AEME00000000) Salmonella bongori NCTC 12419 29.3 [25.9 - 32.9] 23.2 [20.9 - 25.7] 26.8 [23.9 - 29.9] 1.05
'Escherichia coli O157:H7 str. Sakai' (BA000007) Pseudocitrobacter faecalis DSM 27453 25.0 [21.7 - 28.7] 23.2 [20.9 - 25.6] 23.6 [20.8 - 26.7] 2.48
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Pseudocitrobacter faecalis DSM 27453 24.8 [21.5 - 28.5] 23.1 [20.8 - 25.6] 23.4 [20.6 - 26.5] 2.64
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Pseudocitrobacter faecalis DSM 27453 24.9 [21.6 - 28.6] 23.1 [20.9 - 25.6] 23.5 [20.7 - 26.6] 2.26
'Escherichia coli SMS-3-5' (CP000970) Pseudocitrobacter faecalis DSM 27453 26.0 [22.7 - 29.6] 23.1 [20.8 - 25.6] 24.3 [21.5 - 27.4] 2.52
'Escherichia coli IAI39' (CU928164) Pseudocitrobacter faecalis DSM 27453 25.0 [21.7 - 28.7] 23.1 [20.8 - 25.5] 23.6 [20.7 - 26.7] 2.39
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Pseudocitrobacter faecalis DSM 27453 24.1 [20.8 - 27.7] 23.1 [20.8 - 25.6] 22.8 [20.0 - 25.9] 2.53
'Escherichia fergusonii ECD227' (CM001142) Salmonella bongori NCTC 12419 29.8 [26.4 - 33.4] 23.1 [20.8 - 25.5] 27.2 [24.3 - 30.3] 1.32
'Escherichia coli str. K-12 substr. W3110' (AP009048) Pseudocitrobacter faecalis DSM 27453 27.2 [23.8 - 30.8] 23.0 [20.7 - 25.5] 25.2 [22.3 - 28.3] 2.22
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Pseudocitrobacter faecalis DSM 27453 26.2 [22.9 - 29.8] 23.0 [20.7 - 25.4] 24.5 [21.6 - 27.6] 2.44
'Escherichia coli str. K-12 substr. W3110' (AP009048) Enterobacter cloacae ATCC 13047 25.6 [22.2 - 29.2] 23.0 [20.7 - 25.5] 24.0 [21.1 - 27.1] 3.78
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Pseudocitrobacter faecalis DSM 27453 23.8 [20.5 - 27.4] 23.0 [20.7 - 25.5] 22.6 [19.8 - 25.7] 3.13
'Escherichia fergusonii ATCC 35469' (CU928158) Pseudocitrobacter faecalis DSM 27453 24.5 [21.2 - 28.1] 23.0 [20.7 - 25.5] 23.1 [20.3 - 26.2] 3.08
'Escherichia coli IAI39' (CU928164) Enterobacter cloacae ATCC 13047 24.5 [21.2 - 28.2] 23.0 [20.7 - 25.4] 23.2 [20.3 - 26.2] 3.95
'Escherichia coli str. 'clone D i14'' (CP002212) Pseudocitrobacter faecalis DSM 27453 25.1 [21.7 - 28.7] 22.9 [20.7 - 25.4] 23.6 [20.7 - 26.7] 2.46
'Escherichia coli S88' (CU928161) Enterobacter cloacae ATCC 13047 24.3 [21.0 - 28.0] 22.9 [20.6 - 25.4] 23.0 [20.2 - 26.1] 3.9
'Escherichia coli SMS-3-5' (CP000970) Enterobacter cloacae ATCC 13047 24.9 [21.6 - 28.6] 22.9 [20.6 - 25.4] 23.4 [20.6 - 26.5] 4.09
'Escherichia coli S88' (CU928161) Pseudocitrobacter faecalis DSM 27453 25.4 [22.1 - 29.1] 22.9 [20.6 - 25.3] 23.8 [21.0 - 26.9] 2.34
'Shigella dysenteriae Sd197' (CP000034) Cronobacter sakazakii NBRC 102416 20.1 [16.9 - 23.7] 22.9 [20.7 - 25.4] 19.6 [16.9 - 22.6] 5.47
'Escherichia coli str. 'clone D i2'' (CP002211) Pseudocitrobacter faecalis DSM 27453 25.1 [21.7 - 28.7] 22.9 [20.7 - 25.4] 23.6 [20.7 - 26.7] 2.46
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Enterobacter cloacae ATCC 13047 23.3 [20.0 - 26.9] 22.9 [20.6 - 25.3] 22.2 [19.4 - 25.2] 3.92
'Escherichia coli UMN026' (CU928163) Enterobacter cloacae ATCC 13047 25.0 [21.6 - 28.6] 22.9 [20.6 - 25.4] 23.5 [20.6 - 26.6] 3.87
'Escherichia coli str. 'clone D i2'' (CP002211) Enterobacter cloacae ATCC 13047 23.9 [20.6 - 27.6] 22.8 [20.5 - 25.3] 22.7 [19.9 - 25.8] 4.02
'Escherichia coli O157:H7 str. Sakai' (BA000007) Enterobacter cloacae ATCC 13047 24.0 [20.7 - 27.6] 22.8 [20.5 - 25.2] 22.7 [19.9 - 25.8] 4.05
'Escherichia coli str. 'clone D i14'' (CP002212) Enterobacter cloacae ATCC 13047 23.9 [20.6 - 27.6] 22.8 [20.5 - 25.3] 22.7 [19.9 - 25.8] 4.02
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Enterobacter cloacae ATCC 13047 23.3 [20.1 - 27.0] 22.8 [20.5 - 25.3] 22.2 [19.4 - 25.3] 4.19
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter sakazakii NBRC 102416 19.5 [16.4 - 23.1] 22.8 [20.5 - 25.2] 19.1 [16.4 - 22.1] 6.83
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Enterobacter cloacae ATCC 13047 24.8 [21.5 - 28.5] 22.7 [20.4 - 25.1] 23.3 [20.5 - 26.4] 4.01
'Escherichia sp. TW09308' (AEME00000000) Pseudocitrobacter faecalis DSM 27453 24.5 [21.2 - 28.2] 22.7 [20.4 - 25.1] 23.1 [20.3 - 26.2] 2.74
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Enterobacter cloacae ATCC 13047 24.1 [20.8 - 27.8] 22.7 [20.4 - 25.1] 22.8 [20.0 - 25.9] 3.83
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Enterobacter cloacae ATCC 13047 23.6 [20.3 - 27.2] 22.7 [20.4 - 25.1] 22.4 [19.6 - 25.4] 4.21
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Enterobacter cloacae ATCC 13047 23.0 [19.7 - 26.6] 22.7 [20.4 - 25.1] 21.9 [19.1 - 25.0] 4.1
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Enterobacter cloacae ATCC 13047 22.5 [19.2 - 26.2] 22.7 [20.4 - 25.1] 21.5 [18.7 - 24.6] 4.01
'Escherichia fergusonii ECD227' (CM001142) Pseudocitrobacter faecalis DSM 27453 25.0 [21.6 - 28.6] 22.7 [20.4 - 25.1] 23.5 [20.6 - 26.6] 3.01
'Escherichia fergusonii ATCC 35469' (CU928158) Enterobacter cloacae ATCC 13047 24.8 [21.5 - 28.5] 22.5 [20.2 - 25.0] 23.3 [20.5 - 26.4] 4.65
'Escherichia sp. TW09308' (AEME00000000) Enterobacter cloacae ATCC 13047 23.3 [20.0 - 26.9] 22.3 [20.1 - 24.8] 22.1 [19.3 - 25.2] 4.31
'Escherichia fergusonii ECD227' (CM001142) Enterobacter cloacae ATCC 13047 24.8 [21.4 - 28.4] 22.1 [19.8 - 24.5] 23.2 [20.4 - 26.3] 4.57
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Kosakonia sacchari SP1 20.8 [17.6 - 24.4] 22.1 [19.9 - 24.6] 20.1 [17.4 - 23.1] 3.88
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Kosakonia sacchari SP1 21.5 [18.2 - 25.1] 22.1 [19.8 - 24.5] 20.6 [17.8 - 23.7] 3.89
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Kosakonia sacchari SP1 21.3 [18.1 - 25.0] 22.1 [19.8 - 24.5] 20.5 [17.8 - 23.6] 3.52
'Shigella dysenteriae Sd197' (CP000034) Kosakonia sacchari SP1 21.6 [18.4 - 25.2] 22.1 [19.9 - 24.6] 20.7 [18.0 - 23.8] 3.02
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Kosakonia sacchari SP1 21.2 [18.0 - 24.9] 22.1 [19.8 - 24.5] 20.4 [17.7 - 23.5] 3.6
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Kosakonia sacchari SP1 20.0 [16.9 - 23.6] 22.1 [19.8 - 24.5] 19.5 [16.7 - 22.5] 3.69
'Escherichia coli str. K-12 substr. W3110' (AP009048) Kosakonia sacchari SP1 22.5 [19.2 - 26.1] 22.1 [19.8 - 24.5] 21.4 [18.7 - 24.5] 3.47
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Kosakonia sacchari SP1 21.5 [18.3 - 25.1] 22.0 [19.8 - 24.5] 20.6 [17.9 - 23.7] 3.78
'Escherichia coli S88' (CU928161) Kosakonia sacchari SP1 22.1 [18.8 - 25.7] 22.0 [19.7 - 24.4] 21.1 [18.3 - 24.2] 3.59
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Kosakonia sacchari SP1 21.5 [18.3 - 25.1] 22.0 [19.8 - 24.5] 20.6 [17.9 - 23.7] 4.38
'Escherichia coli O157:H7 str. Sakai' (BA000007) Kosakonia sacchari SP1 21.3 [18.0 - 24.9] 22.0 [19.7 - 24.4] 20.4 [17.7 - 23.5] 3.73
'Escherichia coli IAI39' (CU928164) Kosakonia sacchari SP1 21.8 [18.6 - 25.5] 22.0 [19.7 - 24.4] 20.9 [18.1 - 24.0] 3.64
'Escherichia coli str. 'clone D i2'' (CP002211) Kosakonia sacchari SP1 22.1 [18.8 - 25.7] 21.9 [19.7 - 24.4] 21.1 [18.3 - 24.2] 3.71
'Escherichia coli UMN026' (CU928163) Kosakonia sacchari SP1 22.3 [19.0 - 25.9] 21.9 [19.7 - 24.4] 21.2 [18.4 - 24.3] 3.55
'Escherichia coli SMS-3-5' (CP000970) Kosakonia sacchari SP1 22.1 [18.8 - 25.7] 21.9 [19.7 - 24.4] 21.1 [18.3 - 24.2] 3.77
'Escherichia coli str. 'clone D i14'' (CP002212) Kosakonia sacchari SP1 22.1 [18.8 - 25.7] 21.9 [19.7 - 24.4] 21.1 [18.3 - 24.2] 3.71
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter sakazakii NBRC 102416 20.8 [17.6 - 24.4] 21.9 [19.6 - 24.3] 20.1 [17.3 - 23.1] 5.92
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella typhi NCTC 8385 17.1 [14.1 - 20.7] 21.9 [19.7 - 24.4] 17.0 [14.4 - 20.0] 4.42
'Escherichia sp. TW09308' (AEME00000000) Kosakonia sacchari SP1 21.2 [17.9 - 24.8] 21.9 [19.7 - 24.4] 20.3 [17.6 - 23.4] 3.99
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Kosakonia sacchari SP1 22.4 [19.2 - 26.1] 21.9 [19.6 - 24.3] 21.3 [18.6 - 24.4] 3.69
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Kosakonia oryzendophytica REICA 082 21.2 [18.0 - 24.8] 21.8 [19.5 - 24.2] 20.4 [17.6 - 23.4] 3.24
'Escherichia coli IAI39' (CU928164) Kosakonia oryzendophytica REICA 082 22.0 [18.7 - 25.6] 21.8 [19.5 - 24.2] 21.0 [18.2 - 24.0] 3.1
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter sakazakii NBRC 102416 25.9 [22.6 - 29.6] 21.8 [19.6 - 24.3] 24.0 [21.2 - 27.1] 2.64
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter sakazakii NBRC 102416 18.9 [15.7 - 22.4] 21.8 [19.5 - 24.2] 18.5 [15.8 - 21.5] 6.05
'Shigella dysenteriae Sd197' (CP000034) Cronobacter malonaticus LMG 23826 19.5 [16.3 - 23.1] 21.8 [19.5 - 24.2] 19.0 [16.3 - 22.0] 5.59
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Kosakonia oryzendophytica REICA 082 21.1 [17.9 - 24.7] 21.8 [19.5 - 24.2] 20.3 [17.5 - 23.3] 3.34
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella boydii ATCC 8700 17.4 [14.3 - 20.9] 21.8 [19.5 - 24.2] 17.2 [14.6 - 20.2] 5.39
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Kosakonia oryzendophytica REICA 082 20.8 [17.6 - 24.5] 21.8 [19.5 - 24.2] 20.1 [17.3 - 23.1] 3.84
'Escherichia coli SMS-3-5' (CP000970) Cronobacter sakazakii NBRC 102416 19.8 [16.7 - 23.4] 21.8 [19.6 - 24.3] 19.3 [16.6 - 22.3] 6.22
'Shigella dysenteriae Sd197' (CP000034) Kosakonia oryzendophytica REICA 082 21.9 [18.6 - 25.5] 21.8 [19.5 - 24.2] 20.9 [18.1 - 24.0] 2.48
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Kosakonia oryzendophytica REICA 082 21.3 [18.1 - 25.0] 21.8 [19.5 - 24.2] 20.5 [17.7 - 23.5] 3.06
'Escherichia coli IAI39' (CU928164) Cronobacter sakazakii NBRC 102416 20.1 [16.9 - 23.7] 21.7 [19.5 - 24.2] 19.5 [16.8 - 22.5] 6.09
'Escherichia coli UMN026' (CU928163) Cronobacter sakazakii NBRC 102416 19.7 [16.5 - 23.3] 21.7 [19.5 - 24.2] 19.1 [16.4 - 22.2] 6.0
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella typhimurium ATCC 13311 16.9 [13.9 - 20.4] 21.7 [19.5 - 24.2] 16.8 [14.2 - 19.8] 4.39
'Escherichia coli str. K-12 substr. W3110' (AP009048) Kosakonia oryzendophytica REICA 082 22.9 [19.6 - 26.6] 21.7 [19.4 - 24.1] 21.7 [18.9 - 24.8] 2.93
'Escherichia fergusonii ATCC 35469' (CU928158) Kosakonia sacchari SP1 22.4 [19.2 - 26.1] 21.7 [19.4 - 24.1] 21.3 [18.5 - 24.4] 4.33
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter malonaticus LMG 23826 19.2 [16.1 - 22.8] 21.7 [19.4 - 24.1] 18.7 [16.1 - 21.8] 6.47
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter malonaticus LMG 23826 19.4 [16.2 - 23.0] 21.7 [19.4 - 24.1] 18.9 [16.2 - 21.9] 6.96
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella enterica LT2 16.8 [13.8 - 20.4] 21.7 [19.4 - 24.1] 16.8 [14.2 - 19.7] 4.27
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter sakazakii NBRC 102416 18.1 [15.1 - 21.7] 21.7 [19.4 - 24.1] 17.9 [15.2 - 20.8] 6.14
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter sakazakii NBRC 102416 19.2 [16.1 - 22.8] 21.7 [19.4 - 24.1] 18.8 [16.1 - 21.8] 6.34
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter malonaticus LMG 23826 26.3 [23.0 - 30.0] 21.7 [19.5 - 24.2] 24.3 [21.5 - 27.4] 2.77
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella bongori NCTC 12419 16.9 [13.8 - 20.4] 21.7 [19.4 - 24.1] 16.8 [14.2 - 19.7] 5.18
'Escherichia coli SMS-3-5' (CP000970) Cronobacter malonaticus LMG 23826 19.5 [16.3 - 23.1] 21.7 [19.4 - 24.1] 19.0 [16.3 - 22.0] 6.35
'Escherichia fergusonii ECD227' (CM001142) Kosakonia sacchari SP1 22.1 [18.9 - 25.8] 21.6 [19.4 - 24.1] 21.1 [18.3 - 24.2] 4.26
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Kosakonia oryzendophytica REICA 082 22.0 [18.8 - 25.7] 21.6 [19.3 - 24.0] 21.0 [18.2 - 24.1] 2.98
'Escherichia coli S88' (CU928161) Kosakonia oryzendophytica REICA 082 22.5 [19.3 - 26.2] 21.6 [19.4 - 24.1] 21.4 [18.6 - 24.5] 3.05
'Escherichia coli IAI39' (CU928164) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.3] 21.6 [19.3 - 24.0] 19.2 [16.5 - 22.2] 6.21
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter muytjensii ATCC 51329 24.6 [21.3 - 28.3] 21.6 [19.3 - 24.0] 23.0 [20.2 - 26.1] 3.64
'Escherichia coli str. 'clone D i14'' (CP002212) Kosakonia oryzendophytica REICA 082 22.7 [19.4 - 26.3] 21.6 [19.3 - 24.0] 21.5 [18.7 - 24.6] 3.17
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter sakazakii NBRC 102416 19.2 [16.1 - 22.8] 21.6 [19.4 - 24.1] 18.8 [16.1 - 21.8] 6.33
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia hermannii NCTC 12129 19.6 [16.4 - 23.2] 21.6 [19.4 - 24.1] 19.0 [16.3 - 22.1] 4.19
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Kosakonia oryzendophytica REICA 082 21.6 [18.3 - 25.2] 21.6 [19.4 - 24.1] 20.6 [17.9 - 23.7] 3.35
'Escherichia coli str. 'clone D i2'' (CP002211) Kosakonia oryzendophytica REICA 082 22.7 [19.4 - 26.3] 21.6 [19.3 - 24.0] 21.5 [18.7 - 24.6] 3.17
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter sakazakii NBRC 102416 19.3 [16.1 - 22.9] 21.6 [19.4 - 24.1] 18.8 [16.1 - 21.8] 6.18
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Kosakonia oryzendophytica REICA 082 22.6 [19.3 - 26.2] 21.6 [19.3 - 24.0] 21.4 [18.7 - 24.5] 3.15
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter sakazakii NBRC 102416 19.4 [16.3 - 23.0] 21.6 [19.4 - 24.0] 18.9 [16.2 - 21.9] 6.23
'Escherichia coli SMS-3-5' (CP000970) Kosakonia oryzendophytica REICA 082 22.8 [19.6 - 26.5] 21.6 [19.4 - 24.1] 21.6 [18.8 - 24.7] 3.23
'Escherichia coli UMN026' (CU928163) Kosakonia oryzendophytica REICA 082 22.4 [19.1 - 26.0] 21.6 [19.4 - 24.1] 21.3 [18.5 - 24.4] 3.01
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Enterobacter cloacae ATCC 13047 22.5 [19.2 - 26.2] 21.6 [19.4 - 24.1] 21.4 [18.6 - 24.5] 0.51
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter sakazakii NBRC 102416 19.2 [16.1 - 22.8] 21.6 [19.3 - 24.0] 18.8 [16.1 - 21.8] 6.78
'Escherichia coli S88' (CU928161) Cronobacter sakazakii NBRC 102416 20.3 [17.1 - 23.9] 21.6 [19.4 - 24.1] 19.6 [16.9 - 22.6] 6.04
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Kosakonia oryzendophytica REICA 082 20.1 [16.9 - 23.7] 21.6 [19.3 - 24.0] 19.4 [16.7 - 22.5] 3.15
'Escherichia coli O157:H7 str. Sakai' (BA000007) Kosakonia oryzendophytica REICA 082 21.7 [18.4 - 25.3] 21.6 [19.3 - 24.0] 20.7 [18.0 - 23.8] 3.19
'Escherichia coli S88' (CU928161) Cronobacter malonaticus LMG 23826 19.9 [16.7 - 23.5] 21.5 [19.2 - 23.9] 19.3 [16.5 - 22.3] 6.16
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter malonaticus LMG 23826 20.5 [17.3 - 24.1] 21.5 [19.3 - 23.9] 19.8 [17.0 - 22.8] 6.04
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.3] 21.5 [19.2 - 23.9] 19.2 [16.5 - 22.2] 6.27
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter sakazakii NBRC 102416 20.0 [16.9 - 23.6] 21.5 [19.3 - 23.9] 19.4 [16.7 - 22.4] 6.16
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Citrobacter koseri NCTC 10786 18.5 [15.4 - 22.1] 21.5 [19.2 - 23.9] 18.2 [15.5 - 21.2] 2.7
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter sakazakii NBRC 102416 20.0 [16.9 - 23.6] 21.5 [19.3 - 23.9] 19.4 [16.7 - 22.4] 6.16
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter malonaticus LMG 23826 19.1 [15.9 - 22.7] 21.5 [19.3 - 24.0] 18.6 [15.9 - 21.6] 6.45
'Escherichia coli UMN026' (CU928163) Cronobacter malonaticus LMG 23826 19.7 [16.5 - 23.3] 21.5 [19.3 - 23.9] 19.1 [16.4 - 22.1] 6.13
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Levinea malonatica NCTC 10810 22.7 [19.4 - 26.3] 21.5 [19.2 - 23.9] 21.5 [18.7 - 24.5] 0.29
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter malonaticus LMG 23826 19.4 [16.2 - 23.0] 21.5 [19.2 - 23.9] 18.9 [16.2 - 21.9] 6.31
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.4] 21.5 [19.2 - 23.9] 19.2 [16.5 - 22.2] 6.28
'Shigella dysenteriae Sd197' (CP000034) Shimwellia blattae DSM 4481 17.2 [14.2 - 20.7] 21.5 [19.2 - 23.9] 17.1 [14.5 - 20.0] 5.26
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter malonaticus LMG 23826 18.3 [15.2 - 21.8] 21.5 [19.3 - 23.9] 18.0 [15.3 - 20.9] 6.27
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.4] 21.5 [19.2 - 23.9] 19.2 [16.5 - 22.2] 6.28
'Shigella dysenteriae Sd197' (CP000034) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.2 [14.2 - 20.7] 21.5 [19.2 - 23.9] 17.1 [14.5 - 20.0] 5.26
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter sakazakii NBRC 102416 19.8 [16.7 - 23.4] 21.5 [19.3 - 23.9] 19.2 [16.5 - 22.3] 6.14
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter malonaticus LMG 23826 19.2 [16.1 - 22.8] 21.5 [19.2 - 23.9] 18.7 [16.1 - 21.7] 6.36
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella dysenteriae ATCC 13313 17.1 [14.1 - 20.7] 21.5 [19.2 - 23.9] 17.0 [14.4 - 20.0] 5.53
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella typhi NCTC 8385 19.4 [16.2 - 23.0] 21.5 [19.2 - 23.9] 18.9 [16.2 - 21.9] 1.99
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Citrobacter diversus NCTC 10849 22.8 [19.5 - 26.5] 21.5 [19.2 - 23.9] 21.6 [18.8 - 24.7] 0.49
'Shigella dysenteriae Sd197' (CP000034) Cronobacter muytjensii ATCC 51329 19.2 [16.1 - 22.8] 21.5 [19.2 - 23.9] 18.7 [16.1 - 21.8] 6.47
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter malonaticus LMG 23826 19.0 [15.9 - 22.6] 21.5 [19.2 - 23.9] 18.6 [15.9 - 21.6] 6.18
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter sakazakii NBRC 102416 20.0 [16.9 - 23.7] 21.5 [19.3 - 24.0] 19.4 [16.7 - 22.4] 5.97
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.3 [14.3 - 20.9] 21.4 [19.1 - 23.8] 17.2 [14.6 - 20.1] 5.71
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella sonnei ATCC 29930 17.2 [14.2 - 20.7] 21.4 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.49
'Escherichia coli S88' (CU928161) Escherichia hermannii NCTC 12129 20.2 [17.0 - 23.8] 21.4 [19.2 - 23.9] 19.5 [16.8 - 22.6] 3.4
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella typhimurium ATCC 13311 19.7 [16.6 - 23.4] 21.4 [19.1 - 23.8] 19.2 [16.5 - 22.2] 1.96
'Escherichia coli SMS-3-5' (CP000970) Cronobacter muytjensii ATCC 51329 19.2 [16.1 - 22.8] 21.4 [19.2 - 23.9] 18.7 [16.0 - 21.7] 7.22
'Escherichia fergusonii ATCC 35469' (CU928158) Kosakonia oryzendophytica REICA 082 22.9 [19.6 - 26.5] 21.4 [19.1 - 23.8] 21.6 [18.8 - 24.7] 3.79
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shimwellia blattae DSM 4481 17.3 [14.3 - 20.9] 21.4 [19.1 - 23.8] 17.2 [14.6 - 20.1] 5.71
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter malonaticus LMG 23826 19.5 [16.4 - 23.1] 21.4 [19.2 - 23.9] 19.0 [16.3 - 22.0] 6.91
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Citrobacter diversus NCTC 10849 18.6 [15.5 - 22.2] 21.4 [19.2 - 23.8] 18.2 [15.6 - 21.2] 2.92
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.5 [16.3 - 23.1] 21.4 [19.2 - 23.9] 18.9 [16.2 - 21.9] 4.19
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter malonaticus LMG 23826 19.6 [16.4 - 23.2] 21.4 [19.1 - 23.8] 19.0 [16.3 - 22.1] 6.09
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia fergusonii ATCC 35469' (CU928158) 17.6 [14.5 - 21.1] 21.4 [19.2 - 23.8] 17.4 [14.8 - 20.4] 6.57
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Citrobacter koseri NCTC 10786 22.6 [19.3 - 26.2] 21.4 [19.1 - 23.8] 21.4 [18.6 - 24.5] 0.27
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia fergusonii ATCC 35469 17.6 [14.5 - 21.1] 21.4 [19.2 - 23.8] 17.3 [14.7 - 20.3] 6.59
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella flexneri ATCC 29903 17.2 [14.2 - 20.8] 21.4 [19.2 - 23.9] 17.1 [14.5 - 20.0] 5.84
'Escherichia fergusonii ATCC 35469' (CU928158) Shimwellia blattae DSM 4481 17.6 [14.5 - 21.1] 21.4 [19.2 - 23.8] 17.4 [14.8 - 20.4] 6.57
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter muytjensii ATCC 51329 18.6 [15.5 - 22.2] 21.3 [19.1 - 23.8] 18.2 [15.6 - 21.2] 7.34
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli IAI39' (CU928164) 17.3 [14.2 - 20.8] 21.3 [19.0 - 23.7] 17.1 [14.5 - 20.1] 5.88
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter muytjensii ATCC 51329 19.1 [15.9 - 22.7] 21.3 [19.0 - 23.7] 18.6 [15.9 - 21.6] 7.32
'Escherichia sp. TW09308' (AEME00000000) Kosakonia oryzendophytica REICA 082 22.4 [19.1 - 26.0] 21.3 [19.0 - 23.7] 21.2 [18.5 - 24.3] 3.45
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia coli DSM 30083 17.2 [14.1 - 20.7] 21.3 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.87
'Escherichia coli IAI39' (CU928164) Cronobacter muytjensii ATCC 51329 19.5 [16.3 - 23.1] 21.3 [19.0 - 23.7] 18.9 [16.2 - 21.9] 7.08
'Shigella dysenteriae Sd197' (CP000034) Cronobacter condimenti 1330 18.8 [15.7 - 22.4] 21.3 [19.0 - 23.7] 18.4 [15.7 - 21.4] 4.52
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella typhimurium JCM 1652 16.7 [13.6 - 20.2] 21.3 [19.0 - 23.7] 16.6 [14.0 - 19.5] 4.45
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.5 [13.9 - 19.4] 6.02
'Escherichia coli S88' (CU928161) Shimwellia blattae DSM 4481 17.2 [14.1 - 20.7] 21.3 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.83
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli UMN026' (CU928163) 17.3 [14.2 - 20.8] 21.3 [19.1 - 23.8] 17.1 [14.5 - 20.1] 5.79
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella enterica LT2 19.7 [16.6 - 23.3] 21.3 [19.1 - 23.7] 19.1 [16.4 - 22.2] 1.84
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli S88' (CU928161) 17.2 [14.1 - 20.7] 21.3 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.83
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter muytjensii ATCC 51329 18.0 [14.9 - 21.6] 21.3 [19.0 - 23.7] 17.7 [15.1 - 20.7] 7.14
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Levinea malonatica NCTC 10810 18.7 [15.6 - 22.3] 21.3 [19.1 - 23.8] 18.3 [15.7 - 21.3] 2.73
'Escherichia coli UMN026' (CU928163) Shimwellia blattae DSM 4481 17.3 [14.2 - 20.8] 21.3 [19.1 - 23.8] 17.1 [14.5 - 20.1] 5.79
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia albertii NBRC 107761 19.6 [16.5 - 23.3] 21.3 [19.1 - 23.7] 19.1 [16.4 - 22.1] 4.29
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.4 [13.9 - 19.4] 5.84
'Escherichia fergusonii ECD227' (CM001142) Kosakonia oryzendophytica REICA 082 22.6 [19.3 - 26.2] 21.3 [19.1 - 23.8] 21.4 [18.6 - 24.5] 3.72
'Escherichia coli IAI39' (CU928164) Shimwellia blattae DSM 4481 17.3 [14.2 - 20.8] 21.3 [19.0 - 23.7] 17.1 [14.5 - 20.1] 5.88
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shimwellia blattae DSM 4481 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.5 [13.9 - 19.4] 6.02
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shimwellia blattae DSM 4481 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.4 [13.9 - 19.4] 5.84
'Escherichia fergusonii ECD227' (CM001142) Cronobacter sakazakii NBRC 102416 19.3 [16.2 - 22.9] 21.3 [19.1 - 23.7] 18.8 [16.1 - 21.8] 6.71
'Escherichia sp. TW09308' (AEME00000000) Cronobacter sakazakii NBRC 102416 19.2 [16.0 - 22.8] 21.3 [19.1 - 23.7] 18.7 [16.0 - 21.7] 6.44
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter condimenti 1330 17.8 [14.7 - 21.3] 21.2 [19.0 - 23.6] 17.5 [14.9 - 20.5] 5.2
'Escherichia coli UMN026' (CU928163) Cronobacter muytjensii ATCC 51329 19.5 [16.3 - 23.0] 21.2 [19.0 - 23.6] 18.9 [16.2 - 21.9] 7.0
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia hermannii NCTC 12129 21.5 [18.3 - 25.1] 21.2 [18.9 - 23.6] 20.5 [17.8 - 23.6] 3.28
'Shigella dysenteriae Sd197' (CP000034) Escherichia hermannii NCTC 12129 20.4 [17.3 - 24.1] 21.2 [18.9 - 23.6] 19.7 [17.0 - 22.7] 2.83
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia hermannii NCTC 12129 19.3 [16.2 - 22.9] 21.2 [19.0 - 23.6] 18.8 [16.1 - 21.8] 3.7
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella enterica subsp. arizonae NCTC 8297 17.1 [14.1 - 20.6] 21.2 [19.0 - 23.6] 17.0 [14.4 - 19.9] 4.99
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter muytjensii ATCC 51329 20.3 [17.1 - 23.9] 21.2 [18.9 - 23.6] 19.5 [16.8 - 22.6] 6.92
'Escherichia coli str. 'clone D i2'' (CP002211) Shimwellia blattae DSM 4481 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shimwellia blattae DSM 4481 16.4 [13.4 - 19.9] 21.2 [19.0 - 23.6] 16.3 [13.8 - 19.3] 6.13
'Escherichia fergusonii ECD227' (CM001142) Cronobacter malonaticus LMG 23826 19.5 [16.4 - 23.1] 21.2 [18.9 - 23.6] 18.9 [16.3 - 22.0] 6.83
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia hermannii NCTC 12129 20.2 [17.0 - 23.8] 21.2 [19.0 - 23.6] 19.5 [16.8 - 22.6] 3.52
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella typhimurium JCM 1652 19.6 [16.4 - 23.2] 21.2 [19.0 - 23.6] 19.0 [16.3 - 22.0] 2.01
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia hermannii NCTC 12129 18.5 [15.4 - 22.0] 21.2 [19.0 - 23.7] 18.1 [15.4 - 21.1] 2.43
'Escherichia coli SMS-3-5' (CP000970) Shimwellia blattae DSM 4481 17.3 [14.2 - 20.8] 21.2 [19.0 - 23.7] 17.1 [14.5 - 20.1] 6.01
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli str. 'clone D i14'' (CP002212) 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli str. 'clone D i2'' (CP002211) 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter muytjensii ATCC 51329 18.8 [15.7 - 22.4] 21.2 [19.0 - 23.6] 18.4 [15.7 - 21.4] 7.05
'Escherichia coli SMS-3-5' (CP000970) Escherichia hermannii NCTC 12129 20.8 [17.6 - 24.4] 21.2 [18.9 - 23.6] 19.9 [17.2 - 23.0] 3.58
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter muytjensii ATCC 51329 19.2 [16.0 - 22.7] 21.2 [19.0 - 23.6] 18.7 [16.0 - 21.7] 7.18
'Escherichia coli IAI39' (CU928164) Escherichia hermannii NCTC 12129 20.2 [17.0 - 23.8] 21.2 [18.9 - 23.6] 19.5 [16.8 - 22.5] 3.45
'Escherichia coli str. 'clone D i14'' (CP002212) Shimwellia blattae DSM 4481 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter muytjensii ATCC 51329 18.9 [15.8 - 22.5] 21.2 [19.0 - 23.7] 18.4 [15.8 - 21.4] 7.23
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shimwellia blattae DSM 4481 17.2 [14.2 - 20.7] 21.2 [19.0 - 23.7] 17.0 [14.4 - 20.0] 6.63
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shimwellia blattae DSM 4481 16.0 [13.1 - 19.5] 21.2 [19.0 - 23.6] 16.0 [13.5 - 18.9] 5.93
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia hermannii NCTC 12129 19.2 [16.1 - 22.8] 21.2 [19.0 - 23.7] 18.7 [16.1 - 21.7] 3.59
'Escherichia coli SMS-3-5' (CP000970) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.3 [14.2 - 20.8] 21.2 [19.0 - 23.7] 17.1 [14.5 - 20.1] 6.01
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia hermannii NCTC 12129 19.6 [16.5 - 23.2] 21.2 [18.9 - 23.6] 19.0 [16.3 - 22.1] 3.68
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia hermannii NCTC 12129 20.2 [17.0 - 23.8] 21.2 [19.0 - 23.6] 19.5 [16.8 - 22.6] 3.52
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella boydii ATCC 8700 20.2 [17.0 - 23.8] 21.2 [18.9 - 23.6] 19.5 [16.8 - 22.5] 2.96
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.0 [13.1 - 19.5] 21.2 [19.0 - 23.6] 16.0 [13.5 - 18.9] 5.93
'Escherichia coli S88' (CU928161) Cronobacter muytjensii ATCC 51329 19.5 [16.3 - 23.1] 21.2 [18.9 - 23.6] 18.9 [16.2 - 21.9] 7.03
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.6] 16.7 [14.1 - 19.6] 5.97
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.2 [14.2 - 20.7] 21.2 [19.0 - 23.7] 17.0 [14.4 - 20.0] 6.63
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.4 [13.4 - 19.9] 21.2 [19.0 - 23.6] 16.3 [13.8 - 19.3] 6.13
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella choleraesuis DSM 14846 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.6] 16.7 [14.1 - 19.6] 4.37
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shimwellia blattae DSM 4481 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.6] 16.7 [14.1 - 19.6] 5.97
'Escherichia sp. TW09308' (AEME00000000) Cronobacter malonaticus LMG 23826 19.4 [16.3 - 23.0] 21.2 [18.9 - 23.6] 18.9 [16.2 - 21.9] 6.57
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.2 [16.1 - 22.8] 21.1 [18.8 - 23.5] 18.7 [16.0 - 21.7] 3.59
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.8 [13.8 - 20.3] 21.1 [18.9 - 23.6] 16.7 [14.1 - 19.6] 5.76
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter condimenti 1330 24.0 [20.7 - 27.7] 21.1 [18.9 - 23.6] 22.5 [19.7 - 25.6] 1.69
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia hermannii NCTC 12129 21.0 [17.8 - 24.6] 21.1 [18.8 - 23.5] 20.1 [17.4 - 23.1] 4.14
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella sonnei ATCC 29930 19.8 [16.6 - 23.4] 21.1 [18.9 - 23.6] 19.2 [16.5 - 22.2] 3.06
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter muytjensii ATCC 51329 19.4 [16.3 - 23.0] 21.1 [18.9 - 23.6] 18.9 [16.2 - 21.9] 7.14
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter muytjensii ATCC 51329 19.0 [15.9 - 22.6] 21.1 [18.8 - 23.5] 18.5 [15.9 - 21.5] 7.83
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter condimenti 1330 18.9 [15.7 - 22.5] 21.1 [18.9 - 23.6] 18.4 [15.7 - 21.4] 5.23
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shimwellia blattae DSM 4481 16.8 [13.8 - 20.3] 21.1 [18.9 - 23.6] 16.7 [14.1 - 19.6] 5.76
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter muytjensii ATCC 51329 19.5 [16.4 - 23.1] 21.1 [18.9 - 23.5] 18.9 [16.2 - 22.0] 7.16
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella choleraesuis DSM 14846 19.6 [16.5 - 23.2] 21.1 [18.9 - 23.5] 19.0 [16.3 - 22.0] 1.94
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter condimenti 1330 19.4 [16.3 - 23.0] 21.1 [18.9 - 23.5] 18.9 [16.2 - 21.9] 4.97
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shimwellia blattae DSM 4481 16.5 [13.5 - 20.0] 21.1 [18.9 - 23.5] 16.4 [13.9 - 19.4] 6.12
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Citrobacter amalonaticus NCTC 10805 18.0 [14.9 - 21.5] 21.1 [18.9 - 23.5] 17.7 [15.0 - 20.7] 3.08
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia hermannii NCTC 12129 20.2 [17.0 - 23.8] 21.1 [18.9 - 23.5] 19.5 [16.8 - 22.5] 3.54
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter condimenti 1330 18.7 [15.6 - 22.3] 21.1 [18.9 - 23.5] 18.3 [15.6 - 21.3] 5.38
'Escherichia fergusonii ECD227' (CM001142) Cronobacter muytjensii ATCC 51329 19.0 [15.9 - 22.6] 21.1 [18.9 - 23.5] 18.5 [15.8 - 21.5] 7.7
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter sakazakii NBRC 102416 20.0 [16.8 - 23.6] 21.1 [18.9 - 23.6] 19.3 [16.6 - 22.3] 0.21
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.5 [13.5 - 20.0] 21.1 [18.9 - 23.5] 16.4 [13.9 - 19.4] 6.12
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter condimenti 1330 19.4 [16.2 - 23.0] 21.1 [18.8 - 23.5] 18.8 [16.1 - 21.8] 5.21
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter muytjensii ATCC 51329 19.3 [16.2 - 22.9] 21.1 [18.9 - 23.5] 18.8 [16.1 - 21.8] 6.96
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter condimenti 1330 19.4 [16.2 - 23.0] 21.1 [18.8 - 23.5] 18.8 [16.1 - 21.8] 5.21
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia hermannii NCTC 12129 19.5 [16.4 - 23.1] 21.1 [18.8 - 23.5] 18.9 [16.3 - 22.0] 3.41
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella enterica subsp. arizonae NCTC 8297 19.7 [16.6 - 23.3] 21.1 [18.8 - 23.5] 19.1 [16.4 - 22.1] 2.56
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter muytjensii ATCC 51329 19.2 [16.0 - 22.8] 21.1 [18.9 - 23.6] 18.7 [16.0 - 21.7] 7.78
'Escherichia coli UMN026' (CU928163) Escherichia hermannii NCTC 12129 20.6 [17.4 - 24.2] 21.1 [18.9 - 23.6] 19.8 [17.1 - 22.8] 3.36
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter muytjensii ATCC 51329 19.5 [16.4 - 23.1] 21.1 [18.9 - 23.5] 18.9 [16.2 - 22.0] 7.16
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia albertii NBRC 107761 17.1 [14.1 - 20.6] 21.0 [18.7 - 23.4] 16.9 [14.3 - 19.9] 6.72
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter condimenti 1330 18.7 [15.6 - 22.3] 21.0 [18.8 - 23.5] 18.3 [15.6 - 21.3] 5.28
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Pseudocitrobacter faecalis DSM 27453 20.6 [17.4 - 24.2] 21.0 [18.7 - 23.4] 19.8 [17.1 - 22.8] 1.06
'Escherichia sp. TW09308' (AEME00000000) Cronobacter muytjensii ATCC 51329 18.9 [15.8 - 22.5] 21.0 [18.7 - 23.4] 18.4 [15.8 - 21.4] 7.44
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.6 [16.5 - 23.2] 21.0 [18.8 - 23.4] 19.0 [16.3 - 22.0] 3.68
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia hermannii NCTC 12129 18.8 [15.7 - 22.4] 21.0 [18.8 - 23.4] 18.3 [15.7 - 21.3] 3.5
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter condimenti 1330 18.5 [15.4 - 22.0] 21.0 [18.7 - 23.4] 18.1 [15.4 - 21.1] 5.1
'Escherichia coli SMS-3-5' (CP000970) Cronobacter condimenti 1330 19.5 [16.4 - 23.1] 21.0 [18.8 - 23.5] 18.9 [16.2 - 21.9] 5.27
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter condimenti 1330 18.9 [15.7 - 22.5] 21.0 [18.7 - 23.4] 18.4 [15.7 - 21.4] 5.89
'Escherichia sp. TW09308' (AEME00000000) Escherichia hermannii NCTC 12129 19.7 [16.5 - 23.3] 21.0 [18.7 - 23.4] 19.1 [16.4 - 22.1] 3.8
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Enterobacter cloacae ATCC 13047 18.7 [15.5 - 22.2] 21.0 [18.8 - 23.5] 18.2 [15.6 - 21.2] 1.92
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.4 [16.3 - 23.0] 21.0 [18.7 - 23.4] 18.8 [16.2 - 21.9] 3.41
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia coli DSM 30083 20.1 [16.9 - 23.7] 21.0 [18.8 - 23.5] 19.4 [16.7 - 22.4] 3.43
'Escherichia coli S88' (CU928161) Cronobacter condimenti 1330 19.4 [16.3 - 23.0] 21.0 [18.7 - 23.4] 18.9 [16.2 - 21.9] 5.09
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter malonaticus LMG 23826 19.8 [16.7 - 23.4] 21.0 [18.8 - 23.4] 19.2 [16.5 - 22.2] 0.34
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli S88' (CU928161) 20.1 [16.9 - 23.7] 21.0 [18.8 - 23.5] 19.4 [16.7 - 22.4] 3.4
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia marmotae HT073016 19.4 [16.2 - 23.0] 21.0 [18.8 - 23.4] 18.8 [16.1 - 21.9] 3.76
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.2 [16.1 - 22.8] 21.0 [18.8 - 23.5] 18.7 [16.0 - 21.7] 3.7
'Escherichia coli IAI39' (CU928164) Cronobacter condimenti 1330 19.3 [16.1 - 22.9] 21.0 [18.8 - 23.4] 18.7 [16.1 - 21.8] 5.14
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter condimenti 1330 18.5 [15.4 - 22.1] 21.0 [18.8 - 23.5] 18.1 [15.5 - 21.1] 5.4
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella flexneri ATCC 29903 20.3 [17.1 - 23.9] 20.9 [18.7 - 23.4] 19.5 [16.8 - 22.6] 3.41
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella bongori NCTC 12419 19.9 [16.7 - 23.5] 20.9 [18.7 - 23.4] 19.2 [16.5 - 22.3] 2.75
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shimwellia blattae DSM 4481 17.1 [14.1 - 20.6] 20.9 [18.7 - 23.3] 16.9 [14.3 - 19.9] 5.93
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Kosakonia oryzendophytica REICA 082 21.3 [18.1 - 24.9] 20.9 [18.7 - 23.3] 20.3 [17.6 - 23.4] 0.35
'Escherichia coli UMN026' (CU928163) Cronobacter condimenti 1330 19.3 [16.2 - 22.9] 20.9 [18.7 - 23.4] 18.7 [16.1 - 21.8] 5.05
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter condimenti 1330 19.5 [16.3 - 23.1] 20.9 [18.7 - 23.3] 18.9 [16.2 - 21.9] 5.2
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter condimenti 1330 19.3 [16.2 - 22.9] 20.9 [18.7 - 23.3] 18.8 [16.1 - 21.8] 5.83
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter muytjensii ATCC 51329 19.3 [16.2 - 22.9] 20.9 [18.7 - 23.3] 18.8 [16.1 - 21.8] 1.21
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter condimenti 1330 19.0 [15.8 - 22.5] 20.9 [18.7 - 23.4] 18.5 [15.8 - 21.5] 5.02
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia hermannii NCTC 12129 20.8 [17.6 - 24.4] 20.9 [18.7 - 23.4] 19.9 [17.2 - 23.0] 3.5
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Citrobacter amalonaticus NCTC 10805 22.5 [19.2 - 26.1] 20.9 [18.7 - 23.4] 21.3 [18.5 - 24.3] 0.65
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia hermannii NCTC 12129 20.2 [17.0 - 23.8] 20.9 [18.7 - 23.4] 19.4 [16.7 - 22.5] 3.32
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.1 [14.1 - 20.6] 20.9 [18.7 - 23.3] 16.9 [14.3 - 19.9] 5.93
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Kosakonia sacchari SP1 22.5 [19.2 - 26.1] 20.8 [18.6 - 23.2] 21.3 [18.5 - 24.3] 0.19
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli SMS-3-5' (CP000970) 20.7 [17.5 - 24.3] 20.8 [18.6 - 23.2] 19.8 [17.1 - 22.9] 3.58
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli str. 'clone D i14'' (CP002212) 20.2 [17.0 - 23.8] 20.8 [18.6 - 23.3] 19.4 [16.7 - 22.4] 3.52
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Shigella dysenteriae Sd197' (CP000034) 20.3 [17.1 - 23.9] 20.8 [18.6 - 23.2] 19.5 [16.8 - 22.6] 2.83
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 18.8 [15.7 - 22.4] 20.8 [18.5 - 23.2] 18.3 [15.6 - 21.3] 3.5
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli UMN026' (CU928163) 20.4 [17.2 - 24.0] 20.8 [18.6 - 23.3] 19.6 [16.9 - 22.7] 3.36
'Escherichia fergusonii ECD227' (CM001142) Cronobacter condimenti 1330 19.3 [16.1 - 22.9] 20.8 [18.6 - 23.2] 18.7 [16.0 - 21.7] 5.76
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 20.7 [17.5 - 24.3] 20.8 [18.5 - 23.2] 19.9 [17.1 - 22.9] 3.5
'Escherichia sp. TW09308' (AEME00000000) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.6 [16.4 - 23.2] 20.8 [18.6 - 23.2] 19.0 [16.3 - 22.0] 3.8
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli IAI39' (CU928164) 20.1 [16.9 - 23.7] 20.8 [18.6 - 23.3] 19.4 [16.7 - 22.4] 3.45
'Escherichia sp. TW09308' (AEME00000000) Cronobacter condimenti 1330 18.6 [15.5 - 22.2] 20.8 [18.6 - 23.2] 18.1 [15.5 - 21.1] 5.49
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli str. 'clone D i2'' (CP002211) 20.2 [17.0 - 23.8] 20.8 [18.6 - 23.3] 19.4 [16.7 - 22.4] 3.52
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 21.5 [18.2 - 25.1] 20.8 [18.6 - 23.3] 20.5 [17.7 - 23.5] 3.28
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella dysenteriae ATCC 13313 20.0 [16.9 - 23.7] 20.8 [18.6 - 23.2] 19.3 [16.6 - 22.4] 3.1
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia fergusonii ATCC 35469' (CU928158) 20.9 [17.6 - 24.5] 20.7 [18.5 - 23.2] 20.0 [17.2 - 23.0] 4.14
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 20.2 [17.0 - 23.8] 20.7 [18.5 - 23.2] 19.4 [16.7 - 22.4] 3.54
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 18.4 [15.3 - 21.9] 20.7 [18.4 - 23.1] 18.0 [15.3 - 21.0] 2.43
'Escherichia sp. TW09308' (AEME00000000) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.0 [14.0 - 20.5] 20.7 [18.5 - 23.2] 16.8 [14.3 - 19.8] 6.23
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shimwellia blattae DSM 4481 18.4 [15.3 - 21.9] 20.7 [18.4 - 23.1] 18.0 [15.3 - 21.0] 2.43
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 20.1 [16.9 - 23.7] 20.7 [18.5 - 23.2] 19.4 [16.7 - 22.4] 3.33
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia fergusonii ATCC 35469 20.8 [17.6 - 24.4] 20.7 [18.5 - 23.2] 19.9 [17.2 - 23.0] 4.16
'Escherichia fergusonii ECD227' (CM001142) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.5 [14.4 - 21.0] 20.7 [18.4 - 23.1] 17.2 [14.6 - 20.2] 6.5
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia marmotae HT073016 17.2 [14.2 - 20.7] 20.7 [18.4 - 23.1] 17.0 [14.4 - 20.0] 6.2
'Escherichia sp. TW09308' (AEME00000000) Shimwellia blattae DSM 4481 17.0 [14.0 - 20.5] 20.7 [18.5 - 23.2] 16.8 [14.3 - 19.8] 6.23
'Escherichia fergusonii ECD227' (CM001142) Escherichia hermannii NCTC 12129 21.0 [17.8 - 24.6] 20.7 [18.5 - 23.2] 20.1 [17.3 - 23.1] 4.07
'Escherichia fergusonii ECD227' (CM001142) Shimwellia blattae DSM 4481 17.5 [14.4 - 21.0] 20.7 [18.4 - 23.1] 17.2 [14.6 - 20.2] 6.5
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia fergusonii ECD227' (CM001142) 20.9 [17.7 - 24.5] 20.6 [18.4 - 23.0] 20.0 [17.2 - 23.0] 4.07
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Pseudocitrobacter faecalis DSM 27453 17.9 [14.8 - 21.4] 20.6 [18.4 - 23.0] 17.5 [14.9 - 20.5] 3.49
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Kosakonia sacchari SP1 18.4 [15.3 - 22.0] 20.5 [18.2 - 22.9] 18.0 [15.3 - 21.0] 2.24
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter condimenti 1330 18.7 [15.6 - 22.3] 20.5 [18.3 - 22.9] 18.2 [15.6 - 21.2] 0.74
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Kosakonia oryzendophytica REICA 082 18.7 [15.6 - 22.3] 20.2 [18.0 - 22.6] 18.2 [15.5 - 21.2] 2.78
Table 4: Strains in your dataset

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TYGS ID Kind Species cluster Subspecies cluster Preferred name Deposit Authority Other deposits Synonymous taxon names Base pairs Percent G+C No. proteins Goldstamp Bioproject accession Biosample accession Assembly accession IMG OID BacDive
TYGS ID Kind Species cluster Subspecies cluster Preferred name Deposit Authority Other deposits Synonymous taxon names Base pairs Percent G+C No. proteins Goldstamp Bioproject accession Biosample accession Assembly accession IMG OID BacDive
11556 type strain 1 2 Citrobacter koseri NCTC 10786 Frederiksen 1970 CIP 105014; CIP 82.87; ATCC 27028; CCUG 4859; DSM 4570; DSM 4595; JCM 1658; LMG 5519 Citrobacter koseri 4,661,458 53.81 6398 PRJEB6403 SAMEA2665132 GCA_900446925 strain page
11560 type strain 2 0 Citrobacter amalonaticus NCTC 10805 (Young et al. 1971) Brenner and Farmer 1982 9823; CIP 82.89; ATCC 25405; CCUG 4860 A; CCUG 4860; CECT 863; DSM 4593; JCM 1661; LMG 7873 Citrobacter amalonaticus; Levinea amalonatica 5,093,340 53.43 5330 PRJEB6403 SAMEA2612491 GCA_900460855 strain page
11561 type strain 1 2 Levinea malonatica NCTC 10810 Young et al. 1971 ATCC 25408; DSM 4596; JCM 1660 Levinea malonatica 4,732,730 53.78 5321 PRJEB6403 SAMEA2665133 GCA_900461075 species page
12732 type strain 3 15 Escherichia hermannii NCTC 12129 Brenner et al. 1983 LMG 7867; CCUG 15714; DSM 4560; ATCC 33650; JCM 1473; CDC 980-72; CIP 103176; CIP 104946; HAMBI 1693 Escherichia hermannii 4,553,773 54.08 4875 PRJNA224116 SAMEA2612498 GCF_900635495 species page
12755 type strain 4 20 Escherichia albertii NBRC 107761 Huys et al. 2003 Albert 19982; CCUG 46494; DSM 17582; LMG 20976 Escherichia albertii 4,416,104 49.79 4285 Gp0016729 PRJDB13 SAMD00019863 GCA_000759775 strain page
15030 type strain 5 1 Kosakonia sacchari SP1 (Zhu et al. 2013) Gu et al. 2014 CGMCC 1.12102; DSM 100203; LMG 26783; SP 1 Enterobacter sacchari; Kosakonia sacchari 5,530,608 54.27 5194 Gp0106921 PRJEB16854 SAMN04487787 GCA_900109485 strain page
1676 type strain 6 18 Escherichia coli DSM 30083 (Migula 1895) Castellani and Chalmers 1919 CIP 54.8; NCCB 54008; ATCC 11775; CCUG 24; CCUG 29300; JCM 1649; NBIMCC 3398; NBRC 102203; NCTC 9001; LMG 2092 Bacillus coli; Escherichia coli 5,037,933 50.64 4762 Gp0007996 PRJNA50621 SAMN00718807 GCA_000690815 2528311135 species page
17920 type strain 1 2 Citrobacter diversus NCTC 10849 (Burkey 1928) Werkman and Gillen 1932 ATCC 27156; JCM 1659; CDC 3613-63; LMG 5741 Aerobacter diversum; Citrobacter diversus 4,915,694 53.59 4814 PRJEB6403 SAMEA2580312 GCA_900706735 species page
19333 type strain 7 3 Salmonella enterica subsp. arizonae NCTC 8297 (Borman 1957) Le Minor and Popoff 1987 CIP 82.30; ATCC 13314; CCUG 6322; DSM 9386 Paracolobactrum arizonae; Salmonella arizonae; Salmonella choleraesuis subsp. arizonae; Salmonella enterica subsp. arizonae 4,545,679 51.52 5747 PRJEB6403 SAMEA2665124 GCA_900456225 strain page
19551 type strain 8 12 Salmonella typhi NCTC 8385 (Schroeter 1886) Warren and Scott 1930 ATCC 19430; CUETM 79-394; HAMBI 1306 Bacillus typhi; Salmonella typhi 4,832,830 52.09 4632 Gp0342001 PRJEB6403 SAMEA104281633 GCA_900456745 species page
20292 type strain 6 19 Shigella flexneri ATCC 29903 Castellani and Chalmers 1919 CIP 82.48; DSM 4782 Shigella flexneri 4,938,295 50.67 5112 Gp0307840 PRJNA218110 SAMN08330274 GCA_002950215 species page
20293 type strain 6 19 Shigella boydii ATCC 8700 Ewing 1949 CIP 82.50; CCUG 49022; DSM 7532; NCTC 12985; P288 Shigella boydii 4,525,323 51.12 4913 Gp0307838 PRJNA218110 SAMN08330244 GCA_002946735 strain page
20376 type strain 9 4 Pseudocitrobacter faecalis DSM 27453 Kämpfer et al. 2014 emend. Kämpfer et al. 2020 25 CIT; CCM 8479; LMG 27751 Pseudocitrobacter faecalis 5,155,180 53.02 4895 Gp0290553 PRJNA463351 SAMN09074683 GCA_003315335 2770939623 strain page
23825 type strain 8 12 Salmonella choleraesuis DSM 14846 (Smith 1894) Weldin 1927 CIP 55.133; ATCC 13312; JCM 1651; NCTC 5735; F. Kauffmann 1348 Bacillus choleraesuis; Salmonella choleraesuis; Salmonella choleraesuis subsp. choleraesuis 4,679,634 52.14 4514 Gp0251884 PRJNA439983 SAMN08769612 GCA_003201315 2756170275 species page
3094 type strain 10 5 Cronobacter condimenti 1330 Joseph et al. 2012 CECT 7863; LMG 26250 Cronobacter condimenti 4,480,460 55.77 4272 Gp0023163 PRJEB164 SAMEA2272515 GCA_000319285 2534681767 strain page
3845 type strain 11 6 Skermanella stibiiresistens SB22 Luo et al. 2012 emend. Hördt et al. 2020 CGMCC 1.10751; KCTC 23364 Skermanella stibiiresistens 7,868,338 65.86 7269 Gp0048174 PRJNA214805 SAMN02951888 GCA_000576635 strain page
3932 type strain 12 7 Kosakonia oryzendophytica REICA_082 (Hardoim et al. 2015) Li et al. 2016 NCCB 100390; LMG 26432 Enterobacter oryzendophyticus; Kosakonia oryzendophytica 4,837,282 53.73 4486 Gp0108252 PRJEB15027 SAMN04487791 GCA_900094925 strain page
4441 type strain 13 8 Cronobacter malonaticus LMG 23826 Iversen et al. 2008 DSM 18702; CDC 1058-77; E825 Cronobacter malonaticus; Cronobacter sakazakii subsp. malonaticus 4,434,037 56.84 4130 Gp0020487 PRJNA89099 SAMN02952929 GCA_000409305 2548876974 strain page
4446 type strain 14 9 Cronobacter muytjensii ATCC 51329 Iversen et al. 2008 CIP 103581; DSM 21870 Cronobacter muytjensii 4,322,611 57.72 3916 Gp0020623 PRJNA89111 SAMN02952928 GCA_000409285 2548876993 strain page
4824 type strain 15 14 Escherichia marmotae HT073016 Liu et al. 2015 CGMCC 1.12862; DSM 28771 Escherichia marmotae 4,493,998 50.31 4255 Gp0117761 PRJNA247449 SAMN02777259 GCA_000807695 strain page
5096 type strain 16 10 Cronobacter sakazakii NBRC 102416 (Farmer et al. 1980) Iversen et al. 2008 CIP 103183; ATCC 29544; CCUG 14558; DSM 4485; JCM 1233; NBIMCC 8667; NCTC 11467; CDC 4562-70; CDC 4562-70 (78-067947); LMG 5740 Cronobacter sakazakii; Cronobacter sakazakii subsp. sakazakii; Enterobacter sakazakii 4,548,307 56.72 4241 Gp0024044 PRJDB277 SAMD00000350 GCA_000684935 2576861057 strain page
573 type strain 17 11 Enterobacter cloacae ATCC 13047 (Jordan 1890) Hormaeche and Edwards 1960 CIP 60.85; CCUG 28448; CCUG 29301; CCUG 6323; DSM 30054; JCM 1232; NBIMCC 8570; IFO 13535; NBRC 13535; NCTC 10005; HAMBI 1295; HAMBI 96; LMG 2783 Bacillus cloacae; Bacterium cloacae; Cloaca cloacae; Enterobacter cloacae; Enterobacter cloacae subsp. cloacae 5,598,795 54.58 5518 Gp0006802 PRJNA45793 SAMN02603901 GCA_000025565 646564529 strain page
575 type strain 18 16 Shimwellia blattae DSM 4481 (Burgess et al. 1973) Priest and Barker 2010 CIP 103175; CIP 104942; ATCC 29907; JCM 1650; NCTC 12127; CDC 9005-74; HAMBI 1692; LMG 3030 Escherichia blattae; Shimwellia blattae 4,158,725 56.51 3904 Gp0001398 PRJNA36307 SAMN02603253 GCA_000262305 2513020017 strain page
576 type strain 19 17 Escherichia fergusonii ATCC 35469 Farmer et al. 1985 CIP 103357; CIP 104947; DSM 13698; JCM 21226; NBRC 102419; NCTC 12128; CDC 568-73; LMG 7866 Escherichia fergusonii 4,643,861 49.92 4324 Gp0001407 PRJNA33369 SAMEA3138228 GCA_000026225 643692022 strain page
578 type strain 8 12 Salmonella enterica LT2 (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 CIP 60.62; NCIMB 11450; ATCC 43971; CCUG 42060; DSM 17058; DSM 27656; IFO 13245; NBRC 13245; NCTC 12416; NCIB 11450 Salmonella enterica; Salmonella enterica subsp. enterica 4,951,371 52.24 4554 Gp0000715 PRJNA241 SAMN02604315 GCA_000006945 637000255 strain page
6095 type strain 8 12 Salmonella typhimurium ATCC 13311 (Loeffler 1892) Castellani and Chalmers 1919 CIP 58.58; ATCC 13311; JCM 1652; NCTC 74 Bacillus typhimurium; Salmonella typhimurium 4,831,756 52.11 4361 Gp0103826 PRJNA256479 SAMN02943517 GCA_000743055 species page
6120 type strain 8 12 Salmonella typhimurium JCM 1652 (Loeffler 1892) Castellani and Chalmers 1919 CIP 58.58; ATCC 13311; JCM 1652; NCTC 74 Bacillus typhimurium; Salmonella typhimurium 4,747,271 52.06 5270 Gp0092156 PRJDB611 SAMD00009942 GCA_000614485 species page
6303 type strain 6 19 Shigella sonnei ATCC 29930 (Levine 1920) Weldin 1927 CIP 82.49; CECT 4887; DSM 5570; NCTC 12984 Bacterium sonnei; Shigella sonnei 4,994,001 51.01 5043 Gp0307839 PRJNA218110 SAMN08330284 GCA_002950395 strain page
6328 type strain 6 19 Shigella dysenteriae ATCC 13313 (Shiga 1897) Castellani and Chalmers 1919 CIP 57.28; DSM 4781; NCTC 4837 Bacillus dysentericus; Shigella dysenteriae 4,578,459 50.98 5232 Gp0309783 PRJNA218110 SAMN08330256 GCA_002949675 strain page
810 type strain 20 13 Salmonella bongori NCTC 12419 (Le Minor et al. 1985) Reeves et al. 1989 CIP 82.33; ATCC 43975; CCUG 30042; DSM 13772 Salmonella bongori; Salmonella choleraesuis subsp. bongori; Salmonella enterica subsp. bongori 4,460,105 51.33 3864 Gp0001845 PRJNA351 SAMEA3138409 GCA_000252995 650716084 strain page
U10000 user strain 6 21 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 5,282,923 50.39 5267
U10001 user strain 6 18 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 5,042,708 50.49 4768
U10002 user strain 15 14 'Escherichia sp. TW09308' (AEME00000000) 4,809,826 50.28 4639
U10003 user strain 6 19 'Escherichia coli str. K-12 substr. W3110' (AP009048) 4,646,332 50.8 4327
U10004 user strain 6 19 'Escherichia coli O157:H7 str. Sakai' (BA000007) 5,498,578 50.54 5299
U10005 user strain 3 15 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 4,495,280 54.08 4168
U10006 user strain 19 17 'Escherichia fergusonii ECD227' (CM001142) 4,509,864 50.01 4237
U10007 user strain 6 19 'Shigella dysenteriae Sd197' (CP000034) 4,369,232 51.25 4977
U10008 user strain 6 21 'Escherichia coli SMS-3-5' (CP000970) 5,068,389 50.5 4651
U10009 user strain 18 16 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 4,158,725 56.51 3825
U10010 user strain 6 18 'Escherichia coli str. 'clone D i2'' (CP002211) 5,038,386 50.56 4609
U10011 user strain 6 18 'Escherichia coli str. 'clone D i14'' (CP002212) 5,038,386 50.56 4609
U10012 user strain 19 17 'Escherichia fergusonii ATCC 35469' (CU928158) 4,588,711 49.94 4262
U10013 user strain 6 18 'Escherichia coli S88' (CU928161) 5,032,268 50.68 4747
U10014 user strain 6 21 'Escherichia coli UMN026' (CU928163) 5,202,090 50.72 4825
U10015 user strain 6 21 'Escherichia coli IAI39' (CU928164) 5,132,068 50.63 4863
U9994 user strain 6 19 'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 5,677,181 50.58 5721
U9995 user strain 4 20 'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 4,698,533 49.88 4870
U9996 user strain 6 21 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 4,829,725 50.58 4603
U9997 user strain 6 21 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 5,248,906 50.75 5102
U9998 user strain 6 21 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 5,236,490 50.67 5113
U9999 user strain 6 21 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 5,207,549 50.38 4952
Methods, Results and References

Materials and Methods

The genome sequence data were uploaded to the Type (Strain) Genome Server (TYGS), a free bioinformatics platform available under https://tygs.dsmz.de, for a whole genome-based taxonomic analysis [1]. The analysis also made use of recently introduced methodological updates and features [2]. Information on nomenclature, synonymy and associated taxonomic literature was provided by TYGS's sister database, the List of Prokaryotic names with Standing in Nomenclature (LPSN, available at https://lpsn.dsmz.de) [2]. The results were provided by the TYGS on 2019-10-02. The TYGS analysis was subdivided into the following steps:

Determination of closely related type strains

Determination of closest type strain genomes was done in two complementary ways: First, all user genomes were compared against all type strain genomes available in the TYGS database via the MASH algorithm, a fast approximation of intergenomic relatedness [3], and, the ten type strains with the smallest MASH distances chosen per user genome. Second, an additional set of ten closely related type strains was determined via the 16S rDNA gene sequences. These were extracted from the user genomes using RNAmmer [4] and each sequence was subsequently BLASTed [5] against the 16S rDNA gene sequence of each of the currently 21614 type strains available in the TYGS database. This was used as a proxy to find the best 50 matching type strains (according to the bitscore) for each user genome and to subsequently calculate precise distances using the Genome BLAST Distance Phylogeny approach (GBDP) under the algorithm 'coverage' and distance formula d5 [6]. These distances were finally used to determine the 10 closest type strain genomes for each of the user genomes.

Pairwise comparison of genome sequences

For the phylogenomic inference, all pairwise comparisons among the set of genomes were conducted using GBDP and accurate intergenomic distances inferred under the algorithm 'trimming' and distance formula d5 [6]. 100 distance replicates were calculated each. Digital DDH values and confidence intervals were calculated using the recommended settings of the GGDC 4.0 [2,6].

Phylogenetic inference

The resulting intergenomic distances were used to infer a balanced minimum evolution tree with branch support via FASTME 2.1.6.1 including SPR postprocessing [7]. Branch support was inferred from 100 pseudo-bootstrap replicates each. The trees were rooted at the midpoint [8] and visualized with PhyD3 [9].

Type-based species and subspecies clustering

The type-based species clustering using a 70% dDDH radius around each of the 30 type strains was done as previously described [1]. The resulting groups are shown in Table 1 and 4. Subspecies clustering was done using a 79% dDDH threshold as previously introduced [10].

Results

Type-based species and subspecies clustering

The resulting species and subspecies clusters are listed in Table 4, whereas the taxonomic identification of the query strains is found in Table 1. Briefly, the clustering yielded 20 species clusters and the provided query strains were assigned to 6 of these. Moreover, user strains were located in 8 of 22 subspecies clusters.

Figure caption SSU tree

Figure 1. Tree inferred with FastME 2.1.6.1 [7] from GBDP distances calculated from 16S rDNA gene sequences. The branch lengths are scaled in terms of GBDP distance formula d5. The numbers above branches are GBDP pseudo-bootstrap support values > 60 % from 100 replications, with an average branch support of 62.6 %. The tree was rooted at the midpoint [8].

Figure caption genome tree

Figure 2. Tree inferred with FastME 2.1.6.1 [7] from GBDP distances calculated from genome sequences. The branch lengths are scaled in terms of GBDP distance formula d5. The numbers above branches are GBDP pseudo-bootstrap support values > 60 % from 100 replications, with an average branch support of 66.4 %. The tree was rooted at the midpoint [8].

References

[1] Meier-Kolthoff JP, Göker M. TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nat. Commun. 2019;10: 2182. DOI: 10.1038/s41467-019-10210-3

[2] Meier-Kolthoff JP, Sardà Carbasse J, Peinado-Olarte RL, Göker M. TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes. Nucleic Acid Res. 2022;50: D801–D807. DOI: 10.1093/nar/gkab902

[3] Ondov BD, Treangen TJ, Melsted P, et al. Mash: Fast genome and metagenome distance estimation using MinHash. Genome Biol 2016;17: 1–14. DOI: 10.1186/s13059-016-0997-x

[4] Lagesen K, Hallin P. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. Oxford Univ Press; 2007;35: 3100–3108. DOI: 10.1093/nar/gkm160

[5] Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, et al. BLAST+: architecture and applications. BMC Bioinformatics. 2009;10: 421. DOI: 10.1186/1471-2105-10-421

[6] Meier-Kolthoff JP, Auch AF, Klenk H-P, Göker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics. 2013;14: 60. DOI: 10.1186/1471-2105-14-60

[7] Lefort V, Desper R, Gascuel O. FastME 2.0: A comprehensive, accurate, and fast distance-based phylogeny inference program. Mol Biol Evol. 2015;32: 2798–2800. DOI: 10.1093/molbev/msv150

[8] Farris JS. Estimating phylogenetic trees from distance matrices. Am Nat. 1972;106: 645–667.

[9] Kreft L, Botzki A, Coppens F, Vandepoele K, Van Bel M. PhyD3: A phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization. Bioinformatics. 2017;33: 2946–2947. DOI: 10.1093/bioinformatics/btx324

[10] Meier-Kolthoff JP, Hahnke RL, Petersen J, Scheuner C, Michael V, Fiebig A, et al. Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy. Stand Genomic Sci. 2014;9: 2. DOI: 10.1186/1944-3277-9-2