Identification Trees Pairwise comparisons Strains in your dataset Methods

Table 1: Phylogenies
Figure View tree No. strains Average branch support δ statistics Download tree
Figure 1: GBDP tree (whole-genome sequence-based) 51 84.5 % 0.133
Figure 2: GBDP tree (16S rDNA gene sequence-based) 50 61.7 % 0.292
Table 2: Identification
  • Your strain 'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli H299' (ADBC01000001-ADBC01000229) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli str. K-12 substr. W3110' (AP009048) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli O157:H7 str. Sakai' (BA000007) belongs to species Escherichia coli.
  • Your strain 'Shigella dysenteriae Sd197' (CP000034) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli SMS-3-5' (CP000970) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli str. 'clone D i2'' (CP002211) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli str. 'clone D i14'' (CP002212) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli S88' (CU928161) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli UMN026' (CU928163) belongs to species Escherichia coli.
  • Your strain 'Escherichia coli IAI39' (CU928164) belongs to species Escherichia coli.
  • Your strain 'Escherichia sp. TW09308' (AEME00000000) belongs to species Escherichia marmotae.
  • Your strain 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) belongs to species Shimwellia blattae.
  • Your strain 'Escherichia fergusonii ECD227' (CM001142) belongs to species Escherichia fergusonii.
  • Your strain 'Escherichia fergusonii ATCC 35469' (CU928158) belongs to species Escherichia fergusonii.
  • Potential new species detected: your strain 'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) does not belong to any species found in TYGS database.
  • Potential new species detected: your strain 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) does not belong to any species found in TYGS database.

OverallRegarding your genomes
Table 3: Pairwise comparisons of user genomes vs. type strain genomes

Your genomes are printed in bold-face and the table is ordered by column dDDH (d4) in descending order. Hold SHIFT key and click column headers if you want to order by multiple criteria.

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Query strain Subject strain dDDH (d0, in %) C.I. (d0, in %) dDDH (d4, in %) C.I. (d4, in %) dDDH (d6, in %) C.I. (d6, in %) G+C content difference (in %)
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shimwellia blattae DSM 4481 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 0.0
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli str. 'clone D i14'' (CP002212) 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 100.0 [100.0 - 100.0] 0.0
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia fergusonii ATCC 35469 99.9 [99.7 - 99.9] 99.7 [99.5 - 99.8] 99.9 [99.9 - 100.0] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 98.6 [97.5 - 99.2] 99.6 [99.3 - 99.7] 99.3 [98.8 - 99.6] 0.04
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli UMN026' (CU928163) 95.4 [93.2 - 96.9] 99.3 [98.9 - 99.5] 97.5 [96.2 - 98.3] 0.05
'Escherichia coli S88' (CU928161) Escherichia coli DSM 30083 98.6 [97.5 - 99.2] 99.2 [98.7 - 99.5] 99.3 [98.8 - 99.6] 0.04
'Shigella dysenteriae Sd197' (CP000034) Shigella dysenteriae ATCC 13313 98.8 [97.8 - 99.3] 98.9 [98.4 - 99.3] 99.4 [98.9 - 99.6] 0.27
'Escherichia sp. TW09308' (AEME00000000) Escherichia marmotae HT073016 81.2 [77.3 - 84.6] 94.2 [92.5 - 95.6] 86.3 [83.2 - 88.9] 0.04
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli str. 'clone D i14'' (CP002212) 91.4 [88.4 - 93.7] 91.3 [89.2 - 93.1] 93.8 [91.6 - 95.4] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli str. 'clone D i2'' (CP002211) 91.4 [88.4 - 93.7] 91.3 [89.2 - 93.1] 93.8 [91.6 - 95.4] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia coli DSM 30083 85.6 [81.9 - 88.7] 90.3 [88.0 - 92.2] 89.2 [86.4 - 91.5] 0.16
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli S88' (CU928161) 85.8 [82.2 - 88.8] 90.3 [88.0 - 92.1] 89.4 [86.6 - 91.7] 0.19
'Escherichia fergusonii ECD227' (CM001142) Escherichia fergusonii ATCC 35469 92.8 [90.0 - 94.8] 90.1 [87.8 - 92.0] 94.6 [92.6 - 96.1] 0.09
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia fergusonii ATCC 35469' (CU928158) 93.7 [91.1 - 95.6] 90.1 [87.8 - 92.0] 95.3 [93.4 - 96.6] 0.07
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia coli DSM 30083 87.0 [83.4 - 89.9] 90.0 [87.7 - 91.9] 90.2 [87.5 - 92.4] 0.08
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia coli DSM 30083 87.0 [83.4 - 89.9] 90.0 [87.7 - 91.9] 90.2 [87.5 - 92.4] 0.08
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia coli S88' (CU928161) 86.5 [82.9 - 89.4] 89.8 [87.4 - 91.7] 89.8 [87.0 - 92.0] 0.12
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli S88' (CU928161) 86.5 [82.9 - 89.4] 89.8 [87.4 - 91.7] 89.8 [87.0 - 92.0] 0.12
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli UMN026' (CU928163) 88.2 [84.8 - 91.0] 89.1 [86.7 - 91.1] 91.1 [88.5 - 93.1] 0.14
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 83.5 [79.7 - 86.7] 88.6 [86.2 - 90.7] 87.3 [84.2 - 89.8] 0.09
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli IAI39' (CU928164) 79.3 [75.3 - 82.7] 87.0 [84.4 - 89.2] 83.5 [80.2 - 86.3] 0.24
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella sonnei ATCC 29930 78.4 [74.4 - 81.9] 86.5 [83.9 - 88.8] 82.7 [79.4 - 85.6] 0.21
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella boydii ATCC 8700 74.8 [70.8 - 78.4] 86.5 [83.9 - 88.8] 79.5 [76.1 - 82.6] 0.32
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli SMS-3-5' (CP000970) 78.9 [74.9 - 82.4] 86.4 [83.8 - 88.7] 83.1 [79.8 - 85.9] 0.1
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 84.5 [80.7 - 87.6] 85.4 [82.7 - 87.7] 87.6 [84.6 - 90.0] 0.2
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli IAI39' (CU928164) 83.1 [79.2 - 86.3] 85.1 [82.4 - 87.5] 86.3 [83.2 - 88.9] 0.13
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli UMN026' (CU928163) 84.1 [80.3 - 87.2] 85.0 [82.3 - 87.4] 87.2 [84.1 - 89.7] 0.34
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 82.2 [78.3 - 85.5] 85.0 [82.3 - 87.4] 85.6 [82.5 - 88.3] 0.29
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella flexneri ATCC 29903 73.4 [69.5 - 77.1] 84.9 [82.2 - 87.3] 78.1 [74.6 - 81.2] 0.13
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Shigella dysenteriae Sd197' (CP000034) 62.5 [58.7 - 66.0] 84.0 [81.2 - 86.4] 67.7 [64.3 - 70.9] 0.71
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella dysenteriae ATCC 13313 61.2 [57.5 - 64.8] 83.9 [81.1 - 86.3] 66.5 [63.1 - 69.7] 0.44
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Shigella dysenteriae Sd197' (CP000034) 57.4 [53.8 - 60.9] 83.4 [80.6 - 85.8] 62.6 [59.3 - 65.8] 0.67
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella dysenteriae ATCC 13313 56.9 [53.3 - 60.4] 83.1 [80.3 - 85.6] 62.1 [58.8 - 65.3] 0.41
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 72.7 [68.7 - 76.3] 83.0 [80.2 - 85.5] 77.1 [73.6 - 80.2] 0.26
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 65.9 [62.1 - 69.6] 82.7 [79.8 - 85.2] 70.8 [67.4 - 74.1] 0.22
'Shigella dysenteriae Sd197' (CP000034) Shigella sonnei ATCC 29930 69.4 [65.5 - 73.1] 82.6 [79.8 - 85.1] 74.1 [70.6 - 77.3] 0.24
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Shigella dysenteriae Sd197' (CP000034) 68.7 [64.9 - 72.4] 82.5 [79.7 - 85.1] 73.4 [70.0 - 76.6] 0.45
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shigella dysenteriae ATCC 13313 66.2 [62.4 - 69.9] 82.5 [79.7 - 85.0] 71.1 [67.6 - 74.3] 0.18
'Shigella dysenteriae Sd197' (CP000034) Shigella boydii ATCC 8700 70.7 [66.8 - 74.4] 81.0 [78.1 - 83.6] 75.0 [71.5 - 78.2] 0.13
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella boydii ATCC 8700 64.4 [60.6 - 68.0] 80.8 [77.9 - 83.4] 69.1 [65.6 - 72.3] 0.58
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella flexneri ATCC 29903 63.7 [59.9 - 67.3] 80.1 [77.2 - 82.8] 68.3 [64.9 - 71.5] 0.13
'Shigella dysenteriae Sd197' (CP000034) Shigella flexneri ATCC 29903 72.4 [68.4 - 76.0] 80.0 [77.1 - 82.7] 76.3 [72.9 - 79.5] 0.58
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 71.7 [67.8 - 75.4] 79.7 [76.8 - 82.4] 75.7 [72.2 - 78.8] 0.18
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli IAI39' (CU928164) 78.3 [74.4 - 81.8] 79.7 [76.7 - 82.3] 81.4 [78.1 - 84.4] 0.04
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella boydii ATCC 8700 60.3 [56.6 - 63.9] 79.6 [76.7 - 82.3] 65.0 [61.6 - 68.2] 0.54
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli SMS-3-5' (CP000970) 81.9 [78.0 - 85.2] 79.6 [76.7 - 82.3] 84.5 [81.2 - 87.2] 0.08
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli SMS-3-5' (CP000970) 81.6 [77.7 - 84.9] 79.5 [76.5 - 82.1] 84.2 [80.9 - 86.9] 0.12
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 71.9 [67.9 - 75.6] 79.5 [76.5 - 82.2] 75.8 [72.3 - 79.0] 0.38
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli str. 'clone D i2'' (CP002211) 79.1 [75.2 - 82.6] 79.5 [76.6 - 82.2] 82.1 [78.8 - 85.0] 0.19
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli str. 'clone D i14'' (CP002212) 79.1 [75.2 - 82.6] 79.5 [76.6 - 82.2] 82.1 [78.8 - 85.0] 0.19
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 75.0 [71.0 - 78.6] 79.4 [76.5 - 82.1] 78.5 [75.1 - 81.6] 0.18
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli IAI39' (CU928164) 80.3 [76.4 - 83.7] 79.4 [76.5 - 82.1] 83.1 [79.8 - 85.9] 0.26
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shigella sonnei ATCC 29930 70.3 [66.4 - 74.0] 79.4 [76.4 - 82.1] 74.4 [70.9 - 77.6] 0.48
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 76.4 [72.4 - 79.9] 79.4 [76.4 - 82.0] 79.7 [76.3 - 82.7] 0.02
'Escherichia coli UMN026' (CU928163) 'Escherichia coli IAI39' (CU928164) 79.5 [75.5 - 82.9] 79.3 [76.4 - 82.0] 82.4 [79.0 - 85.3] 0.09
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 76.6 [72.7 - 80.2] 79.3 [76.4 - 82.0] 79.9 [76.5 - 83.0] 0.13
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia coli DSM 30083 82.0 [78.1 - 85.3] 79.1 [76.2 - 81.8] 84.5 [81.2 - 87.2] 0.11
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 75.5 [71.5 - 79.1] 79.1 [76.1 - 81.8] 78.9 [75.5 - 82.0] 0.27
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli UMN026' (CU928163) 79.6 [75.6 - 83.1] 79.1 [76.2 - 81.8] 82.4 [79.1 - 85.3] 0.08
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli UMN026' (CU928163) 73.2 [69.3 - 76.9] 79.0 [76.0 - 81.7] 76.9 [73.4 - 80.0] 0.04
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella flexneri ATCC 29903 59.3 [55.6 - 62.8] 78.9 [76.0 - 81.6] 63.9 [60.5 - 67.1] 0.09
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli S88' (CU928161) 79.3 [75.4 - 82.8] 78.9 [76.0 - 81.6] 82.2 [78.8 - 85.1] 0.07
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 73.6 [69.6 - 77.2] 78.9 [76.0 - 81.6] 77.2 [73.7 - 80.3] 0.09
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli UMN026' (CU928163) 76.6 [72.6 - 80.1] 78.9 [75.9 - 81.6] 79.8 [76.4 - 82.8] 0.32
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli IAI39' (CU928164) 78.2 [74.2 - 81.7] 78.8 [75.8 - 81.4] 81.1 [77.8 - 84.1] 0.06
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 79.8 [75.8 - 83.2] 78.8 [75.9 - 81.5] 82.5 [79.2 - 85.4] 0.27
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 77.5 [73.5 - 81.1] 78.6 [75.7 - 81.3] 80.6 [77.2 - 83.6] 0.42
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shigella sonnei ATCC 29930 65.5 [61.7 - 69.1] 78.5 [75.6 - 81.2] 69.8 [66.3 - 73.0] 0.44
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia coli DSM 30083 72.9 [68.9 - 76.5] 78.5 [75.5 - 81.1] 76.5 [73.0 - 79.7] 0.25
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli IAI39' (CU928164) 72.5 [68.6 - 76.2] 78.4 [75.4 - 81.1] 76.2 [72.7 - 79.3] 0.12
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 71.1 [67.1 - 74.7] 78.4 [75.4 - 81.1] 74.8 [71.4 - 78.0] 0.09
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli SMS-3-5' (CP000970) 77.7 [73.7 - 81.2] 78.3 [75.3 - 81.0] 80.6 [77.2 - 83.6] 0.17
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli UMN026' (CU928163) 78.9 [74.9 - 82.4] 78.2 [75.3 - 80.9] 81.7 [78.3 - 84.6] 0.22
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 81.5 [77.6 - 84.9] 78.2 [75.3 - 80.9] 83.9 [80.6 - 86.7] 0.22
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella boydii ATCC 8700 65.5 [61.7 - 69.1] 78.2 [75.2 - 80.9] 69.7 [66.3 - 72.9] 0.45
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli SMS-3-5' (CP000970) 74.3 [70.3 - 77.9] 78.2 [75.3 - 80.9] 77.7 [74.2 - 80.8] 0.25
'Escherichia coli UMN026' (CU928163) Shigella boydii ATCC 8700 66.7 [62.8 - 70.3] 78.0 [75.0 - 80.7] 70.8 [67.3 - 74.0] 0.4
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli S88' (CU928161) 73.3 [69.4 - 77.0] 78.0 [75.0 - 80.7] 76.8 [73.3 - 79.9] 0.29
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 71.8 [67.8 - 75.4] 77.9 [74.9 - 80.6] 75.4 [71.9 - 78.6] 0.36
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli IAI39' (CU928164) 75.9 [71.9 - 79.4] 77.7 [74.7 - 80.4] 79.0 [75.5 - 82.0] 0.17
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli str. 'clone D i14'' (CP002212) 70.9 [67.0 - 74.6] 77.6 [74.7 - 80.4] 74.6 [71.1 - 77.8] 0.17
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia coli IAI39' (CU928164) 75.4 [71.5 - 79.0] 77.6 [74.6 - 80.3] 78.6 [75.1 - 81.7] 0.07
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella boydii ATCC 8700 65.0 [61.2 - 68.7] 77.6 [74.6 - 80.3] 69.2 [65.7 - 72.4] 0.54
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli IAI39' (CU928164) 75.4 [71.5 - 79.0] 77.6 [74.6 - 80.3] 78.6 [75.1 - 81.7] 0.07
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli IAI39' (CU928164) 73.9 [69.9 - 77.5] 77.6 [74.6 - 80.3] 77.2 [73.8 - 80.4] 0.14
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli str. 'clone D i2'' (CP002211) 70.9 [67.0 - 74.6] 77.6 [74.7 - 80.4] 74.6 [71.1 - 77.8] 0.17
'Escherichia coli UMN026' (CU928163) Shigella sonnei ATCC 29930 72.1 [68.2 - 75.8] 77.4 [74.4 - 80.1] 75.6 [72.2 - 78.8] 0.3
'Escherichia coli IAI39' (CU928164) Shigella sonnei ATCC 29930 70.0 [66.1 - 73.7] 77.3 [74.3 - 80.0] 73.7 [70.3 - 76.9] 0.38
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella flexneri ATCC 29903 64.8 [61.0 - 68.4] 77.3 [74.3 - 80.0] 68.9 [65.5 - 72.2] 0.09
'Escherichia coli UMN026' (CU928163) Shigella dysenteriae ATCC 13313 62.9 [59.1 - 66.5] 77.2 [74.2 - 79.9] 67.1 [63.7 - 70.3] 0.26
'Escherichia coli SMS-3-5' (CP000970) Escherichia coli DSM 30083 75.6 [71.6 - 79.2] 77.2 [74.2 - 79.9] 78.6 [75.2 - 81.7] 0.15
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 73.0 [69.1 - 76.7] 77.2 [74.2 - 80.0] 76.4 [72.9 - 79.6] 0.05
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli UMN026' (CU928163) 64.7 [60.9 - 68.3] 77.2 [74.2 - 79.9] 68.8 [65.4 - 72.0] 0.53
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella boydii ATCC 8700 62.5 [58.8 - 66.1] 77.1 [74.1 - 79.9] 66.8 [63.4 - 70.0] 0.74
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella sonnei ATCC 29930 68.7 [64.8 - 72.3] 77.1 [74.1 - 79.9] 72.5 [69.0 - 75.7] 0.64
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella flexneri ATCC 29903 65.7 [61.9 - 69.3] 77.1 [74.1 - 79.8] 69.7 [66.3 - 73.0] 0.0
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Shigella dysenteriae Sd197' (CP000034) 62.4 [58.7 - 66.0] 77.0 [74.0 - 79.7] 66.6 [63.2 - 69.8] 0.67
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella sonnei ATCC 29930 68.7 [64.8 - 72.4] 77.0 [74.0 - 79.7] 72.5 [69.0 - 75.7] 0.44
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shigella dysenteriae ATCC 13313 59.9 [56.2 - 63.4] 77.0 [74.0 - 79.8] 64.2 [60.8 - 67.4] 0.41
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 71.4 [67.4 - 75.0] 77.0 [74.0 - 79.7] 74.9 [71.4 - 78.1] 0.41
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli S88' (CU928161) 75.1 [71.1 - 78.7] 76.9 [73.9 - 79.7] 78.2 [74.7 - 81.3] 0.18
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli SMS-3-5' (CP000970) 79.1 [75.2 - 82.6] 76.9 [73.9 - 79.7] 81.6 [78.3 - 84.6] 0.3
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella sonnei ATCC 29930 69.1 [65.2 - 72.8] 76.9 [73.9 - 79.6] 72.8 [69.4 - 76.1] 0.26
'Escherichia coli S88' (CU928161) 'Escherichia coli IAI39' (CU928164) 77.6 [73.6 - 81.1] 76.9 [73.9 - 79.7] 80.3 [76.9 - 83.3] 0.05
'Escherichia coli SMS-3-5' (CP000970) Shigella sonnei ATCC 29930 70.6 [66.7 - 74.3] 76.9 [74.0 - 79.7] 74.2 [70.7 - 77.4] 0.52
'Escherichia coli IAI39' (CU928164) Escherichia coli DSM 30083 75.7 [71.7 - 79.3] 76.8 [73.8 - 79.6] 78.7 [75.2 - 81.8] 0.01
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Shigella dysenteriae Sd197' (CP000034) 60.4 [56.8 - 64.0] 76.8 [73.8 - 79.5] 64.7 [61.3 - 67.9] 0.5
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Shigella dysenteriae Sd197' (CP000034) 59.7 [56.1 - 63.3] 76.7 [73.7 - 79.4] 64.0 [60.6 - 67.2] 0.87
'Escherichia coli UMN026' (CU928163) Shigella flexneri ATCC 29903 67.7 [63.8 - 71.4] 76.7 [73.7 - 79.4] 71.5 [68.0 - 74.7] 0.05
'Escherichia coli IAI39' (CU928164) Shigella boydii ATCC 8700 68.3 [64.4 - 71.9] 76.7 [73.7 - 79.5] 72.0 [68.6 - 75.3] 0.49
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella flexneri ATCC 29903 64.3 [60.5 - 67.9] 76.6 [73.6 - 79.3] 68.3 [64.8 - 71.5] 0.29
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shigella dysenteriae ATCC 13313 58.0 [54.4 - 61.5] 76.6 [73.6 - 79.3] 62.3 [59.0 - 65.5] 0.61
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli SMS-3-5' (CP000970) 72.9 [68.9 - 76.5] 76.6 [73.6 - 79.3] 76.1 [72.7 - 79.3] 0.01
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella sonnei ATCC 29930 71.3 [67.4 - 75.0] 76.6 [73.6 - 79.3] 74.8 [71.3 - 77.9] 0.35
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella dysenteriae ATCC 13313 59.2 [55.6 - 62.8] 76.6 [73.6 - 79.3] 63.5 [60.1 - 66.7] 0.23
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Shigella dysenteriae Sd197' (CP000034) 62.1 [58.4 - 65.7] 76.4 [73.4 - 79.1] 66.2 [62.8 - 69.5] 0.58
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli str. 'clone D i2'' (CP002211) 75.3 [71.3 - 78.9] 76.3 [73.3 - 79.0] 78.2 [74.8 - 81.3] 0.06
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella sonnei ATCC 29930 63.4 [59.6 - 67.0] 76.3 [73.3 - 79.1] 67.4 [64.0 - 70.7] 0.62
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia coli str. 'clone D i14'' (CP002212) 75.3 [71.3 - 78.9] 76.3 [73.3 - 79.0] 78.2 [74.8 - 81.3] 0.06
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shigella dysenteriae ATCC 13313 61.0 [57.3 - 64.6] 76.3 [73.3 - 79.1] 65.2 [61.8 - 68.4] 0.31
'Escherichia coli IAI39' (CU928164) Shigella flexneri ATCC 29903 68.1 [64.2 - 71.7] 76.3 [73.3 - 79.1] 71.8 [68.3 - 75.0] 0.04
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella boydii ATCC 8700 65.6 [61.7 - 69.2] 76.1 [73.1 - 78.9] 69.4 [66.0 - 72.7] 0.36
'Escherichia coli IAI39' (CU928164) Shigella dysenteriae ATCC 13313 61.6 [57.9 - 65.2] 76.1 [73.1 - 78.8] 65.7 [62.3 - 68.9] 0.35
'Escherichia coli SMS-3-5' (CP000970) Shigella flexneri ATCC 29903 66.9 [63.0 - 70.5] 76.0 [73.0 - 78.8] 70.6 [67.1 - 73.8] 0.17
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli IAI39' (CU928164) 62.6 [58.8 - 66.1] 76.0 [73.0 - 78.8] 66.6 [63.2 - 69.8] 0.62
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella flexneri ATCC 29903 60.7 [57.1 - 64.3] 75.9 [72.9 - 78.6] 64.8 [61.5 - 68.1] 0.28
'Escherichia coli SMS-3-5' (CP000970) Shigella boydii ATCC 8700 68.2 [64.3 - 71.8] 75.9 [72.9 - 78.7] 71.8 [68.3 - 75.0] 0.62
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella boydii ATCC 8700 61.3 [57.6 - 64.8] 75.9 [72.9 - 78.7] 65.3 [62.0 - 68.6] 0.72
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 74.2 [70.2 - 77.8] 75.9 [72.9 - 78.6] 77.1 [73.7 - 80.3] 0.04
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli SMS-3-5' (CP000970) 63.7 [59.9 - 67.3] 75.9 [72.9 - 78.6] 67.6 [64.2 - 70.9] 0.75
'Escherichia coli SMS-3-5' (CP000970) Shigella dysenteriae ATCC 13313 62.1 [58.4 - 65.7] 75.8 [72.8 - 78.6] 66.2 [62.8 - 69.4] 0.48
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shigella flexneri ATCC 29903 65.1 [61.2 - 68.7] 75.5 [72.5 - 78.3] 68.8 [65.4 - 72.1] 0.08
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 74.1 [70.1 - 77.7] 75.3 [72.3 - 78.1] 77.0 [73.5 - 80.1] 0.16
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli IAI39' (CU928164) 68.6 [64.7 - 72.2] 75.3 [72.3 - 78.1] 72.0 [68.6 - 75.3] 0.09
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 70.4 [66.5 - 74.0] 75.3 [72.3 - 78.1] 73.7 [70.2 - 76.9] 0.09
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 68.0 [64.1 - 71.6] 75.3 [72.3 - 78.1] 71.5 [68.0 - 74.7] 0.18
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia coli DSM 30083 73.9 [69.9 - 77.5] 75.2 [72.2 - 78.0] 76.8 [73.3 - 79.9] 0.07
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella sonnei ATCC 29930 65.5 [61.7 - 69.2] 75.2 [72.2 - 78.0] 69.2 [65.8 - 72.5] 0.45
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia coli DSM 30083 74.2 [70.3 - 77.9] 75.2 [72.2 - 78.0] 77.1 [73.6 - 80.2] 0.16
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli str. 'clone D i2'' (CP002211) 72.5 [68.6 - 76.2] 75.2 [72.2 - 78.0] 75.6 [72.1 - 78.8] 0.18
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella sonnei ATCC 29930 65.5 [61.7 - 69.2] 75.2 [72.2 - 78.0] 69.2 [65.8 - 72.5] 0.45
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 67.6 [63.7 - 71.2] 75.2 [72.1 - 77.9] 71.1 [67.6 - 74.3] 0.0
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli UMN026' (CU928163) 74.9 [70.9 - 78.5] 75.2 [72.1 - 77.9] 77.6 [74.2 - 80.7] 0.18
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli str. 'clone D i14'' (CP002212) 72.5 [68.6 - 76.2] 75.2 [72.2 - 78.0] 75.6 [72.1 - 78.8] 0.18
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia coli DSM 30083 73.4 [69.4 - 77.0] 75.1 [72.0 - 77.8] 76.3 [72.8 - 79.5] 0.27
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli UMN026' (CU928163) 69.6 [65.7 - 73.2] 75.1 [72.0 - 77.8] 72.9 [69.4 - 76.1] 0.23
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 65.2 [61.4 - 68.8] 75.1 [72.1 - 77.9] 68.9 [65.5 - 72.2] 0.21
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli S88' (CU928161) 76.0 [72.0 - 79.6] 75.0 [72.0 - 77.8] 78.6 [75.2 - 81.7] 0.11
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli S88' (CU928161) 72.8 [68.8 - 76.4] 75.0 [72.0 - 77.8] 75.8 [72.3 - 78.9] 0.02
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli S88' (CU928161) 74.4 [70.4 - 78.0] 75.0 [72.0 - 77.8] 77.2 [73.7 - 80.3] 0.12
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 72.5 [68.5 - 76.1] 75.0 [72.0 - 77.8] 75.5 [72.0 - 78.7] 0.13
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli S88' (CU928161) 74.6 [70.6 - 78.2] 75.0 [72.0 - 77.8] 77.4 [73.9 - 80.5] 0.31
'Escherichia coli UMN026' (CU928163) Escherichia coli DSM 30083 73.9 [69.9 - 77.5] 74.9 [71.9 - 77.7] 76.7 [73.3 - 79.9] 0.07
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli str. 'clone D i2'' (CP002211) 70.1 [66.2 - 73.8] 74.8 [71.8 - 77.6] 73.4 [69.9 - 76.6] 0.11
'Escherichia coli S88' (CU928161) 'Escherichia coli UMN026' (CU928163) 75.1 [71.2 - 78.7] 74.8 [71.8 - 77.6] 77.8 [74.4 - 80.9] 0.04
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 71.1 [67.1 - 74.7] 74.8 [71.8 - 77.6] 74.2 [70.7 - 77.4] 0.11
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia coli str. 'clone D i14'' (CP002212) 70.1 [66.2 - 73.8] 74.8 [71.8 - 77.6] 73.4 [69.9 - 76.6] 0.11
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 70.6 [66.6 - 74.2] 74.8 [71.8 - 77.6] 73.7 [70.3 - 77.0] 0.31
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia coli UMN026' (CU928163) 72.4 [68.5 - 76.1] 74.7 [71.7 - 77.5] 75.4 [71.9 - 78.6] 0.16
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli IAI39' (CU928164) 63.5 [59.8 - 67.1] 74.7 [71.7 - 77.5] 67.3 [63.9 - 70.5] 0.06
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella flexneri ATCC 29903 61.4 [57.7 - 65.0] 74.7 [71.7 - 77.5] 65.3 [61.9 - 68.5] 0.18
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia coli UMN026' (CU928163) 72.4 [68.5 - 76.1] 74.7 [71.7 - 77.5] 75.4 [71.9 - 78.6] 0.16
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 68.5 [64.6 - 72.1] 74.7 [71.7 - 77.5] 71.8 [68.4 - 75.1] 0.2
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli str. 'clone D i2'' (CP002211) 72.1 [68.1 - 75.7] 74.6 [71.6 - 77.4] 75.1 [71.6 - 78.3] 0.24
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia coli DSM 30083 73.8 [69.8 - 77.4] 74.6 [71.6 - 77.4] 76.6 [73.1 - 79.7] 0.02
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli str. 'clone D i14'' (CP002212) 71.2 [67.2 - 74.8] 74.6 [71.6 - 77.4] 74.3 [70.8 - 77.5] 0.02
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia coli str. 'clone D i2'' (CP002211) 71.2 [67.2 - 74.8] 74.6 [71.6 - 77.4] 74.3 [70.8 - 77.5] 0.02
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia coli str. 'clone D i14'' (CP002212) 72.1 [68.1 - 75.7] 74.6 [71.6 - 77.4] 75.1 [71.6 - 78.3] 0.24
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella boydii ATCC 8700 61.9 [58.2 - 65.5] 74.5 [71.5 - 77.3] 65.7 [62.3 - 68.9] 0.63
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli UMN026' (CU928163) 69.2 [65.2 - 72.8] 74.5 [71.5 - 77.3] 72.4 [69.0 - 75.7] 0.14
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli SMS-3-5' (CP000970) 71.5 [67.5 - 75.1] 74.5 [71.5 - 77.3] 74.5 [71.0 - 77.7] 0.04
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli str. 'clone D i2'' (CP002211) 60.9 [57.2 - 64.5] 74.4 [71.3 - 77.2] 64.7 [61.4 - 67.9] 0.69
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli str. 'clone D i14'' (CP002212) 60.9 [57.2 - 64.5] 74.4 [71.3 - 77.2] 64.7 [61.4 - 67.9] 0.69
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 68.1 [64.3 - 71.8] 74.4 [71.4 - 77.2] 71.5 [68.0 - 74.7] 0.15
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Shigella dysenteriae Sd197' (CP000034) 61.3 [57.6 - 64.9] 74.3 [71.3 - 77.1] 65.1 [61.8 - 68.4] 0.86
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 67.8 [63.9 - 71.5] 74.3 [71.3 - 77.1] 71.2 [67.7 - 74.4] 0.09
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shigella dysenteriae ATCC 13313 59.3 [55.7 - 62.9] 74.3 [71.3 - 77.1] 63.2 [59.9 - 66.4] 0.59
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella dysenteriae ATCC 13313 59.5 [55.9 - 63.1] 74.2 [71.2 - 77.0] 63.4 [60.0 - 66.6] 0.42
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella dysenteriae ATCC 13313 59.5 [55.9 - 63.1] 74.2 [71.2 - 77.0] 63.4 [60.0 - 66.6] 0.42
'Escherichia coli S88' (CU928161) Shigella boydii ATCC 8700 64.1 [60.3 - 67.7] 74.1 [71.1 - 76.9] 67.7 [64.3 - 70.9] 0.44
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 61.6 [57.8 - 65.1] 74.1 [71.1 - 76.9] 65.3 [62.0 - 68.5] 0.18
'Escherichia coli S88' (CU928161) Shigella sonnei ATCC 29930 65.8 [61.9 - 69.4] 74.1 [71.1 - 76.9] 69.3 [65.8 - 72.5] 0.33
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli SMS-3-5' (CP000970) 65.3 [61.5 - 68.9] 74.0 [71.0 - 76.8] 68.8 [65.4 - 72.0] 0.08
'Escherichia coli S88' (CU928161) Shigella flexneri ATCC 29903 62.0 [58.3 - 65.6] 73.9 [70.9 - 76.7] 65.7 [62.3 - 68.9] 0.01
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella sonnei ATCC 29930 63.9 [60.2 - 67.5] 73.9 [70.9 - 76.7] 67.5 [64.1 - 70.8] 0.53
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 63.3 [59.5 - 66.9] 73.7 [70.6 - 76.5] 66.9 [63.5 - 70.1] 0.18
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Shigella dysenteriae Sd197' (CP000034) 58.9 [55.2 - 62.4] 73.7 [70.7 - 76.5] 62.7 [59.4 - 65.9] 0.76
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shigella dysenteriae ATCC 13313 57.1 [53.6 - 60.7] 73.7 [70.6 - 76.5] 61.0 [57.7 - 64.2] 0.49
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 60.9 [57.2 - 64.5] 73.6 [70.6 - 76.4] 64.6 [61.3 - 67.9] 0.05
'Shigella dysenteriae Sd197' (CP000034) Escherichia coli DSM 30083 64.0 [60.2 - 67.6] 73.5 [70.4 - 76.3] 67.5 [64.1 - 70.7] 0.61
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella flexneri ATCC 29903 64.3 [60.5 - 67.9] 73.3 [70.2 - 76.1] 67.7 [64.3 - 71.0] 0.11
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella flexneri ATCC 29903 64.3 [60.5 - 67.9] 73.3 [70.2 - 76.1] 67.7 [64.3 - 71.0] 0.11
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia coli DSM 30083 64.3 [60.5 - 67.9] 73.2 [70.2 - 76.0] 67.8 [64.4 - 71.0] 0.11
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli str. 'clone D i14'' (CP002212) 64.2 [60.4 - 67.8] 73.1 [70.1 - 75.9] 67.6 [64.2 - 70.9] 0.02
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli str. 'clone D i2'' (CP002211) 64.2 [60.4 - 67.8] 73.1 [70.1 - 76.0] 67.6 [64.2 - 70.9] 0.02
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia coli S88' (CU928161) 65.7 [61.9 - 69.3] 73.1 [70.1 - 75.9] 69.0 [65.6 - 72.3] 0.14
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia coli S88' (CU928161) 62.7 [59.0 - 66.3] 73.1 [70.1 - 75.9] 66.2 [62.9 - 69.5] 0.57
'Escherichia coli S88' (CU928161) Shigella dysenteriae ATCC 13313 60.5 [56.9 - 64.1] 73.1 [70.1 - 75.9] 64.2 [60.8 - 67.4] 0.3
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 56.3 [52.8 - 59.8] 72.9 [69.9 - 75.7] 60.1 [56.8 - 63.3] 0.09
'Escherichia coli str. 'clone D i14'' (CP002212) Shigella boydii ATCC 8700 64.3 [60.5 - 67.9] 72.9 [69.9 - 75.8] 67.7 [64.3 - 70.9] 0.56
'Escherichia coli str. 'clone D i2'' (CP002211) Shigella boydii ATCC 8700 64.3 [60.5 - 67.9] 72.9 [69.9 - 75.8] 67.7 [64.3 - 70.9] 0.56
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli str. 'clone D i2'' (CP002211) 59.3 [55.6 - 62.8] 72.5 [69.4 - 75.3] 62.9 [59.5 - 66.1] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli str. 'clone D i14'' (CP002212) 59.3 [55.6 - 62.8] 72.5 [69.4 - 75.3] 62.9 [59.5 - 66.1] 0.02
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia coli S88' (CU928161) 60.8 [57.2 - 64.4] 72.4 [69.3 - 75.2] 64.4 [61.0 - 67.6] 0.11
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia coli DSM 30083 60.1 [56.4 - 63.6] 72.3 [69.3 - 75.1] 63.6 [60.3 - 66.8] 0.07
'Escherichia sp. TW09308' (AEME00000000) Shigella sonnei ATCC 29930 60.0 [56.3 - 63.5] 44.1 [41.6 - 46.7] 57.2 [54.0 - 60.3] 0.74
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia sp. TW09308' (AEME00000000) 63.1 [59.3 - 66.7] 44.0 [41.5 - 46.6] 59.7 [56.4 - 62.8] 0.1
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia sp. TW09308' (AEME00000000) 69.9 [66.0 - 73.6] 43.9 [41.3 - 46.4] 65.1 [61.8 - 68.4] 0.3
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 66.9 [63.1 - 70.6] 43.9 [41.4 - 46.4] 62.7 [59.4 - 65.9] 0.52
'Escherichia sp. TW09308' (AEME00000000) Shigella boydii ATCC 8700 55.9 [52.3 - 59.4] 43.8 [41.2 - 46.3] 53.7 [50.5 - 56.7] 0.84
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia marmotae HT073016 65.9 [62.1 - 69.6] 43.7 [41.2 - 46.2] 61.9 [58.6 - 65.1] 0.49
'Escherichia sp. TW09308' (AEME00000000) Escherichia coli DSM 30083 69.7 [65.8 - 73.3] 43.7 [41.2 - 46.3] 64.9 [61.5 - 68.1] 0.37
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli UMN026' (CU928163) 64.3 [60.5 - 67.9] 43.7 [41.2 - 46.3] 60.6 [57.3 - 63.7] 0.44
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli S88' (CU928161) 69.5 [65.6 - 73.1] 43.6 [41.1 - 46.2] 64.7 [61.3 - 67.9] 0.4
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia sp. TW09308' (AEME00000000) 65.3 [61.5 - 68.9] 43.6 [41.1 - 46.2] 61.3 [58.1 - 64.5] 0.48
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli IAI39' (CU928164) 62.0 [58.3 - 65.6] 43.6 [41.1 - 46.2] 58.6 [55.4 - 61.8] 0.35
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia sp. TW09308' (AEME00000000) 63.7 [59.9 - 67.3] 43.6 [41.1 - 46.2] 60.0 [56.8 - 63.2] 0.39
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia marmotae HT073016 61.4 [57.7 - 65.0] 43.5 [41.0 - 46.1] 58.1 [54.9 - 61.3] 0.35
'Escherichia sp. TW09308' (AEME00000000) Shigella dysenteriae ATCC 13313 51.8 [48.4 - 55.3] 43.5 [41.0 - 46.0] 50.2 [47.1 - 53.2] 0.7
'Escherichia coli UMN026' (CU928163) Escherichia marmotae HT073016 63.0 [59.3 - 66.6] 43.5 [41.0 - 46.1] 59.4 [56.2 - 62.6] 0.4
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia marmotae HT073016 59.1 [55.5 - 62.7] 43.5 [41.0 - 46.1] 56.3 [53.1 - 59.4] 0.06
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia sp. TW09308' (AEME00000000) 61.0 [57.3 - 64.5] 43.4 [40.9 - 46.0] 57.7 [54.5 - 60.9] 0.12
'Escherichia sp. TW09308' (AEME00000000) 'Shigella dysenteriae Sd197' (CP000034) 53.1 [49.6 - 56.5] 43.4 [40.9 - 46.0] 51.2 [48.1 - 54.3] 0.97
'Escherichia sp. TW09308' (AEME00000000) Shigella flexneri ATCC 29903 55.3 [51.7 - 58.8] 43.4 [40.9 - 46.0] 53.1 [49.9 - 56.1] 0.39
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli SMS-3-5' (CP000970) 65.8 [62.0 - 69.4] 43.4 [40.9 - 45.9] 61.7 [58.4 - 64.8] 0.22
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia marmotae HT073016 63.3 [59.5 - 66.9] 43.4 [40.9 - 46.0] 59.6 [56.4 - 62.8] 0.44
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia sp. TW09308' (AEME00000000) 63.6 [59.9 - 67.3] 43.3 [40.7 - 45.8] 59.9 [56.6 - 63.0] 0.21
'Shigella dysenteriae Sd197' (CP000034) Escherichia marmotae HT073016 53.6 [50.1 - 57.0] 43.3 [40.8 - 45.9] 51.6 [48.5 - 54.6] 0.94
'Escherichia coli IAI39' (CU928164) Escherichia marmotae HT073016 59.9 [56.3 - 63.5] 43.3 [40.7 - 45.8] 56.8 [53.7 - 60.0] 0.32
'Escherichia coli SMS-3-5' (CP000970) Escherichia marmotae HT073016 65.0 [61.2 - 68.6] 43.3 [40.8 - 45.9] 60.9 [57.7 - 64.1] 0.18
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia marmotae HT073016 65.6 [61.7 - 69.2] 43.3 [40.8 - 45.9] 61.4 [58.1 - 64.6] 0.26
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia marmotae HT073016 60.5 [56.8 - 64.0] 43.3 [40.8 - 45.8] 57.3 [54.1 - 60.4] 0.08
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia marmotae HT073016 61.8 [58.1 - 65.4] 43.2 [40.7 - 45.7] 58.4 [55.1 - 61.5] 0.17
'Escherichia coli S88' (CU928161) Escherichia marmotae HT073016 64.8 [61.0 - 68.5] 43.2 [40.7 - 45.8] 60.8 [57.5 - 64.0] 0.37
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia marmotae HT073016 56.6 [53.0 - 60.1] 43.2 [40.7 - 45.7] 54.1 [50.9 - 57.2] 0.22
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 57.8 [54.2 - 61.3] 43.1 [40.6 - 45.7] 55.1 [51.9 - 58.2] 0.26
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli str. 'clone D i2'' (CP002211) 64.6 [60.8 - 68.2] 43.1 [40.6 - 45.7] 60.6 [57.3 - 63.7] 0.28
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia coli str. 'clone D i14'' (CP002212) 64.6 [60.8 - 68.2] 43.1 [40.6 - 45.7] 60.6 [57.3 - 63.7] 0.28
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia marmotae HT073016 63.0 [59.3 - 66.6] 43.0 [40.5 - 45.6] 59.3 [56.0 - 62.4] 0.25
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia marmotae HT073016 63.0 [59.3 - 66.6] 43.0 [40.5 - 45.6] 59.3 [56.0 - 62.4] 0.25
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia sp. TW09308' (AEME00000000) 53.8 [50.3 - 57.2] 43.0 [40.4 - 45.5] 51.6 [48.6 - 54.7] 0.3
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia marmotae HT073016 52.0 [48.5 - 55.4] 42.9 [40.4 - 45.5] 50.2 [47.1 - 53.2] 0.26
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella sonnei ATCC 29930 58.2 [54.6 - 61.7] 41.8 [39.3 - 44.4] 55.0 [51.8 - 58.1] 1.13
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella dysenteriae ATCC 13313 54.6 [51.1 - 58.1] 41.7 [39.2 - 44.2] 52.0 [48.9 - 55.0] 1.1
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Shigella dysenteriae Sd197' (CP000034) 55.5 [52.0 - 59.0] 41.5 [39.0 - 44.0] 52.6 [49.5 - 55.7] 1.37
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia coli DSM 30083 60.5 [56.9 - 64.1] 41.3 [38.8 - 43.8] 56.7 [53.5 - 59.8] 0.76
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli IAI39' (CU928164) 57.6 [54.0 - 61.2] 41.3 [38.8 - 43.9] 54.3 [51.2 - 57.4] 0.75
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia fergusonii ECD227' (CM001142) 49.6 [46.2 - 53.1] 41.2 [38.7 - 43.7] 47.7 [44.7 - 50.8] 0.36
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia fergusonii ECD227' (CM001142) 49.8 [46.3 - 53.2] 41.2 [38.7 - 43.7] 47.8 [44.8 - 50.8] 0.66
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella boydii ATCC 8700 57.2 [53.6 - 60.7] 41.2 [38.7 - 43.8] 53.9 [50.8 - 57.0] 1.23
'Escherichia fergusonii ECD227' (CM001142) Shigella dysenteriae ATCC 13313 43.2 [39.8 - 46.6] 41.2 [38.7 - 43.7] 42.2 [39.2 - 45.2] 0.97
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella boydii ATCC 8700 45.8 [42.4 - 49.2] 41.2 [38.7 - 43.8] 44.4 [41.5 - 47.5] 1.18
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli str. 'clone D i14'' (CP002212) 59.2 [55.6 - 62.8] 41.2 [38.7 - 43.7] 55.6 [52.4 - 58.7] 0.68
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli IAI39' (CU928164) 50.0 [46.5 - 53.4] 41.2 [38.7 - 43.8] 48.0 [45.0 - 51.0] 0.62
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Escherichia fergusonii ATCC 35469' (CU928158) 48.0 [44.5 - 51.4] 41.2 [38.7 - 43.7] 46.3 [43.3 - 49.3] 0.44
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella flexneri ATCC 29903 44.8 [41.4 - 48.2] 41.2 [38.7 - 43.8] 43.6 [40.6 - 46.6] 0.73
'Escherichia fergusonii ECD227' (CM001142) Shigella boydii ATCC 8700 45.8 [42.5 - 49.3] 41.2 [38.7 - 43.7] 44.5 [41.5 - 47.5] 1.11
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli str. 'clone D i2'' (CP002211) 59.2 [55.6 - 62.8] 41.2 [38.7 - 43.7] 55.6 [52.4 - 58.7] 0.68
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Escherichia fergusonii ATCC 35469 47.5 [44.1 - 51.0] 41.2 [38.7 - 43.7] 45.9 [42.9 - 49.0] 0.46
'Escherichia fergusonii ECD227' (CM001142) Shigella flexneri ATCC 29903 44.9 [41.5 - 48.3] 41.1 [38.6 - 43.6] 43.7 [40.7 - 46.7] 0.66
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Escherichia fergusonii ATCC 35469' (CU928158) 47.9 [44.5 - 51.3] 41.1 [38.6 - 43.6] 46.2 [43.2 - 49.3] 0.73
'Escherichia fergusonii ECD227' (CM001142) 'Shigella dysenteriae Sd197' (CP000034) 44.2 [40.8 - 47.6] 41.1 [38.6 - 43.7] 43.0 [40.1 - 46.1] 1.24
'Escherichia coli IAI39' (CU928164) Escherichia fergusonii ATCC 35469 48.7 [45.2 - 52.1] 41.1 [38.6 - 43.6] 46.9 [43.8 - 49.9] 0.71
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Escherichia fergusonii ATCC 35469 47.6 [44.2 - 51.0] 41.1 [38.6 - 43.7] 46.0 [43.0 - 49.0] 0.75
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli S88' (CU928161) 60.8 [57.1 - 64.4] 41.1 [38.7 - 43.7] 56.8 [53.7 - 60.0] 0.8
'Escherichia fergusonii ATCC 35469' (CU928158) 'Escherichia coli IAI39' (CU928164) 49.0 [45.6 - 52.5] 41.1 [38.6 - 43.6] 47.2 [44.2 - 50.2] 0.69
'Escherichia coli UMN026' (CU928163) Escherichia fergusonii ATCC 35469 50.6 [47.2 - 54.1] 41.1 [38.6 - 43.6] 48.5 [45.5 - 51.5] 0.8
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia fergusonii ECD227' (CM001142) 47.1 [43.7 - 50.5] 41.1 [38.6 - 43.6] 45.5 [42.5 - 48.6] 0.38
'Shigella dysenteriae Sd197' (CP000034) Escherichia fergusonii ATCC 35469 45.1 [41.7 - 48.5] 41.0 [38.5 - 43.6] 43.8 [40.8 - 46.9] 1.33
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Escherichia fergusonii ATCC 35469' (CU928158) 46.3 [42.9 - 49.8] 41.0 [38.5 - 43.6] 44.9 [41.9 - 47.9] 0.46
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella sonnei ATCC 29930 46.1 [42.7 - 49.5] 41.0 [38.5 - 43.5] 44.7 [41.7 - 47.7] 1.08
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli SMS-3-5' (CP000970) 59.7 [56.1 - 63.3] 41.0 [38.5 - 43.5] 55.9 [52.7 - 59.0] 0.61
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Escherichia fergusonii ATCC 35469 46.0 [42.6 - 49.4] 41.0 [38.6 - 43.6] 44.6 [41.6 - 47.6] 0.47
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli SMS-3-5' (CP000970) 50.2 [46.8 - 53.7] 41.0 [38.5 - 43.5] 48.2 [45.1 - 51.2] 0.49
'Escherichia fergusonii ATCC 35469' (CU928158) 'Escherichia coli UMN026' (CU928163) 51.1 [47.6 - 54.5] 41.0 [38.6 - 43.6] 48.9 [45.8 - 51.9] 0.78
'Escherichia coli SMS-3-5' (CP000970) Escherichia fergusonii ATCC 35469 48.9 [45.5 - 52.4] 41.0 [38.5 - 43.5] 47.1 [44.1 - 50.1] 0.58
'Escherichia fergusonii ATCC 35469' (CU928158) Shigella dysenteriae ATCC 13313 43.0 [39.6 - 46.5] 41.0 [38.5 - 43.6] 42.0 [39.1 - 45.1] 1.04
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 57.4 [53.8 - 60.9] 41.0 [38.5 - 43.6] 54.0 [50.9 - 57.1] 0.87
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia fergusonii ATCC 35469' (CU928158) 40.7 [37.3 - 44.1] 41.0 [38.6 - 43.6] 40.0 [37.0 - 43.0] 0.64
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Escherichia fergusonii ATCC 35469 40.4 [37.0 - 43.8] 41.0 [38.6 - 43.6] 39.7 [36.7 - 42.8] 0.66
'Shigella dysenteriae Sd197' (CP000034) 'Escherichia fergusonii ATCC 35469' (CU928158) 44.0 [40.6 - 47.4] 41.0 [38.5 - 43.5] 42.9 [39.9 - 45.9] 1.31
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Escherichia fergusonii ATCC 35469 47.4 [44.0 - 50.8] 41.0 [38.5 - 43.5] 45.8 [42.8 - 48.8] 0.83
'Escherichia coli SMS-3-5' (CP000970) 'Escherichia fergusonii ATCC 35469' (CU928158) 49.3 [45.9 - 52.7] 41.0 [38.5 - 43.5] 47.4 [44.3 - 50.4] 0.56
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia fergusonii ATCC 35469' (CU928158) 47.7 [44.3 - 51.1] 41.0 [38.5 - 43.5] 46.0 [43.0 - 49.1] 0.82
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 56.1 [52.5 - 59.6] 40.9 [38.5 - 43.5] 52.9 [49.8 - 56.0] 0.78
'Escherichia fergusonii ECD227' (CM001142) Shigella sonnei ATCC 29930 47.4 [44.0 - 50.8] 40.9 [38.4 - 43.4] 45.7 [42.7 - 48.8] 1.0
'Escherichia coli str. K-12 substr. W3110' (AP009048) Escherichia fergusonii ATCC 35469 52.6 [49.1 - 56.0] 40.9 [38.4 - 43.5] 50.1 [47.0 - 53.1] 0.88
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli UMN026' (CU928163) 57.4 [53.8 - 61.0] 40.9 [38.4 - 43.4] 54.0 [50.9 - 57.1] 0.83
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shigella flexneri ATCC 29903 54.7 [51.1 - 58.1] 40.9 [38.4 - 43.4] 51.8 [48.7 - 54.8] 0.78
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia fergusonii ECD227' (CM001142) 42.0 [38.6 - 45.4] 40.9 [38.4 - 43.4] 41.1 [38.1 - 44.1] 0.56
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia fergusonii ATCC 35469' (CU928158) 53.1 [49.6 - 56.6] 40.9 [38.4 - 43.5] 50.5 [47.4 - 53.6] 0.86
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia fergusonii ATCC 35469' (CU928158) 51.6 [48.1 - 55.0] 40.8 [38.3 - 43.4] 49.2 [46.2 - 52.3] 0.64
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia fergusonii ECD227' (CM001142) 49.0 [45.6 - 52.5] 40.8 [38.3 - 43.3] 47.1 [44.1 - 50.1] 0.48
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Escherichia fergusonii ECD227' (CM001142) 52.5 [49.0 - 56.0] 40.8 [38.3 - 43.3] 50.0 [46.9 - 53.1] 0.56
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli UMN026' (CU928163) 51.9 [48.5 - 55.4] 40.8 [38.3 - 43.3] 49.5 [46.5 - 52.6] 0.71
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Escherichia fergusonii ATCC 35469 47.9 [44.5 - 51.4] 40.8 [38.3 - 43.3] 46.2 [43.2 - 49.2] 0.57
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli str. K-12 substr. W3110' (AP009048) 60.1 [56.5 - 63.7] 40.8 [38.3 - 43.3] 56.1 [53.0 - 59.3] 0.92
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Escherichia fergusonii ATCC 35469 51.0 [47.5 - 54.4] 40.8 [38.3 - 43.4] 48.7 [45.7 - 51.8] 0.66
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Escherichia fergusonii ECD227' (CM001142) 49.1 [45.7 - 52.6] 40.8 [38.3 - 43.3] 47.2 [44.2 - 50.2] 0.74
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Escherichia fergusonii ECD227' (CM001142) 52.9 [49.4 - 56.4] 40.7 [38.2 - 43.2] 50.3 [47.2 - 53.3] 0.79
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 56.0 [52.4 - 59.5] 40.7 [38.2 - 43.2] 52.8 [49.7 - 55.9] 0.6
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Escherichia fergusonii ATCC 35469' (CU928158) 48.3 [44.9 - 51.7] 40.7 [38.3 - 43.3] 46.5 [43.5 - 49.5] 0.55
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli S88' (CU928161) 53.1 [49.6 - 56.6] 40.6 [38.1 - 43.1] 50.4 [47.3 - 53.5] 0.67
'Escherichia coli O157:H7 str. Sakai' (BA000007) Escherichia fergusonii ATCC 35469 44.4 [41.1 - 47.9] 40.5 [38.0 - 43.1] 43.1 [40.1 - 46.2] 0.62
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 54.0 [50.5 - 57.5] 40.5 [38.0 - 43.1] 51.2 [48.1 - 54.2] 0.49
'Escherichia fergusonii ATCC 35469' (CU928158) 'Escherichia coli S88' (CU928161) 51.4 [47.9 - 54.8] 40.5 [38.0 - 43.0] 48.9 [45.9 - 52.0] 0.74
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia fergusonii ATCC 35469' (CU928158) 44.8 [41.4 - 48.2] 40.5 [38.0 - 43.1] 43.5 [40.5 - 46.5] 0.6
'Escherichia coli S88' (CU928161) Escherichia fergusonii ATCC 35469 50.8 [47.4 - 54.3] 40.5 [38.0 - 43.0] 48.5 [45.5 - 51.6] 0.76
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 52.6 [49.1 - 56.0] 40.4 [37.9 - 42.9] 49.9 [46.9 - 53.0] 0.51
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Escherichia fergusonii ECD227' (CM001142) 46.2 [42.8 - 49.6] 40.4 [37.9 - 42.9] 44.6 [41.6 - 47.6] 0.53
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 53.8 [50.3 - 57.3] 40.4 [37.9 - 42.9] 50.9 [47.8 - 54.0] 0.69
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli O157:H7 str. Sakai' (BA000007) 57.7 [54.1 - 61.2] 40.3 [37.8 - 42.9] 54.1 [50.9 - 57.1] 0.65
'Escherichia fergusonii ECD227' (CM001142) Escherichia coli DSM 30083 51.9 [48.4 - 55.3] 40.3 [37.8 - 42.8] 49.3 [46.3 - 52.4] 0.63
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia coli DSM 30083 50.3 [46.9 - 53.7] 40.2 [37.7 - 42.8] 48.0 [45.0 - 51.0] 0.71
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli str. 'clone D i14'' (CP002212) 50.1 [46.7 - 53.6] 40.2 [37.7 - 42.7] 47.8 [44.8 - 50.9] 0.55
'Escherichia fergusonii ECD227' (CM001142) 'Escherichia coli str. 'clone D i2'' (CP002211) 50.1 [46.7 - 53.6] 40.2 [37.7 - 42.7] 47.8 [44.8 - 50.9] 0.55
'Escherichia coli str. 'clone D i14'' (CP002212) 'Escherichia fergusonii ATCC 35469' (CU928158) 49.3 [45.9 - 52.7] 40.1 [37.7 - 42.7] 47.1 [44.1 - 50.2] 0.62
'Escherichia coli str. 'clone D i14'' (CP002212) Escherichia fergusonii ATCC 35469 48.9 [45.5 - 52.3] 40.1 [37.6 - 42.6] 46.8 [43.8 - 49.8] 0.64
'Escherichia coli str. 'clone D i2'' (CP002211) 'Escherichia fergusonii ATCC 35469' (CU928158) 49.3 [45.9 - 52.7] 40.1 [37.7 - 42.7] 47.1 [44.1 - 50.2] 0.62
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 56.4 [52.8 - 59.9] 40.1 [37.6 - 42.6] 52.9 [49.8 - 56.0] 0.69
'Escherichia coli str. 'clone D i2'' (CP002211) Escherichia fergusonii ATCC 35469 48.9 [45.5 - 52.3] 40.1 [37.6 - 42.6] 46.8 [43.8 - 49.8] 0.64
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia sp. TW09308' (AEME00000000) 57.2 [53.6 - 60.7] 38.5 [36.1 - 41.1] 53.0 [49.9 - 56.1] 0.39
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia marmotae HT073016 56.3 [52.7 - 59.7] 38.2 [35.8 - 40.7] 52.1 [49.1 - 55.2] 0.43
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia fergusonii ATCC 35469' (CU928158) 50.1 [46.6 - 53.5] 34.6 [32.1 - 37.1] 46.0 [43.0 - 49.0] 0.34
'Escherichia sp. TW09308' (AEME00000000) Escherichia fergusonii ATCC 35469 49.5 [46.1 - 53.0] 34.6 [32.1 - 37.1] 45.6 [42.6 - 48.6] 0.36
'Escherichia sp. TW09308' (AEME00000000) 'Escherichia fergusonii ECD227' (CM001142) 51.5 [48.0 - 54.9] 34.6 [32.2 - 37.2] 47.1 [44.1 - 50.2] 0.27
'Escherichia fergusonii ATCC 35469' (CU928158) Escherichia marmotae HT073016 49.5 [46.1 - 52.9] 34.5 [32.1 - 37.0] 45.6 [42.6 - 48.6] 0.38
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Escherichia fergusonii ATCC 35469 44.3 [40.9 - 47.7] 34.4 [32.0 - 36.9] 41.4 [38.4 - 44.4] 0.04
'Escherichia fergusonii ECD227' (CM001142) Escherichia marmotae HT073016 50.1 [46.7 - 53.6] 34.4 [32.0 - 36.9] 46.0 [43.0 - 49.0] 0.3
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia fergusonii ECD227' (CM001142) 44.9 [41.6 - 48.4] 34.3 [31.9 - 36.8] 41.9 [38.9 - 44.9] 0.13
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Escherichia fergusonii ATCC 35469' (CU928158) 43.2 [39.9 - 46.7] 34.2 [31.8 - 36.7] 40.5 [37.5 - 43.5] 0.05
'Shigella dysenteriae Sd197' (CP000034) Levinea malonatica NCTC 10810 32.0 [28.7 - 35.6] 25.8 [23.5 - 28.3] 29.5 [26.6 - 32.6] 2.53
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Levinea malonatica NCTC 10810 33.4 [30.0 - 37.0] 25.8 [23.4 - 28.2] 30.5 [27.6 - 33.6] 3.12
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Citrobacter koseri NCTC 10786 33.0 [29.6 - 36.5] 25.6 [23.2 - 28.0] 30.2 [27.2 - 33.3] 3.14
'Shigella dysenteriae Sd197' (CP000034) Citrobacter koseri NCTC 10786 31.8 [28.4 - 35.4] 25.6 [23.3 - 28.1] 29.3 [26.4 - 32.4] 2.56
'Escherichia coli IAI39' (CU928164) Levinea malonatica NCTC 10810 35.2 [31.8 - 38.7] 25.5 [23.2 - 28.0] 31.8 [28.8 - 34.9] 3.15
'Escherichia coli IAI39' (CU928164) Citrobacter koseri NCTC 10786 35.3 [32.0 - 38.9] 25.5 [23.1 - 27.9] 31.9 [29.0 - 35.0] 3.17
'Escherichia coli str. 'clone D i2'' (CP002211) Levinea malonatica NCTC 10810 36.0 [32.6 - 39.5] 25.5 [23.1 - 28.0] 32.4 [29.4 - 35.4] 3.22
'Escherichia coli str. 'clone D i14'' (CP002212) Levinea malonatica NCTC 10810 36.0 [32.6 - 39.5] 25.5 [23.1 - 28.0] 32.4 [29.4 - 35.4] 3.22
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Levinea malonatica NCTC 10810 32.9 [29.5 - 36.4] 25.5 [23.2 - 28.0] 30.1 [27.2 - 33.2] 3.41
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Levinea malonatica NCTC 10810 33.6 [30.2 - 37.1] 25.5 [23.2 - 28.0] 30.6 [27.7 - 33.7] 3.39
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Citrobacter koseri NCTC 10786 32.9 [29.5 - 36.5] 25.5 [23.1 - 28.0] 30.1 [27.2 - 33.2] 3.43
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Levinea malonatica NCTC 10810 34.8 [31.4 - 38.3] 25.5 [23.2 - 28.0] 31.5 [28.6 - 34.6] 3.03
'Escherichia coli str. 'clone D i2'' (CP002211) Citrobacter koseri NCTC 10786 35.6 [32.2 - 39.1] 25.4 [23.1 - 27.9] 32.0 [29.1 - 35.1] 3.25
'Escherichia coli S88' (CU928161) Citrobacter koseri NCTC 10786 35.3 [32.0 - 38.9] 25.4 [23.1 - 27.9] 31.9 [28.9 - 35.0] 3.12
'Escherichia coli S88' (CU928161) Levinea malonatica NCTC 10810 35.3 [31.9 - 38.8] 25.4 [23.1 - 27.9] 31.9 [28.9 - 35.0] 3.1
'Escherichia coli UMN026' (CU928163) Levinea malonatica NCTC 10810 35.1 [31.8 - 38.7] 25.4 [23.1 - 27.9] 31.7 [28.8 - 34.8] 3.07
'Escherichia coli str. K-12 substr. W3110' (AP009048) Levinea malonatica NCTC 10810 36.8 [33.4 - 40.3] 25.4 [23.1 - 27.9] 32.9 [30.0 - 36.0] 2.98
'Escherichia coli str. 'clone D i14'' (CP002212) Citrobacter koseri NCTC 10786 35.6 [32.2 - 39.1] 25.4 [23.1 - 27.9] 32.0 [29.1 - 35.1] 3.25
'Escherichia coli UMN026' (CU928163) Citrobacter koseri NCTC 10786 35.0 [31.6 - 38.5] 25.4 [23.1 - 27.9] 31.6 [28.7 - 34.7] 3.09
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Levinea malonatica NCTC 10810 35.2 [31.9 - 38.8] 25.4 [23.1 - 27.9] 31.8 [28.9 - 34.9] 3.3
'Escherichia coli str. K-12 substr. W3110' (AP009048) Citrobacter koseri NCTC 10786 36.6 [33.2 - 40.1] 25.3 [23.0 - 27.8] 32.7 [29.8 - 35.8] 3.01
'Escherichia coli SMS-3-5' (CP000970) Levinea malonatica NCTC 10810 35.4 [32.0 - 38.9] 25.3 [23.0 - 27.8] 31.9 [28.9 - 35.0] 3.29
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Citrobacter koseri NCTC 10786 33.2 [29.8 - 36.8] 25.3 [23.0 - 27.8] 30.3 [27.4 - 33.4] 3.41
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Citrobacter koseri NCTC 10786 34.5 [31.1 - 38.1] 25.3 [23.0 - 27.8] 31.2 [28.3 - 34.3] 3.32
'Escherichia coli O157:H7 str. Sakai' (BA000007) Levinea malonatica NCTC 10810 33.0 [29.6 - 36.5] 25.2 [22.9 - 27.7] 30.1 [27.1 - 33.2] 3.25
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Citrobacter koseri NCTC 10786 34.7 [31.3 - 38.2] 25.2 [22.9 - 27.7] 31.3 [28.4 - 34.4] 3.05
'Escherichia coli SMS-3-5' (CP000970) Citrobacter koseri NCTC 10786 35.2 [31.8 - 38.7] 25.2 [22.9 - 27.7] 31.7 [28.8 - 34.8] 3.31
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Levinea malonatica NCTC 10810 34.8 [31.5 - 38.4] 25.2 [22.9 - 27.7] 31.5 [28.5 - 34.5] 3.21
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Citrobacter koseri NCTC 10786 34.8 [31.4 - 38.3] 25.2 [22.8 - 27.7] 31.4 [28.5 - 34.5] 3.23
'Escherichia coli O157:H7 str. Sakai' (BA000007) Citrobacter koseri NCTC 10786 33.1 [29.7 - 36.6] 25.1 [22.8 - 27.6] 30.1 [27.2 - 33.2] 3.27
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Levinea malonatica NCTC 10810 30.2 [26.9 - 33.8] 25.1 [22.8 - 27.6] 28.0 [25.1 - 31.1] 3.21
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Levinea malonatica NCTC 10810 32.9 [29.5 - 36.5] 25.0 [22.6 - 27.4] 30.0 [27.0 - 33.1] 3.9
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Citrobacter koseri NCTC 10786 30.2 [26.8 - 33.8] 25.0 [22.7 - 27.5] 27.9 [25.0 - 31.0] 3.23
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Citrobacter koseri NCTC 10786 32.6 [29.2 - 36.1] 24.9 [22.6 - 27.4] 29.7 [26.8 - 32.8] 3.92
'Shigella dysenteriae Sd197' (CP000034) Citrobacter amalonaticus NCTC 10805 31.8 [28.4 - 35.3] 24.9 [22.6 - 27.4] 29.1 [26.2 - 32.2] 2.18
'Escherichia sp. TW09308' (AEME00000000) Citrobacter koseri NCTC 10786 33.3 [29.9 - 36.8] 24.8 [22.5 - 27.3] 30.2 [27.2 - 33.3] 3.53
'Escherichia sp. TW09308' (AEME00000000) Levinea malonatica NCTC 10810 34.1 [30.8 - 37.7] 24.8 [22.5 - 27.3] 30.8 [27.9 - 33.9] 3.51
'Escherichia fergusonii ATCC 35469' (CU928158) Citrobacter koseri NCTC 10786 33.6 [30.2 - 37.1] 24.8 [22.5 - 27.2] 30.4 [27.5 - 33.5] 3.87
'Escherichia fergusonii ATCC 35469' (CU928158) Levinea malonatica NCTC 10810 33.6 [30.2 - 37.1] 24.7 [22.4 - 27.2] 30.4 [27.5 - 33.5] 3.85
'Escherichia coli str. K-12 substr. W3110' (AP009048) Citrobacter amalonaticus NCTC 10805 36.2 [32.9 - 39.8] 24.6 [22.3 - 27.0] 32.3 [29.3 - 35.3] 2.63
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Citrobacter amalonaticus NCTC 10805 32.7 [29.3 - 36.3] 24.6 [22.3 - 27.0] 29.7 [26.8 - 32.8] 2.76
'Escherichia coli S88' (CU928161) Citrobacter amalonaticus NCTC 10805 35.1 [31.7 - 38.6] 24.5 [22.1 - 26.9] 31.4 [28.5 - 34.5] 2.75
'Escherichia fergusonii ECD227' (CM001142) Citrobacter koseri NCTC 10786 33.4 [30.0 - 37.0] 24.5 [22.2 - 27.0] 30.2 [27.3 - 33.3] 3.79
'Escherichia fergusonii ECD227' (CM001142) Levinea malonatica NCTC 10810 33.8 [30.4 - 37.3] 24.5 [22.2 - 27.0] 30.5 [27.5 - 33.6] 3.77
'Shigella dysenteriae Sd197' (CP000034) Salmonella enterica LT2 28.1 [24.7 - 31.7] 24.5 [22.2 - 27.0] 26.2 [23.3 - 29.3] 0.99
'Escherichia coli UMN026' (CU928163) Citrobacter amalonaticus NCTC 10805 35.2 [31.8 - 38.7] 24.5 [22.1 - 26.9] 31.5 [28.5 - 34.6] 2.71
'Shigella dysenteriae Sd197' (CP000034) Salmonella typhimurium ATCC 13311 28.4 [25.1 - 32.1] 24.5 [22.2 - 27.0] 26.5 [23.6 - 29.6] 0.86
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Citrobacter amalonaticus NCTC 10805 32.1 [28.7 - 35.7] 24.5 [22.2 - 26.9] 29.2 [26.3 - 32.3] 2.94
'Escherichia coli O157:H7 str. Sakai' (BA000007) Citrobacter amalonaticus NCTC 10805 33.6 [30.2 - 37.1] 24.5 [22.2 - 27.0] 30.3 [27.4 - 33.4] 2.89
'Escherichia coli IAI39' (CU928164) Citrobacter amalonaticus NCTC 10805 34.2 [30.8 - 37.8] 24.4 [22.1 - 26.9] 30.8 [27.8 - 33.9] 2.8
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Citrobacter amalonaticus NCTC 10805 32.3 [28.9 - 35.9] 24.4 [22.1 - 26.8] 29.3 [26.4 - 32.4] 3.04
'Escherichia coli SMS-3-5' (CP000970) Citrobacter amalonaticus NCTC 10805 35.8 [32.4 - 39.3] 24.4 [22.1 - 26.9] 31.9 [28.9 - 35.0] 2.93
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Citrobacter amalonaticus NCTC 10805 35.7 [32.3 - 39.2] 24.4 [22.1 - 26.9] 31.8 [28.9 - 34.9] 2.86
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Citrobacter amalonaticus NCTC 10805 30.5 [27.2 - 34.1] 24.4 [22.1 - 26.8] 28.0 [25.1 - 31.2] 2.86
'Escherichia coli str. 'clone D i14'' (CP002212) Citrobacter amalonaticus NCTC 10805 34.8 [31.4 - 38.4] 24.4 [22.1 - 26.9] 31.2 [28.3 - 34.3] 2.87
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Citrobacter amalonaticus NCTC 10805 33.1 [29.7 - 36.7] 24.4 [22.1 - 26.9] 30.0 [27.0 - 33.1] 3.06
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Citrobacter amalonaticus NCTC 10805 31.4 [28.0 - 35.0] 24.4 [22.1 - 26.9] 28.7 [25.8 - 31.8] 3.55
'Escherichia coli str. 'clone D i2'' (CP002211) Citrobacter amalonaticus NCTC 10805 34.8 [31.4 - 38.4] 24.4 [22.1 - 26.9] 31.2 [28.3 - 34.3] 2.87
'Shigella dysenteriae Sd197' (CP000034) Salmonella choleraesuis DSM 14846 28.4 [25.0 - 32.0] 24.3 [22.0 - 26.8] 26.4 [23.5 - 29.5] 0.89
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Citrobacter amalonaticus NCTC 10805 33.5 [30.1 - 37.0] 24.3 [22.0 - 26.8] 30.2 [27.3 - 33.3] 2.68
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella typhimurium ATCC 13311 30.3 [26.9 - 33.9] 24.2 [21.9 - 26.6] 27.8 [24.9 - 30.9] 1.74
'Shigella dysenteriae Sd197' (CP000034) Salmonella typhimurium JCM 1652 28.2 [24.9 - 31.8] 24.2 [21.9 - 26.7] 26.3 [23.4 - 29.4] 0.81
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella enterica LT2 29.7 [26.3 - 33.3] 24.2 [21.9 - 26.7] 27.3 [24.4 - 30.4] 1.57
'Shigella dysenteriae Sd197' (CP000034) Salmonella enteritidis ATCC 13076 29.0 [25.6 - 32.6] 24.2 [21.9 - 26.6] 26.8 [23.9 - 29.9] 0.89
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella typhimurium ATCC 13311 32.5 [29.1 - 36.0] 24.2 [21.9 - 26.6] 29.4 [26.5 - 32.5] 1.31
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella enterica LT2 32.0 [28.6 - 35.5] 24.2 [21.8 - 26.6] 29.0 [26.1 - 32.1] 1.44
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella typhimurium ATCC 13311 29.7 [26.3 - 33.3] 24.2 [21.9 - 26.7] 27.3 [24.4 - 30.4] 1.45
'Escherichia fergusonii ATCC 35469' (CU928158) Citrobacter amalonaticus NCTC 10805 33.8 [30.4 - 37.4] 24.1 [21.8 - 26.6] 30.4 [27.5 - 33.5] 3.49
'Escherichia sp. TW09308' (AEME00000000) Citrobacter amalonaticus NCTC 10805 33.8 [30.4 - 37.4] 24.1 [21.8 - 26.5] 30.4 [27.4 - 33.5] 3.15
'Escherichia coli SMS-3-5' (CP000970) Salmonella typhimurium ATCC 13311 30.9 [27.6 - 34.5] 24.1 [21.8 - 26.6] 28.3 [25.4 - 31.4] 1.62
'Escherichia coli UMN026' (CU928163) Salmonella enterica LT2 31.5 [28.1 - 35.1] 24.1 [21.8 - 26.5] 28.7 [25.8 - 31.8] 1.52
'Shigella dysenteriae Sd197' (CP000034) Salmonella enterica subsp. arizonae NCTC 8297 28.6 [25.3 - 32.2] 24.1 [21.8 - 26.6] 26.5 [23.6 - 29.6] 0.27
'Escherichia coli SMS-3-5' (CP000970) Salmonella enterica LT2 30.5 [27.1 - 34.1] 24.1 [21.8 - 26.6] 27.9 [25.0 - 31.0] 1.74
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella typhimurium JCM 1652 30.0 [26.7 - 33.6] 24.1 [21.8 - 26.6] 27.6 [24.7 - 30.7] 1.69
'Escherichia coli UMN026' (CU928163) Salmonella typhimurium ATCC 13311 32.0 [28.6 - 35.6] 24.1 [21.8 - 26.5] 29.0 [26.1 - 32.1] 1.4
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella typhimurium JCM 1652 29.4 [26.0 - 33.0] 24.1 [21.8 - 26.6] 27.1 [24.2 - 30.2] 1.4
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella enterica LT2 29.2 [25.8 - 32.8] 24.0 [21.7 - 26.5] 26.9 [24.0 - 30.0] 1.7
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella enterica LT2 28.7 [25.3 - 32.3] 24.0 [21.7 - 26.4] 26.6 [23.7 - 29.7] 1.85
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella typhimurium ATCC 13311 29.5 [26.1 - 33.1] 24.0 [21.7 - 26.5] 27.2 [24.3 - 30.3] 1.58
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella enterica LT2 29.6 [26.3 - 33.2] 24.0 [21.7 - 26.4] 27.3 [24.4 - 30.4] 1.75
'Escherichia coli S88' (CU928161) Salmonella enterica LT2 30.9 [27.5 - 34.5] 24.0 [21.7 - 26.4] 28.2 [25.3 - 31.3] 1.56
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella enteritidis ATCC 13076 29.8 [26.5 - 33.4] 24.0 [21.7 - 26.4] 27.4 [24.5 - 30.5] 1.47
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella typhimurium ATCC 13311 26.7 [23.4 - 30.4] 24.0 [21.7 - 26.4] 25.1 [22.2 - 28.2] 1.54
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella choleraesuis DSM 14846 29.1 [25.7 - 32.7] 24.0 [21.7 - 26.4] 26.9 [24.0 - 30.0] 1.47
'Escherichia coli IAI39' (CU928164) Salmonella typhimurium ATCC 13311 30.6 [27.2 - 34.2] 24.0 [21.7 - 26.5] 28.0 [25.1 - 31.1] 1.48
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella enterica LT2 29.5 [26.2 - 33.2] 24.0 [21.7 - 26.4] 27.2 [24.3 - 30.3] 1.86
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella typhimurium ATCC 13311 30.1 [26.7 - 33.7] 24.0 [21.7 - 26.4] 27.6 [24.7 - 30.7] 1.63
'Shigella dysenteriae Sd197' (CP000034) Salmonella bongori NCTC 12419 28.2 [24.8 - 31.8] 24.0 [21.6 - 26.4] 26.1 [23.3 - 29.3] 0.08
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella typhimurium ATCC 13311 29.1 [25.7 - 32.7] 24.0 [21.7 - 26.5] 26.9 [24.0 - 30.0] 1.72
'Escherichia coli IAI39' (CU928164) Salmonella enterica LT2 30.4 [27.0 - 34.0] 24.0 [21.7 - 26.5] 27.8 [24.9 - 30.9] 1.61
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella enterica LT2 26.6 [23.2 - 30.2] 23.9 [21.6 - 26.4] 24.9 [22.1 - 28.0] 1.66
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella enterica LT2 30.0 [26.6 - 33.6] 23.9 [21.6 - 26.4] 27.5 [24.6 - 30.6] 1.49
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella enterica LT2 32.0 [28.6 - 35.6] 23.9 [21.6 - 26.3] 29.0 [26.1 - 32.1] 1.66
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella typhimurium ATCC 13311 31.4 [28.0 - 35.0] 23.9 [21.6 - 26.4] 28.6 [25.6 - 31.7] 1.55
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella typhimurium JCM 1652 29.0 [25.6 - 32.6] 23.9 [21.6 - 26.3] 26.8 [23.9 - 29.9] 1.67
'Escherichia coli SMS-3-5' (CP000970) Salmonella choleraesuis DSM 14846 30.3 [26.9 - 33.9] 23.9 [21.6 - 26.3] 27.7 [24.8 - 30.8] 1.64
'Escherichia coli IAI39' (CU928164) Salmonella choleraesuis DSM 14846 29.7 [26.3 - 33.3] 23.9 [21.6 - 26.4] 27.3 [24.4 - 30.4] 1.51
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella choleraesuis DSM 14846 29.1 [25.7 - 32.7] 23.9 [21.6 - 26.4] 26.9 [24.0 - 30.0] 1.76
'Escherichia fergusonii ECD227' (CM001142) Citrobacter amalonaticus NCTC 10805 33.7 [30.3 - 37.3] 23.9 [21.6 - 26.4] 30.2 [27.3 - 33.3] 3.42
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella choleraesuis DSM 14846 28.7 [25.4 - 32.4] 23.9 [21.6 - 26.4] 26.6 [23.7 - 29.7] 1.75
'Escherichia coli SMS-3-5' (CP000970) Salmonella typhimurium JCM 1652 30.6 [27.2 - 34.2] 23.9 [21.6 - 26.3] 27.9 [25.0 - 31.0] 1.57
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella typhimurium ATCC 13311 29.0 [25.6 - 32.6] 23.9 [21.6 - 26.4] 26.8 [23.9 - 29.9] 2.23
'Escherichia coli S88' (CU928161) Salmonella typhimurium ATCC 13311 31.2 [27.8 - 34.8] 23.9 [21.6 - 26.4] 28.4 [25.5 - 31.5] 1.43
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella typhimurium ATCC 13311 30.0 [26.6 - 33.6] 23.9 [21.6 - 26.4] 27.5 [24.6 - 30.6] 1.36
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella enteritidis ATCC 13076 30.3 [27.0 - 33.9] 23.9 [21.6 - 26.3] 27.8 [24.9 - 30.9] 1.65
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella typhimurium JCM 1652 29.7 [26.4 - 33.4] 23.9 [21.6 - 26.3] 27.3 [24.4 - 30.4] 1.58
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella enterica LT2 28.6 [25.3 - 32.2] 23.9 [21.6 - 26.3] 26.5 [23.6 - 29.6] 2.36
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella enterica subsp. arizonae NCTC 8297 31.3 [27.9 - 34.9] 23.9 [21.6 - 26.4] 28.5 [25.6 - 31.6] 0.72
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella enterica LT2 31.0 [27.7 - 34.6] 23.9 [21.6 - 26.4] 28.3 [25.4 - 31.4] 1.68
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella enterica LT2 31.0 [27.7 - 34.6] 23.9 [21.6 - 26.4] 28.3 [25.4 - 31.4] 1.68
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella choleraesuis DSM 14846 31.9 [28.5 - 35.5] 23.9 [21.6 - 26.4] 28.9 [26.0 - 32.0] 1.34
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella typhimurium ATCC 13311 31.4 [28.0 - 35.0] 23.9 [21.6 - 26.4] 28.6 [25.6 - 31.7] 1.55
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella typhimurium JCM 1652 32.2 [28.8 - 35.7] 23.9 [21.6 - 26.4] 29.1 [26.2 - 32.2] 1.26
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella enterica subsp. arizonae NCTC 8297 27.8 [24.4 - 31.4] 23.9 [21.6 - 26.4] 25.8 [23.0 - 29.0] 0.85
'Escherichia coli IAI39' (CU928164) Salmonella enteritidis ATCC 13076 30.5 [27.1 - 34.1] 23.9 [21.6 - 26.4] 27.9 [25.0 - 31.0] 1.51
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella choleraesuis DSM 14846 28.8 [25.4 - 32.4] 23.9 [21.6 - 26.4] 26.6 [23.7 - 29.7] 1.65
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella enteritidis ATCC 13076 30.4 [27.0 - 34.0] 23.9 [21.6 - 26.4] 27.8 [24.9 - 30.9] 1.76
'Escherichia coli SMS-3-5' (CP000970) Salmonella enteritidis ATCC 13076 31.5 [28.2 - 35.1] 23.8 [21.5 - 26.3] 28.6 [25.7 - 31.7] 1.64
'Escherichia coli UMN026' (CU928163) Salmonella choleraesuis DSM 14846 30.8 [27.4 - 34.4] 23.8 [21.5 - 26.2] 28.1 [25.1 - 31.2] 1.42
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella enterica LT2 30.4 [27.0 - 34.0] 23.8 [21.5 - 26.2] 27.8 [24.9 - 30.9] 2.3
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella enteritidis ATCC 13076 27.3 [23.9 - 30.9] 23.8 [21.5 - 26.2] 25.4 [22.6 - 28.5] 1.56
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella enteritidis ATCC 13076 30.0 [26.6 - 33.6] 23.8 [21.5 - 26.3] 27.5 [24.6 - 30.6] 1.6
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella enteritidis ATCC 13076 29.8 [26.4 - 33.4] 23.8 [21.5 - 26.3] 27.4 [24.5 - 30.5] 1.74
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella typhimurium JCM 1652 29.6 [26.2 - 33.2] 23.8 [21.5 - 26.2] 27.2 [24.3 - 30.3] 1.31
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella enteritidis ATCC 13076 33.1 [29.7 - 36.6] 23.8 [21.5 - 26.3] 29.8 [26.8 - 32.9] 1.34
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella choleraesuis DSM 14846 29.3 [25.9 - 32.9] 23.8 [21.5 - 26.3] 27.0 [24.1 - 30.1] 1.39
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella choleraesuis DSM 14846 29.0 [25.6 - 32.6] 23.8 [21.5 - 26.3] 26.7 [23.8 - 29.8] 1.6
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella typhimurium ATCC 13311 32.2 [28.9 - 35.8] 23.8 [21.5 - 26.3] 29.2 [26.2 - 32.3] 1.54
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella typhimurium JCM 1652 29.1 [25.8 - 32.8] 23.8 [21.5 - 26.3] 26.9 [24.0 - 30.0] 1.53
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella choleraesuis DSM 14846 31.4 [28.0 - 34.9] 23.8 [21.5 - 26.2] 28.5 [25.6 - 31.6] 1.56
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella enteritidis ATCC 13076 30.1 [26.8 - 33.7] 23.8 [21.5 - 26.3] 27.6 [24.7 - 30.7] 1.38
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella typhimurium ATCC 13311 30.8 [27.5 - 34.4] 23.8 [21.5 - 26.2] 28.1 [25.2 - 31.2] 2.18
'Escherichia coli UMN026' (CU928163) Salmonella typhimurium JCM 1652 31.6 [28.3 - 35.2] 23.8 [21.5 - 26.3] 28.7 [25.8 - 31.8] 1.35
'Escherichia coli IAI39' (CU928164) Salmonella typhimurium JCM 1652 30.3 [26.9 - 33.9] 23.8 [21.5 - 26.3] 27.7 [24.8 - 30.8] 1.43
'Escherichia coli UMN026' (CU928163) Salmonella enterica subsp. arizonae NCTC 8297 29.8 [26.4 - 33.4] 23.8 [21.5 - 26.3] 27.3 [24.4 - 30.4] 0.8
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella enteritidis ATCC 13076 32.9 [29.5 - 36.5] 23.8 [21.5 - 26.2] 29.6 [26.7 - 32.7] 1.56
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella typhimurium JCM 1652 26.5 [23.1 - 30.1] 23.8 [21.5 - 26.3] 24.8 [21.9 - 27.9] 1.49
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella choleraesuis DSM 14846 26.4 [23.0 - 30.0] 23.8 [21.5 - 26.3] 24.7 [21.9 - 27.8] 1.56
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella choleraesuis DSM 14846 30.1 [26.8 - 33.7] 23.7 [21.4 - 26.2] 27.6 [24.7 - 30.7] 2.2
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella typhimurium JCM 1652 31.0 [27.6 - 34.6] 23.7 [21.4 - 26.1] 28.2 [25.3 - 31.3] 1.5
'Escherichia coli S88' (CU928161) Salmonella enterica subsp. arizonae NCTC 8297 29.5 [26.1 - 33.1] 23.7 [21.4 - 26.2] 27.1 [24.2 - 30.2] 0.84
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella typhimurium JCM 1652 31.9 [28.5 - 35.5] 23.7 [21.4 - 26.2] 28.9 [25.9 - 32.0] 1.49
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella typhimurium JCM 1652 31.0 [27.6 - 34.6] 23.7 [21.4 - 26.1] 28.2 [25.3 - 31.3] 1.5
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella enterica subsp. arizonae NCTC 8297 30.2 [26.8 - 33.8] 23.7 [21.4 - 26.1] 27.6 [24.7 - 30.7] 0.95
'Escherichia coli IAI39' (CU928164) Salmonella enterica subsp. arizonae NCTC 8297 30.3 [26.9 - 33.9] 23.7 [21.4 - 26.2] 27.7 [24.8 - 30.8] 0.89
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella choleraesuis DSM 14846 30.4 [27.0 - 34.0] 23.7 [21.4 - 26.1] 27.7 [24.8 - 30.9] 1.58
'Escherichia coli UMN026' (CU928163) Salmonella enteritidis ATCC 13076 32.0 [28.7 - 35.6] 23.7 [21.4 - 26.2] 29.0 [26.1 - 32.1] 1.42
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella enterica subsp. arizonae NCTC 8297 28.6 [25.2 - 32.2] 23.7 [21.4 - 26.2] 26.4 [23.5 - 29.5] 0.98
'Escherichia coli S88' (CU928161) Salmonella enteritidis ATCC 13076 32.2 [28.8 - 35.8] 23.7 [21.4 - 26.2] 29.1 [26.2 - 32.2] 1.46
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella enteritidis ATCC 13076 32.1 [28.7 - 35.6] 23.7 [21.4 - 26.1] 29.0 [26.1 - 32.1] 1.58
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella typhimurium JCM 1652 28.8 [25.4 - 32.4] 23.7 [21.4 - 26.2] 26.6 [23.7 - 29.7] 2.18
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella enterica subsp. arizonae NCTC 8297 28.0 [24.7 - 31.7] 23.7 [21.4 - 26.1] 26.0 [23.1 - 29.1] 1.64
'Escherichia coli S88' (CU928161) Salmonella typhimurium JCM 1652 30.8 [27.4 - 34.4] 23.7 [21.4 - 26.2] 28.1 [25.1 - 31.2] 1.38
'Escherichia coli S88' (CU928161) Salmonella choleraesuis DSM 14846 30.4 [27.0 - 34.0] 23.7 [21.4 - 26.2] 27.8 [24.8 - 30.9] 1.46
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella enteritidis ATCC 13076 32.1 [28.7 - 35.6] 23.7 [21.4 - 26.1] 29.0 [26.1 - 32.1] 1.58
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella choleraesuis DSM 14846 30.4 [27.0 - 34.0] 23.7 [21.4 - 26.1] 27.7 [24.8 - 30.9] 1.58
'Escherichia coli SMS-3-5' (CP000970) Salmonella enterica subsp. arizonae NCTC 8297 30.1 [26.7 - 33.7] 23.7 [21.4 - 26.2] 27.6 [24.7 - 30.7] 1.02
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella enterica subsp. arizonae NCTC 8297 28.3 [25.0 - 32.0] 23.7 [21.4 - 26.2] 26.2 [23.3 - 29.3] 1.15
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella enterica subsp. arizonae NCTC 8297 27.9 [24.5 - 31.5] 23.7 [21.4 - 26.1] 25.9 [23.0 - 29.0] 1.13
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella enteritidis ATCC 13076 29.9 [26.5 - 33.5] 23.6 [21.3 - 26.1] 27.4 [24.5 - 30.5] 2.25
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella enteritidis ATCC 13076 30.6 [27.3 - 34.2] 23.6 [21.3 - 26.1] 27.9 [25.0 - 31.0] 2.2
'Escherichia sp. TW09308' (AEME00000000) Salmonella enterica LT2 30.1 [26.7 - 33.7] 23.6 [21.3 - 26.1] 27.5 [24.6 - 30.6] 1.96
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella enterica subsp. arizonae NCTC 8297 29.9 [26.5 - 33.5] 23.6 [21.3 - 26.1] 27.4 [24.4 - 30.5] 0.96
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Salmonella bongori NCTC 12419 28.2 [24.9 - 31.9] 23.6 [21.3 - 26.0] 26.1 [23.2 - 29.2] 0.66
'Escherichia coli IAI39' (CU928164) Salmonella bongori NCTC 12419 29.8 [26.4 - 33.4] 23.6 [21.3 - 26.0] 27.3 [24.4 - 30.4] 0.7
'Escherichia coli str. K-12 substr. W3110' (AP009048) Salmonella bongori NCTC 12419 32.0 [28.6 - 35.5] 23.6 [21.3 - 26.0] 28.9 [26.0 - 32.0] 0.53
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella enterica subsp. arizonae NCTC 8297 26.4 [23.0 - 30.0] 23.6 [21.3 - 26.1] 24.7 [21.8 - 27.8] 0.95
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella choleraesuis DSM 14846 28.6 [25.2 - 32.2] 23.6 [21.3 - 26.1] 26.4 [23.5 - 29.5] 2.25
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella enterica subsp. arizonae NCTC 8297 28.8 [25.5 - 32.4] 23.6 [21.3 - 26.1] 26.6 [23.7 - 29.7] 0.77
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella typhimurium JCM 1652 30.4 [27.1 - 34.0] 23.6 [21.3 - 26.0] 27.8 [24.8 - 30.9] 2.13
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella enterica subsp. arizonae NCTC 8297 29.9 [26.5 - 33.5] 23.6 [21.3 - 26.1] 27.4 [24.4 - 30.5] 0.96
'Escherichia sp. TW09308' (AEME00000000) Salmonella typhimurium ATCC 13311 29.8 [26.5 - 33.4] 23.6 [21.3 - 26.1] 27.3 [24.4 - 30.4] 1.84
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella enterica subsp. arizonae NCTC 8297 28.3 [25.0 - 31.9] 23.6 [21.3 - 26.1] 26.2 [23.3 - 29.3] 1.03
'Escherichia sp. TW09308' (AEME00000000) Salmonella enteritidis ATCC 13076 30.7 [27.4 - 34.3] 23.6 [21.3 - 26.0] 28.0 [25.1 - 31.1] 1.86
'Escherichia coli UMN026' (CU928163) Salmonella bongori NCTC 12419 30.1 [26.8 - 33.7] 23.6 [21.3 - 26.0] 27.5 [24.6 - 30.6] 0.61
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Salmonella bongori NCTC 12419 28.8 [25.4 - 32.4] 23.5 [21.2 - 25.9] 26.5 [23.6 - 29.6] 1.45
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella enterica subsp. arizonae NCTC 8297 29.2 [25.9 - 32.9] 23.5 [21.2 - 26.0] 26.9 [24.0 - 30.0] 1.58
'Escherichia coli SMS-3-5' (CP000970) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.5 [21.2 - 26.0] 27.6 [24.7 - 30.7] 0.83
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Pseudocitrobacter faecalis DSM 27453 24.7 [21.4 - 28.3] 23.5 [21.2 - 26.0] 23.4 [20.5 - 26.5] 2.35
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Salmonella bongori NCTC 12419 28.5 [25.2 - 32.2] 23.5 [21.2 - 25.9] 26.3 [23.4 - 29.4] 0.84
'Escherichia fergusonii ECD227' (CM001142) Salmonella typhimurium ATCC 13311 31.2 [27.8 - 34.8] 23.5 [21.2 - 26.0] 28.3 [25.4 - 31.4] 2.1
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.5 [21.2 - 25.9] 27.5 [24.6 - 30.6] 0.75
'Escherichia coli O157:H7 str. Sakai' (BA000007) Salmonella bongori NCTC 12419 29.1 [25.8 - 32.7] 23.5 [21.2 - 25.9] 26.8 [23.9 - 29.9] 0.79
'Escherichia coli S88' (CU928161) Salmonella bongori NCTC 12419 30.3 [26.9 - 33.9] 23.5 [21.2 - 25.9] 27.6 [24.7 - 30.7] 0.65
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Salmonella bongori NCTC 12419 28.7 [25.4 - 32.4] 23.5 [21.2 - 25.9] 26.5 [23.6 - 29.6] 0.95
'Escherichia fergusonii ECD227' (CM001142) Salmonella enterica LT2 30.7 [27.4 - 34.3] 23.5 [21.2 - 26.0] 28.0 [25.1 - 31.1] 2.23
'Escherichia sp. TW09308' (AEME00000000) Salmonella typhimurium JCM 1652 29.6 [26.2 - 33.2] 23.5 [21.2 - 25.9] 27.1 [24.2 - 30.2] 1.79
'Escherichia sp. TW09308' (AEME00000000) Salmonella choleraesuis DSM 14846 29.4 [26.0 - 33.0] 23.5 [21.2 - 26.0] 27.0 [24.1 - 30.1] 1.86
'Escherichia fergusonii ATCC 35469' (CU928158) Salmonella bongori NCTC 12419 29.2 [25.9 - 32.8] 23.4 [21.1 - 25.8] 26.8 [23.9 - 29.9] 1.39
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Enterobacter cloacae ATCC 13047 23.4 [20.1 - 27.1] 23.4 [21.1 - 25.9] 22.4 [19.6 - 25.5] 4.7
'Escherichia fergusonii ECD227' (CM001142) Salmonella typhimurium JCM 1652 30.8 [27.4 - 34.4] 23.4 [21.1 - 25.8] 28.0 [25.1 - 31.1] 2.05
'Escherichia fergusonii ECD227' (CM001142) Salmonella enteritidis ATCC 13076 31.0 [27.7 - 34.6] 23.4 [21.1 - 25.9] 28.2 [25.3 - 31.3] 2.13
'Escherichia coli str. 'clone D i2'' (CP002211) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.4 [21.1 - 25.9] 27.5 [24.6 - 30.6] 0.77
'Escherichia coli str. 'clone D i14'' (CP002212) Salmonella bongori NCTC 12419 30.2 [26.8 - 33.8] 23.4 [21.1 - 25.9] 27.5 [24.6 - 30.6] 0.77
'Escherichia coli UMN026' (CU928163) Pseudocitrobacter faecalis DSM 27453 26.1 [22.7 - 29.7] 23.4 [21.1 - 25.8] 24.4 [21.6 - 27.5] 2.3
'Escherichia sp. TW09308' (AEME00000000) Salmonella enterica subsp. arizonae NCTC 8297 28.9 [25.5 - 32.5] 23.4 [21.1 - 25.9] 26.6 [23.7 - 29.7] 1.24
'Shigella dysenteriae Sd197' (CP000034) Enterobacter cloacae ATCC 13047 24.6 [21.3 - 28.3] 23.4 [21.2 - 25.9] 23.3 [20.5 - 26.4] 3.33
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Salmonella bongori NCTC 12419 28.5 [25.1 - 32.1] 23.4 [21.1 - 25.9] 26.3 [23.4 - 29.4] 0.94
'Escherichia fergusonii ECD227' (CM001142) Salmonella choleraesuis DSM 14846 30.8 [27.4 - 34.4] 23.4 [21.1 - 25.9] 28.0 [25.1 - 31.1] 2.13
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Salmonella bongori NCTC 12419 29.2 [25.8 - 32.8] 23.3 [21.0 - 25.8] 26.8 [23.9 - 29.9] 0.58
'Shigella dysenteriae Sd197' (CP000034) Pseudocitrobacter faecalis DSM 27453 25.0 [21.7 - 28.7] 23.3 [21.0 - 25.8] 23.6 [20.8 - 26.7] 1.77
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Salmonella bongori NCTC 12419 26.6 [23.3 - 30.3] 23.3 [21.1 - 25.8] 24.9 [22.0 - 28.0] 0.75
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Pseudocitrobacter faecalis DSM 27453 24.8 [21.5 - 28.4] 23.3 [21.0 - 25.7] 23.4 [20.6 - 26.5] 2.62
'Escherichia fergusonii ECD227' (CM001142) Salmonella enterica subsp. arizonae NCTC 8297 29.0 [25.7 - 32.7] 23.3 [21.0 - 25.8] 26.7 [23.8 - 29.8] 1.51
'Escherichia sp. TW09308' (AEME00000000) Salmonella bongori NCTC 12419 29.3 [25.9 - 32.9] 23.2 [20.9 - 25.7] 26.8 [23.9 - 29.9] 1.05
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Pseudocitrobacter faecalis DSM 27453 23.3 [20.0 - 26.9] 23.2 [21.0 - 25.7] 22.2 [19.4 - 25.3] 2.44
'Escherichia coli O157:H7 str. Sakai' (BA000007) Pseudocitrobacter faecalis DSM 27453 25.0 [21.7 - 28.7] 23.2 [20.9 - 25.6] 23.6 [20.8 - 26.7] 2.48
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Pseudocitrobacter faecalis DSM 27453 24.8 [21.5 - 28.5] 23.1 [20.8 - 25.6] 23.4 [20.6 - 26.5] 2.64
'Escherichia fergusonii ECD227' (CM001142) Salmonella bongori NCTC 12419 29.8 [26.4 - 33.4] 23.1 [20.8 - 25.5] 27.2 [24.3 - 30.3] 1.32
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Pseudocitrobacter faecalis DSM 27453 24.9 [21.6 - 28.6] 23.1 [20.9 - 25.6] 23.5 [20.7 - 26.6] 2.26
'Escherichia coli IAI39' (CU928164) Pseudocitrobacter faecalis DSM 27453 25.0 [21.7 - 28.7] 23.1 [20.8 - 25.5] 23.6 [20.7 - 26.7] 2.39
'Escherichia coli SMS-3-5' (CP000970) Pseudocitrobacter faecalis DSM 27453 26.0 [22.7 - 29.6] 23.1 [20.8 - 25.6] 24.3 [21.5 - 27.4] 2.52
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Pseudocitrobacter faecalis DSM 27453 24.1 [20.8 - 27.7] 23.1 [20.8 - 25.6] 22.8 [20.0 - 25.9] 2.53
'Escherichia fergusonii ATCC 35469' (CU928158) Pseudocitrobacter faecalis DSM 27453 24.5 [21.2 - 28.1] 23.0 [20.7 - 25.5] 23.1 [20.3 - 26.2] 3.08
'Escherichia coli str. K-12 substr. W3110' (AP009048) Pseudocitrobacter faecalis DSM 27453 27.2 [23.8 - 30.8] 23.0 [20.7 - 25.5] 25.2 [22.3 - 28.3] 2.22
'Shigella dysenteriae Sd197' (CP000034) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.3 [22.0 - 28.9] 23.0 [20.7 - 25.5] 23.8 [20.9 - 26.9] 4.3
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Pseudocitrobacter faecalis DSM 27453 26.2 [22.9 - 29.8] 23.0 [20.7 - 25.4] 24.5 [21.6 - 27.6] 2.44
'Escherichia coli str. K-12 substr. W3110' (AP009048) Enterobacter cloacae ATCC 13047 25.6 [22.2 - 29.2] 23.0 [20.7 - 25.5] 24.0 [21.1 - 27.1] 3.78
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Pseudocitrobacter faecalis DSM 27453 23.8 [20.5 - 27.4] 23.0 [20.7 - 25.5] 22.6 [19.8 - 25.7] 3.13
'Escherichia coli IAI39' (CU928164) Enterobacter cloacae ATCC 13047 24.5 [21.2 - 28.2] 23.0 [20.7 - 25.4] 23.2 [20.3 - 26.2] 3.95
'Escherichia coli S88' (CU928161) Enterobacter cloacae ATCC 13047 24.3 [21.0 - 28.0] 22.9 [20.6 - 25.4] 23.0 [20.2 - 26.1] 3.9
'Escherichia coli S88' (CU928161) Pseudocitrobacter faecalis DSM 27453 25.4 [22.1 - 29.1] 22.9 [20.6 - 25.3] 23.8 [21.0 - 26.9] 2.34
'Escherichia coli str. 'clone D i2'' (CP002211) Pseudocitrobacter faecalis DSM 27453 25.1 [21.7 - 28.7] 22.9 [20.7 - 25.4] 23.6 [20.7 - 26.7] 2.46
'Escherichia coli str. 'clone D i14'' (CP002212) Pseudocitrobacter faecalis DSM 27453 25.1 [21.7 - 28.7] 22.9 [20.7 - 25.4] 23.6 [20.7 - 26.7] 2.46
'Shigella dysenteriae Sd197' (CP000034) Cronobacter sakazakii NBRC 102416 20.1 [16.9 - 23.7] 22.9 [20.7 - 25.4] 19.6 [16.9 - 22.6] 5.47
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Enterobacter cloacae ATCC 13047 23.3 [20.0 - 26.9] 22.9 [20.6 - 25.3] 22.2 [19.4 - 25.2] 3.92
'Escherichia coli SMS-3-5' (CP000970) Enterobacter cloacae ATCC 13047 24.9 [21.6 - 28.6] 22.9 [20.6 - 25.4] 23.4 [20.6 - 26.5] 4.09
'Escherichia coli UMN026' (CU928163) Enterobacter cloacae ATCC 13047 25.0 [21.6 - 28.6] 22.9 [20.6 - 25.4] 23.5 [20.6 - 26.6] 3.87
'Escherichia coli IAI39' (CU928164) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.6 [22.3 - 29.2] 22.8 [20.5 - 25.2] 24.0 [21.1 - 27.1] 4.92
'Escherichia coli UMN026' (CU928163) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 26.1 [22.8 - 29.8] 22.8 [20.5 - 25.2] 24.3 [21.5 - 27.5] 4.84
'Escherichia coli str. 'clone D i2'' (CP002211) Enterobacter cloacae ATCC 13047 23.9 [20.6 - 27.6] 22.8 [20.5 - 25.3] 22.7 [19.9 - 25.8] 4.02
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 24.4 [21.0 - 28.0] 22.8 [20.5 - 25.3] 23.0 [20.2 - 26.1] 4.89
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Enterobacter cloacae ATCC 13047 23.3 [20.1 - 27.0] 22.8 [20.5 - 25.3] 22.2 [19.4 - 25.3] 4.19
'Escherichia coli SMS-3-5' (CP000970) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.8 [22.5 - 29.5] 22.8 [20.6 - 25.3] 24.2 [21.3 - 27.3] 5.06
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter sakazakii NBRC 102416 19.5 [16.4 - 23.1] 22.8 [20.5 - 25.2] 19.1 [16.4 - 22.1] 6.83
'Escherichia coli str. 'clone D i14'' (CP002212) Enterobacter cloacae ATCC 13047 23.9 [20.6 - 27.6] 22.8 [20.5 - 25.3] 22.7 [19.9 - 25.8] 4.02
'Escherichia coli O157:H7 str. Sakai' (BA000007) Enterobacter cloacae ATCC 13047 24.0 [20.7 - 27.6] 22.8 [20.5 - 25.2] 22.7 [19.9 - 25.8] 4.05
'Shigella dysenteriae Sd197' (CP000034) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.1 [22.8 - 29.8] 22.8 [20.5 - 25.2] 24.4 [21.5 - 27.5] 4.03
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 24.2 [20.8 - 27.8] 22.8 [20.5 - 25.2] 22.8 [20.0 - 25.9] 5.16
'Escherichia coli str. K-12 substr. W3110' (AP009048) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 28.4 [25.1 - 32.1] 22.7 [20.4 - 25.1] 26.1 [23.2 - 29.2] 4.75
'Escherichia sp. TW09308' (AEME00000000) Pseudocitrobacter faecalis DSM 27453 24.5 [21.2 - 28.2] 22.7 [20.4 - 25.1] 23.1 [20.3 - 26.2] 2.74
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Enterobacter cloacae ATCC 13047 22.5 [19.2 - 26.2] 22.7 [20.4 - 25.1] 21.5 [18.7 - 24.6] 4.01
'Escherichia coli S88' (CU928161) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.7 [22.4 - 29.4] 22.7 [20.5 - 25.2] 24.1 [21.2 - 27.2] 4.87
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Enterobacter cloacae ATCC 13047 24.1 [20.8 - 27.8] 22.7 [20.4 - 25.1] 22.8 [20.0 - 25.9] 3.83
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 24.8 [21.4 - 28.4] 22.7 [20.4 - 25.2] 23.3 [20.5 - 26.4] 4.61
'Escherichia coli str. 'clone D i2'' (CP002211) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.7 [22.4 - 29.4] 22.7 [20.5 - 25.2] 24.1 [21.2 - 27.2] 4.99
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 23.5 [20.2 - 27.1] 22.7 [20.4 - 25.1] 22.3 [19.5 - 25.4] 5.4
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Enterobacter cloacae ATCC 13047 24.8 [21.5 - 28.5] 22.7 [20.4 - 25.1] 23.3 [20.5 - 26.4] 4.01
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 24.9 [21.6 - 28.5] 22.7 [20.4 - 25.1] 23.4 [20.5 - 26.5] 5.07
'Escherichia coli UMN026' (CU928163) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.3 [23.0 - 30.0] 22.7 [20.4 - 25.1] 24.5 [21.6 - 27.6] 4.56
'Escherichia fergusonii ECD227' (CM001142) Pseudocitrobacter faecalis DSM 27453 25.0 [21.6 - 28.6] 22.7 [20.4 - 25.1] 23.5 [20.6 - 26.6] 3.01
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Enterobacter cloacae ATCC 13047 23.6 [20.3 - 27.2] 22.7 [20.4 - 25.1] 22.4 [19.6 - 25.4] 4.21
'Escherichia coli SMS-3-5' (CP000970) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.6 [23.2 - 30.2] 22.7 [20.4 - 25.1] 24.7 [21.8 - 27.8] 4.78
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Enterobacter cloacae ATCC 13047 23.0 [19.7 - 26.6] 22.7 [20.4 - 25.1] 21.9 [19.1 - 25.0] 4.1
'Escherichia coli str. 'clone D i14'' (CP002212) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.7 [22.4 - 29.4] 22.7 [20.5 - 25.2] 24.1 [21.2 - 27.2] 4.99
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.6 [22.3 - 29.3] 22.6 [20.3 - 25.1] 24.0 [21.1 - 27.1] 4.8
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 23.2 [19.9 - 26.9] 22.6 [20.3 - 25.0] 22.1 [19.3 - 25.1] 4.98
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 23.9 [20.6 - 27.5] 22.6 [20.3 - 25.0] 22.6 [19.8 - 25.7] 5.67
'Escherichia coli S88' (CU928161) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.9 [23.6 - 30.6] 22.6 [20.3 - 25.0] 24.9 [22.1 - 28.0] 4.6
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 24.7 [21.4 - 28.4] 22.6 [20.3 - 25.1] 23.3 [20.4 - 26.4] 4.89
'Escherichia coli O157:H7 str. Sakai' (BA000007) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.1 [21.8 - 28.7] 22.6 [20.4 - 25.1] 23.5 [20.7 - 26.6] 5.02
'Escherichia coli IAI39' (CU928164) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.2 [22.8 - 29.8] 22.6 [20.3 - 25.1] 24.4 [21.5 - 27.5] 4.65
'Escherichia fergusonii ATCC 35469' (CU928158) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.6 [22.2 - 29.2] 22.6 [20.3 - 25.0] 23.9 [21.1 - 27.0] 5.62
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 26.4 [23.0 - 30.0] 22.6 [20.4 - 25.1] 24.5 [21.7 - 27.6] 4.98
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 25.6 [22.3 - 29.3] 22.5 [20.2 - 24.9] 23.9 [21.1 - 27.0] 4.79
'Escherichia coli str. K-12 substr. W3110' (AP009048) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 28.5 [25.2 - 32.2] 22.5 [20.3 - 25.0] 26.1 [23.2 - 29.2] 4.48
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 25.5 [22.2 - 29.2] 22.5 [20.2 - 25.0] 23.8 [21.0 - 26.9] 4.9
'Escherichia coli str. 'clone D i2'' (CP002211) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.7 [23.4 - 30.4] 22.5 [20.2 - 25.0] 24.8 [21.9 - 27.9] 4.72
'Escherichia coli str. 'clone D i14'' (CP002212) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.7 [23.4 - 30.4] 22.5 [20.2 - 25.0] 24.8 [21.9 - 27.9] 4.72
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.5 [22.2 - 29.2] 22.5 [20.3 - 25.0] 23.8 [21.0 - 26.9] 5.18
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.6 [23.2 - 30.2] 22.5 [20.3 - 25.0] 24.7 [21.8 - 27.8] 4.7
'Escherichia fergusonii ATCC 35469' (CU928158) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 25.9 [22.5 - 29.5] 22.5 [20.3 - 25.0] 24.1 [21.3 - 27.2] 5.34
'Escherichia fergusonii ATCC 35469' (CU928158) Enterobacter cloacae ATCC 13047 24.8 [21.5 - 28.5] 22.5 [20.2 - 25.0] 23.3 [20.5 - 26.4] 4.65
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 23.9 [20.6 - 27.5] 22.4 [20.1 - 24.8] 22.6 [19.7 - 25.6] 4.7
'Escherichia coli O157:H7 str. Sakai' (BA000007) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 25.9 [22.5 - 29.5] 22.4 [20.2 - 24.9] 24.1 [21.3 - 27.2] 4.74
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 25.8 [22.4 - 29.4] 22.4 [20.2 - 24.9] 24.0 [21.2 - 27.1] 4.53
'Escherichia sp. TW09308' (AEME00000000) Enterobacter cloacae ATCC 13047 23.3 [20.0 - 26.9] 22.3 [20.1 - 24.8] 22.1 [19.3 - 25.2] 4.31
'Escherichia coli IAI39' (CU928164) Kosakonia sacchari SP1 22.3 [19.1 - 26.0] 22.3 [20.0 - 24.7] 21.3 [18.5 - 24.4] 3.11
'Shigella dysenteriae Sd197' (CP000034) Kosakonia sacchari SP1 22.2 [18.9 - 25.8] 22.3 [20.1 - 24.8] 21.2 [18.4 - 24.3] 2.49
'Escherichia coli O157:H7 str. Sakai' (BA000007) Kosakonia sacchari SP1 21.6 [18.3 - 25.2] 22.3 [20.1 - 24.8] 20.7 [18.0 - 23.8] 3.21
'Escherichia sp. TW09308' (AEME00000000) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 24.7 [21.3 - 28.3] 22.3 [20.0 - 24.7] 23.1 [20.3 - 26.2] 5.28
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Kosakonia sacchari SP1 20.1 [16.9 - 23.7] 22.3 [20.1 - 24.8] 19.6 [16.8 - 22.6] 3.17
'Escherichia coli str. K-12 substr. W3110' (AP009048) Kosakonia sacchari SP1 22.8 [19.5 - 26.4] 22.2 [19.9 - 24.7] 21.7 [18.9 - 24.8] 2.94
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Kosakonia sacchari SP1 21.2 [18.0 - 24.8] 22.2 [20.0 - 24.7] 20.4 [17.7 - 23.5] 3.08
'Escherichia coli S88' (CU928161) Kosakonia sacchari SP1 22.4 [19.2 - 26.1] 22.2 [20.0 - 24.7] 21.4 [18.6 - 24.5] 3.06
'Escherichia coli UMN026' (CU928163) Kosakonia sacchari SP1 22.4 [19.2 - 26.1] 22.2 [19.9 - 24.6] 21.4 [18.6 - 24.5] 3.03
'Escherichia sp. TW09308' (AEME00000000) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 24.7 [21.4 - 28.4] 22.2 [20.0 - 24.7] 23.2 [20.4 - 26.3] 5.0
'Escherichia fergusonii ECD227' (CM001142) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 26.2 [22.8 - 29.8] 22.2 [19.9 - 24.6] 24.3 [21.4 - 27.4] 5.27
'Escherichia coli str. 'clone D i14'' (CP002212) Kosakonia sacchari SP1 22.5 [19.2 - 26.1] 22.2 [19.9 - 24.7] 21.4 [18.6 - 24.5] 3.18
'Escherichia fergusonii ECD227' (CM001142) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 25.8 [22.4 - 29.4] 22.2 [20.0 - 24.7] 24.0 [21.1 - 27.1] 5.54
'Escherichia coli SMS-3-5' (CP000970) Kosakonia sacchari SP1 22.6 [19.3 - 26.2] 22.2 [20.0 - 24.7] 21.5 [18.8 - 24.6] 3.25
'Escherichia coli str. 'clone D i2'' (CP002211) Kosakonia sacchari SP1 22.5 [19.2 - 26.1] 22.2 [19.9 - 24.7] 21.4 [18.6 - 24.5] 3.18
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Kosakonia sacchari SP1 21.5 [18.3 - 25.2] 22.1 [19.8 - 24.6] 20.7 [17.9 - 23.7] 3.37
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Kosakonia sacchari SP1 21.4 [18.2 - 25.0] 22.1 [19.8 - 24.5] 20.6 [17.8 - 23.6] 3.86
'Escherichia fergusonii ECD227' (CM001142) Enterobacter cloacae ATCC 13047 24.8 [21.4 - 28.4] 22.1 [19.8 - 24.5] 23.2 [20.4 - 26.3] 4.57
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Kosakonia sacchari SP1 21.3 [18.1 - 24.9] 22.1 [19.9 - 24.6] 20.5 [17.7 - 23.5] 3.35
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Kosakonia sacchari SP1 21.6 [18.3 - 25.2] 22.1 [19.9 - 24.6] 20.7 [17.9 - 23.8] 3.26
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Kosakonia sacchari SP1 22.9 [19.6 - 26.6] 22.0 [19.7 - 24.4] 21.8 [19.0 - 24.8] 3.17
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Kosakonia sacchari SP1 22.0 [18.7 - 25.6] 22.0 [19.8 - 24.5] 21.0 [18.2 - 24.1] 2.99
'Shigella dysenteriae Sd197' (CP000034) Kosakonia cowanii JCM 10956 21.1 [17.9 - 24.7] 22.0 [19.8 - 24.5] 20.3 [17.6 - 23.4] 4.93
'Escherichia coli str. K-12 substr. W3110' (AP009048) Kosakonia cowanii JCM 10956 22.2 [19.0 - 25.9] 21.9 [19.6 - 24.3] 21.2 [18.4 - 24.2] 5.38
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Kosakonia cowanii JCM 10956 20.9 [17.7 - 24.5] 21.9 [19.6 - 24.3] 20.2 [17.4 - 23.2] 5.69
'Escherichia coli O157:H7 str. Sakai' (BA000007) Kosakonia cowanii JCM 10956 21.1 [17.9 - 24.7] 21.9 [19.6 - 24.3] 20.3 [17.6 - 23.4] 5.64
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Kosakonia cowanii JCM 10956 20.6 [17.4 - 24.3] 21.9 [19.7 - 24.4] 19.9 [17.2 - 23.0] 5.78
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Kosakonia cowanii JCM 10956 19.9 [16.7 - 23.5] 21.9 [19.6 - 24.3] 19.3 [16.6 - 22.3] 5.6
'Escherichia fergusonii ATCC 35469' (CU928158) Kosakonia sacchari SP1 22.9 [19.6 - 26.6] 21.9 [19.6 - 24.3] 21.7 [18.9 - 24.8] 3.81
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter sakazakii NBRC 102416 20.8 [17.6 - 24.4] 21.9 [19.6 - 24.3] 20.1 [17.3 - 23.1] 5.92
'Escherichia coli SMS-3-5' (CP000970) Cronobacter sakazakii NBRC 102416 19.8 [16.7 - 23.4] 21.8 [19.6 - 24.3] 19.3 [16.6 - 22.3] 6.22
'Escherichia coli S88' (CU928161) Kosakonia cowanii JCM 10956 21.5 [18.3 - 25.1] 21.8 [19.5 - 24.2] 20.6 [17.9 - 23.7] 5.49
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella boydii ATCC 8700 17.4 [14.3 - 20.9] 21.8 [19.5 - 24.2] 17.2 [14.6 - 20.2] 5.39
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Kosakonia cowanii JCM 10956 21.5 [18.2 - 25.1] 21.8 [19.5 - 24.2] 20.6 [17.8 - 23.6] 5.6
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter sakazakii NBRC 102416 25.9 [22.6 - 29.6] 21.8 [19.6 - 24.3] 24.0 [21.2 - 27.1] 2.64
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Kosakonia cowanii JCM 10956 21.1 [17.8 - 24.7] 21.8 [19.5 - 24.2] 20.3 [17.5 - 23.3] 5.8
'Escherichia coli str. 'clone D i14'' (CP002212) Kosakonia cowanii JCM 10956 21.3 [18.1 - 25.0] 21.8 [19.6 - 24.3] 20.5 [17.7 - 23.5] 5.62
'Escherichia coli IAI39' (CU928164) Kosakonia cowanii JCM 10956 21.6 [18.3 - 25.2] 21.8 [19.5 - 24.2] 20.7 [17.9 - 23.7] 5.54
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter sakazakii NBRC 102416 18.9 [15.7 - 22.4] 21.8 [19.5 - 24.2] 18.5 [15.8 - 21.5] 6.05
'Shigella dysenteriae Sd197' (CP000034) Cronobacter malonaticus LMG 23826 19.5 [16.3 - 23.1] 21.8 [19.5 - 24.2] 19.0 [16.3 - 22.0] 5.59
'Escherichia sp. TW09308' (AEME00000000) Kosakonia sacchari SP1 22.3 [19.1 - 25.9] 21.8 [19.5 - 24.2] 21.2 [18.5 - 24.3] 3.47
'Escherichia coli str. 'clone D i2'' (CP002211) Kosakonia cowanii JCM 10956 21.3 [18.1 - 25.0] 21.8 [19.6 - 24.3] 20.5 [17.7 - 23.5] 5.62
'Escherichia fergusonii ECD227' (CM001142) Kosakonia sacchari SP1 22.4 [19.1 - 26.0] 21.8 [19.5 - 24.2] 21.3 [18.5 - 24.4] 3.73
'Escherichia coli SMS-3-5' (CP000970) Kosakonia cowanii JCM 10956 21.8 [18.5 - 25.4] 21.8 [19.6 - 24.3] 20.8 [18.1 - 23.9] 5.68
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Kosakonia cowanii JCM 10956 20.6 [17.4 - 24.2] 21.8 [19.6 - 24.3] 19.9 [17.1 - 22.9] 5.51
'Escherichia coli IAI39' (CU928164) Cronobacter sakazakii NBRC 102416 20.1 [16.9 - 23.7] 21.7 [19.5 - 24.2] 19.5 [16.8 - 22.5] 6.09
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Kosakonia cowanii JCM 10956 21.3 [18.1 - 24.9] 21.7 [19.4 - 24.1] 20.4 [17.7 - 23.5] 5.42
'Escherichia coli SMS-3-5' (CP000970) Cronobacter malonaticus LMG 23826 19.5 [16.3 - 23.1] 21.7 [19.4 - 24.1] 19.0 [16.3 - 22.0] 6.35
'Escherichia coli UMN026' (CU928163) Kosakonia cowanii JCM 10956 21.8 [18.6 - 25.4] 21.7 [19.4 - 24.1] 20.8 [18.1 - 23.9] 5.46
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella bongori NCTC 12419 16.9 [13.8 - 20.4] 21.7 [19.4 - 24.1] 16.8 [14.2 - 19.7] 5.18
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter malonaticus LMG 23826 19.2 [16.1 - 22.8] 21.7 [19.4 - 24.1] 18.7 [16.1 - 21.8] 6.47
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter malonaticus LMG 23826 19.4 [16.2 - 23.0] 21.7 [19.4 - 24.1] 18.9 [16.2 - 21.9] 6.96
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter sakazakii NBRC 102416 18.1 [15.1 - 21.7] 21.7 [19.4 - 24.1] 17.9 [15.2 - 20.8] 6.14
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter sakazakii NBRC 102416 19.2 [16.1 - 22.8] 21.7 [19.4 - 24.1] 18.8 [16.1 - 21.8] 6.34
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Kosakonia cowanii JCM 10956 20.6 [17.4 - 24.2] 21.7 [19.5 - 24.2] 19.9 [17.1 - 22.9] 6.29
'Escherichia fergusonii ATCC 35469' (CU928158) Kosakonia cowanii JCM 10956 21.5 [18.3 - 25.1] 21.7 [19.4 - 24.1] 20.6 [17.8 - 23.6] 6.24
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella typhimurium ATCC 13311 16.9 [13.9 - 20.4] 21.7 [19.5 - 24.2] 16.8 [14.2 - 19.8] 4.39
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter malonaticus LMG 23826 26.3 [23.0 - 30.0] 21.7 [19.5 - 24.2] 24.3 [21.5 - 27.4] 2.77
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella enterica LT2 16.8 [13.8 - 20.4] 21.7 [19.4 - 24.1] 16.8 [14.2 - 19.7] 4.27
'Escherichia coli UMN026' (CU928163) Cronobacter sakazakii NBRC 102416 19.7 [16.5 - 23.3] 21.7 [19.5 - 24.2] 19.1 [16.4 - 22.2] 6.0
'Escherichia coli S88' (CU928161) Cronobacter sakazakii NBRC 102416 20.3 [17.1 - 23.9] 21.6 [19.4 - 24.1] 19.6 [16.9 - 22.6] 6.04
'Escherichia coli IAI39' (CU928164) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.3] 21.6 [19.3 - 24.0] 19.2 [16.5 - 22.2] 6.21
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter sakazakii NBRC 102416 19.2 [16.1 - 22.8] 21.6 [19.4 - 24.1] 18.8 [16.1 - 21.8] 6.33
'Escherichia sp. TW09308' (AEME00000000) Kosakonia cowanii JCM 10956 21.2 [18.0 - 24.8] 21.6 [19.3 - 24.0] 20.3 [17.6 - 23.4] 5.9
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Enterobacter cloacae ATCC 13047 22.5 [19.2 - 26.2] 21.6 [19.4 - 24.1] 21.4 [18.6 - 24.5] 0.51
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter sakazakii NBRC 102416 19.2 [16.1 - 22.8] 21.6 [19.3 - 24.0] 18.8 [16.1 - 21.8] 6.78
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter sakazakii NBRC 102416 19.4 [16.3 - 23.0] 21.6 [19.4 - 24.0] 18.9 [16.2 - 21.9] 6.23
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter sakazakii NBRC 102416 19.3 [16.1 - 22.9] 21.6 [19.4 - 24.1] 18.8 [16.1 - 21.8] 6.18
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter muytjensii ATCC 51329 24.6 [21.3 - 28.3] 21.6 [19.3 - 24.0] 23.0 [20.2 - 26.1] 3.64
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter malonaticus LMG 23826 19.0 [15.9 - 22.6] 21.5 [19.2 - 23.9] 18.6 [15.9 - 21.6] 6.18
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter malonaticus LMG 23826 19.4 [16.2 - 23.0] 21.5 [19.2 - 23.9] 18.9 [16.2 - 21.9] 6.31
'Escherichia coli UMN026' (CU928163) Cronobacter malonaticus LMG 23826 19.7 [16.5 - 23.3] 21.5 [19.3 - 23.9] 19.1 [16.4 - 22.1] 6.13
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.3] 21.5 [19.2 - 23.9] 19.2 [16.5 - 22.2] 6.27
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter malonaticus LMG 23826 19.2 [16.1 - 22.8] 21.5 [19.2 - 23.9] 18.7 [16.1 - 21.7] 6.36
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter sakazakii NBRC 102416 20.0 [16.9 - 23.6] 21.5 [19.3 - 23.9] 19.4 [16.7 - 22.4] 6.16
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter sakazakii NBRC 102416 20.0 [16.9 - 23.7] 21.5 [19.3 - 24.0] 19.4 [16.7 - 22.4] 5.97
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter malonaticus LMG 23826 18.3 [15.2 - 21.8] 21.5 [19.3 - 23.9] 18.0 [15.3 - 20.9] 6.27
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Levinea malonatica NCTC 10810 22.7 [19.4 - 26.3] 21.5 [19.2 - 23.9] 21.5 [18.7 - 24.5] 0.29
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Citrobacter koseri NCTC 10786 18.5 [15.4 - 22.1] 21.5 [19.2 - 23.9] 18.2 [15.5 - 21.2] 2.7
'Shigella dysenteriae Sd197' (CP000034) Cronobacter muytjensii ATCC 51329 19.2 [16.1 - 22.8] 21.5 [19.2 - 23.9] 18.7 [16.1 - 21.8] 6.47
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.4] 21.5 [19.2 - 23.9] 19.2 [16.5 - 22.2] 6.28
'Shigella dysenteriae Sd197' (CP000034) Shimwellia blattae DSM 4481 17.2 [14.2 - 20.7] 21.5 [19.2 - 23.9] 17.1 [14.5 - 20.0] 5.26
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter malonaticus LMG 23826 19.7 [16.6 - 23.4] 21.5 [19.2 - 23.9] 19.2 [16.5 - 22.2] 6.28
'Escherichia coli S88' (CU928161) Cronobacter malonaticus LMG 23826 19.9 [16.7 - 23.5] 21.5 [19.2 - 23.9] 19.3 [16.5 - 22.3] 6.16
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter sakazakii NBRC 102416 20.0 [16.9 - 23.6] 21.5 [19.3 - 23.9] 19.4 [16.7 - 22.4] 6.16
'Escherichia fergusonii ECD227' (CM001142) Kosakonia cowanii JCM 10956 21.6 [18.3 - 25.2] 21.5 [19.3 - 23.9] 20.6 [17.9 - 23.7] 6.16
'Shigella dysenteriae Sd197' (CP000034) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.2 [14.2 - 20.7] 21.5 [19.2 - 23.9] 17.1 [14.5 - 20.0] 5.26
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella dysenteriae ATCC 13313 17.1 [14.1 - 20.7] 21.5 [19.2 - 23.9] 17.0 [14.4 - 20.0] 5.53
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter sakazakii NBRC 102416 19.8 [16.7 - 23.4] 21.5 [19.3 - 23.9] 19.2 [16.5 - 22.3] 6.14
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter malonaticus LMG 23826 19.1 [15.9 - 22.7] 21.5 [19.3 - 24.0] 18.6 [15.9 - 21.6] 6.45
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter malonaticus LMG 23826 20.5 [17.3 - 24.1] 21.5 [19.3 - 23.9] 19.8 [17.0 - 22.8] 6.04
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia fergusonii ATCC 35469 17.6 [14.5 - 21.1] 21.4 [19.2 - 23.8] 17.3 [14.7 - 20.3] 6.59
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 22.9 [19.6 - 26.6] 21.4 [19.1 - 23.8] 21.7 [18.9 - 24.7] 1.2
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella typhimurium ATCC 13311 19.7 [16.6 - 23.4] 21.4 [19.1 - 23.8] 19.2 [16.5 - 22.2] 1.96
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter malonaticus LMG 23826 19.6 [16.4 - 23.2] 21.4 [19.1 - 23.8] 19.0 [16.3 - 22.1] 6.09
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.5 [16.3 - 23.1] 21.4 [19.2 - 23.9] 18.9 [16.2 - 21.9] 4.19
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.3 [14.3 - 20.9] 21.4 [19.1 - 23.8] 17.2 [14.6 - 20.1] 5.71
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella flexneri ATCC 29903 17.2 [14.2 - 20.8] 21.4 [19.2 - 23.9] 17.1 [14.5 - 20.0] 5.84
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Shigella sonnei ATCC 29930 17.2 [14.2 - 20.7] 21.4 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.49
'Escherichia fergusonii ATCC 35469' (CU928158) Shimwellia blattae DSM 4481 17.6 [14.5 - 21.1] 21.4 [19.2 - 23.8] 17.4 [14.8 - 20.4] 6.57
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter malonaticus LMG 23826 19.5 [16.4 - 23.1] 21.4 [19.2 - 23.9] 19.0 [16.3 - 22.0] 6.91
'Escherichia coli SMS-3-5' (CP000970) Cronobacter muytjensii ATCC 51329 19.2 [16.1 - 22.8] 21.4 [19.2 - 23.9] 18.7 [16.0 - 21.7] 7.22
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Franconibacter pulveris DSM 19144 26.5 [23.1 - 30.1] 21.4 [19.1 - 23.8] 24.3 [21.5 - 27.4] 2.48
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia fergusonii ATCC 35469' (CU928158) 17.6 [14.5 - 21.1] 21.4 [19.2 - 23.8] 17.4 [14.8 - 20.4] 6.57
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Citrobacter koseri NCTC 10786 22.6 [19.3 - 26.2] 21.4 [19.1 - 23.8] 21.4 [18.6 - 24.5] 0.27
'Escherichia coli str. K-12 substr. W3110' (AP009048) Shimwellia blattae DSM 4481 17.3 [14.3 - 20.9] 21.4 [19.1 - 23.8] 17.2 [14.6 - 20.1] 5.71
'Escherichia sp. TW09308' (AEME00000000) Cronobacter sakazakii NBRC 102416 19.2 [16.0 - 22.8] 21.3 [19.1 - 23.7] 18.7 [16.0 - 21.7] 6.44
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli IAI39' (CU928164) 17.3 [14.2 - 20.8] 21.3 [19.0 - 23.7] 17.1 [14.5 - 20.1] 5.88
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli UMN026' (CU928163) 17.3 [14.2 - 20.8] 21.3 [19.1 - 23.8] 17.1 [14.5 - 20.1] 5.79
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia coli DSM 30083 17.2 [14.1 - 20.7] 21.3 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.87
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Franconibacter pulveris DSM 19144 17.8 [14.7 - 21.3] 21.3 [19.0 - 23.7] 17.5 [14.9 - 20.5] 5.98
'Shigella dysenteriae Sd197' (CP000034) Cronobacter condimenti 1330 18.8 [15.7 - 22.4] 21.3 [19.0 - 23.7] 18.4 [15.7 - 21.4] 4.52
'Escherichia coli IAI39' (CU928164) Cronobacter muytjensii ATCC 51329 19.5 [16.3 - 23.1] 21.3 [19.0 - 23.7] 18.9 [16.2 - 21.9] 7.08
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter muytjensii ATCC 51329 19.1 [15.9 - 22.7] 21.3 [19.0 - 23.7] 18.6 [15.9 - 21.6] 7.32
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Shimwellia blattae DSM 4481 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.5 [13.9 - 19.4] 6.02
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella enterica LT2 19.7 [16.6 - 23.3] 21.3 [19.1 - 23.7] 19.1 [16.4 - 22.2] 1.84
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Levinea malonatica NCTC 10810 18.7 [15.6 - 22.3] 21.3 [19.1 - 23.8] 18.3 [15.7 - 21.3] 2.73
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter muytjensii ATCC 51329 18.6 [15.5 - 22.2] 21.3 [19.1 - 23.8] 18.2 [15.6 - 21.2] 7.34
'Escherichia fergusonii ECD227' (CM001142) Cronobacter sakazakii NBRC 102416 19.3 [16.2 - 22.9] 21.3 [19.1 - 23.7] 18.8 [16.1 - 21.8] 6.71
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.4 [13.9 - 19.4] 5.84
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Franconibacter pulveris DSM 19144 18.8 [15.7 - 22.4] 21.3 [19.0 - 23.7] 18.4 [15.7 - 21.4] 6.07
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella typhimurium JCM 1652 16.7 [13.6 - 20.2] 21.3 [19.0 - 23.7] 16.6 [14.0 - 19.5] 4.45
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Shimwellia blattae DSM 4481 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.4 [13.9 - 19.4] 5.84
'Shigella dysenteriae Sd197' (CP000034) Franconibacter pulveris DSM 19144 19.2 [16.1 - 22.8] 21.3 [19.0 - 23.7] 18.7 [16.0 - 21.7] 5.3
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter muytjensii ATCC 51329 18.0 [14.9 - 21.6] 21.3 [19.0 - 23.7] 17.7 [15.1 - 20.7] 7.14
'Escherichia coli UMN026' (CU928163) Shimwellia blattae DSM 4481 17.3 [14.2 - 20.8] 21.3 [19.1 - 23.8] 17.1 [14.5 - 20.1] 5.79
'Escherichia coli IAI39' (CU928164) Shimwellia blattae DSM 4481 17.3 [14.2 - 20.8] 21.3 [19.0 - 23.7] 17.1 [14.5 - 20.1] 5.88
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 23.5 [20.2 - 27.2] 21.3 [19.0 - 23.7] 22.1 [19.3 - 25.2] 1.48
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Kosakonia sacchari SP1 22.1 [18.8 - 25.7] 21.3 [19.0 - 23.7] 21.0 [18.2 - 24.1] 0.33
'Escherichia coli S88' (CU928161) Shimwellia blattae DSM 4481 17.2 [14.1 - 20.7] 21.3 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.83
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli S88' (CU928161) 17.2 [14.1 - 20.7] 21.3 [19.1 - 23.8] 17.0 [14.4 - 20.0] 5.83
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.5 [13.5 - 20.0] 21.3 [19.0 - 23.7] 16.5 [13.9 - 19.4] 6.02
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella boydii ATCC 8700 20.2 [17.0 - 23.8] 21.2 [18.9 - 23.6] 19.5 [16.8 - 22.5] 2.96
'Escherichia coli str. 'clone D i14'' (CP002212) Shimwellia blattae DSM 4481 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Franconibacter pulveris DSM 19144 19.0 [15.8 - 22.5] 21.2 [18.9 - 23.6] 18.5 [15.8 - 21.5] 6.16
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Shimwellia blattae DSM 4481 17.2 [14.2 - 20.7] 21.2 [19.0 - 23.7] 17.0 [14.4 - 20.0] 6.63
'Escherichia coli SMS-3-5' (CP000970) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.3 [14.2 - 20.8] 21.2 [19.0 - 23.7] 17.1 [14.5 - 20.1] 6.01
'Escherichia coli O157:H7 str. Sakai' (BA000007) Shimwellia blattae DSM 4481 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.6] 16.7 [14.1 - 19.6] 5.97
'Escherichia coli UMN026' (CU928163) Cronobacter muytjensii ATCC 51329 19.5 [16.3 - 23.0] 21.2 [19.0 - 23.6] 18.9 [16.2 - 21.9] 7.0
'Escherichia sp. TW09308' (AEME00000000) Cronobacter malonaticus LMG 23826 19.4 [16.3 - 23.0] 21.2 [18.9 - 23.6] 18.9 [16.2 - 21.9] 6.57
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.0 [13.1 - 19.5] 21.2 [19.0 - 23.6] 16.0 [13.5 - 18.9] 5.93
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella enteritidis ATCC 13076 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.7] 16.7 [14.1 - 19.6] 4.37
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter muytjensii ATCC 51329 18.9 [15.8 - 22.5] 21.2 [19.0 - 23.7] 18.4 [15.8 - 21.4] 7.23
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli str. 'clone D i2'' (CP002211) 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter muytjensii ATCC 51329 20.3 [17.1 - 23.9] 21.2 [18.9 - 23.6] 19.5 [16.8 - 22.6] 6.92
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.4 [13.4 - 19.9] 21.2 [19.0 - 23.6] 16.3 [13.8 - 19.3] 6.13
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella choleraesuis DSM 14846 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.6] 16.7 [14.1 - 19.6] 4.37
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Shimwellia blattae DSM 4481 16.0 [13.1 - 19.5] 21.2 [19.0 - 23.6] 16.0 [13.5 - 18.9] 5.93
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter muytjensii ATCC 51329 19.2 [16.0 - 22.7] 21.2 [19.0 - 23.6] 18.7 [16.0 - 21.7] 7.18
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter muytjensii ATCC 51329 18.8 [15.7 - 22.4] 21.2 [19.0 - 23.6] 18.4 [15.7 - 21.4] 7.05
'Escherichia coli S88' (CU928161) Cronobacter muytjensii ATCC 51329 19.5 [16.3 - 23.1] 21.2 [18.9 - 23.6] 18.9 [16.2 - 21.9] 7.03
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.2 [14.2 - 20.7] 21.2 [19.0 - 23.7] 17.0 [14.4 - 20.0] 6.63
'Escherichia coli O157:H7 str. Sakai' (BA000007) Franconibacter pulveris DSM 19144 19.0 [15.9 - 22.6] 21.2 [18.9 - 23.6] 18.6 [15.9 - 21.6] 6.02
'Escherichia coli str. 'clone D i2'' (CP002211) Shimwellia blattae DSM 4481 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.8 [13.8 - 20.3] 21.2 [19.0 - 23.6] 16.7 [14.1 - 19.6] 5.97
'Escherichia fergusonii ECD227' (CM001142) Cronobacter malonaticus LMG 23826 19.5 [16.4 - 23.1] 21.2 [18.9 - 23.6] 18.9 [16.3 - 22.0] 6.83
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Salmonella enterica subsp. arizonae NCTC 8297 17.1 [14.1 - 20.6] 21.2 [19.0 - 23.6] 17.0 [14.4 - 19.9] 4.99
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) Cronobacter condimenti 1330 17.8 [14.7 - 21.3] 21.2 [19.0 - 23.6] 17.5 [14.9 - 20.5] 5.2
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Shimwellia blattae DSM 4481 16.4 [13.4 - 19.9] 21.2 [19.0 - 23.6] 16.3 [13.8 - 19.3] 6.13
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella typhimurium JCM 1652 19.6 [16.4 - 23.2] 21.2 [19.0 - 23.6] 19.0 [16.3 - 22.0] 2.01
'Escherichia coli SMS-3-5' (CP000970) Shimwellia blattae DSM 4481 17.3 [14.2 - 20.8] 21.2 [19.0 - 23.7] 17.1 [14.5 - 20.1] 6.01
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 'Escherichia coli str. 'clone D i14'' (CP002212) 17.4 [14.4 - 20.9] 21.2 [19.0 - 23.7] 17.2 [14.6 - 20.2] 5.95
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella choleraesuis DSM 14846 19.6 [16.5 - 23.2] 21.1 [18.9 - 23.5] 19.0 [16.3 - 22.0] 1.94
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Franconibacter pulveris DSM 19144 19.1 [15.9 - 22.7] 21.1 [18.9 - 23.5] 18.6 [15.9 - 21.6] 6.18
'Escherichia coli str. K-12 substr. W3110' (AP009048) Cronobacter condimenti 1330 19.4 [16.3 - 23.0] 21.1 [18.9 - 23.5] 18.9 [16.2 - 21.9] 4.97
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella sonnei ATCC 29930 19.8 [16.6 - 23.4] 21.1 [18.9 - 23.6] 19.2 [16.5 - 22.2] 3.06
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter muytjensii ATCC 51329 19.0 [15.9 - 22.6] 21.1 [18.8 - 23.5] 18.5 [15.9 - 21.5] 7.83
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Shimwellia blattae DSM 4481 16.8 [13.8 - 20.3] 21.1 [18.9 - 23.6] 16.7 [14.1 - 19.6] 5.76
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter sakazakii NBRC 102416 20.0 [16.8 - 23.6] 21.1 [18.9 - 23.6] 19.3 [16.6 - 22.3] 0.21
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Franconibacter pulveris DSM 19144 19.6 [16.4 - 23.2] 21.1 [18.8 - 23.5] 19.0 [16.3 - 22.0] 5.8
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter muytjensii ATCC 51329 19.4 [16.3 - 23.0] 21.1 [18.9 - 23.6] 18.9 [16.2 - 21.9] 7.14
'Escherichia coli O157:H7 str. Sakai' (BA000007) Cronobacter condimenti 1330 18.9 [15.7 - 22.5] 21.1 [18.9 - 23.6] 18.4 [15.7 - 21.4] 5.23
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.5 [13.5 - 20.0] 21.1 [18.9 - 23.5] 16.4 [13.9 - 19.4] 6.12
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter condimenti 1330 19.4 [16.2 - 23.0] 21.1 [18.8 - 23.5] 18.8 [16.1 - 21.8] 5.21
'Escherichia fergusonii ECD227' (CM001142) Cronobacter muytjensii ATCC 51329 19.0 [15.9 - 22.6] 21.1 [18.9 - 23.5] 18.5 [15.8 - 21.5] 7.7
'Escherichia coli str. K-12 substr. W3110' (AP009048) Franconibacter pulveris DSM 19144 20.1 [16.9 - 23.7] 21.1 [18.9 - 23.5] 19.4 [16.7 - 22.5] 5.75
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter muytjensii ATCC 51329 19.3 [16.2 - 22.9] 21.1 [18.9 - 23.5] 18.8 [16.1 - 21.8] 6.96
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Enterobacter hormaechei subsp. xiangfangensis LMG 27195 19.5 [16.3 - 23.1] 21.1 [18.9 - 23.6] 18.9 [16.2 - 21.9] 1.23
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter muytjensii ATCC 51329 19.2 [16.0 - 22.8] 21.1 [18.9 - 23.6] 18.7 [16.0 - 21.7] 7.78
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter muytjensii ATCC 51329 19.5 [16.4 - 23.1] 21.1 [18.9 - 23.5] 18.9 [16.2 - 22.0] 7.16
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella enterica subsp. arizonae NCTC 8297 19.7 [16.6 - 23.3] 21.1 [18.8 - 23.5] 19.1 [16.4 - 22.1] 2.56
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Enterobacter hormaechei subsp. steigerwaltii DSM 16691 19.4 [16.2 - 23.0] 21.1 [18.9 - 23.5] 18.8 [16.2 - 21.9] 0.96
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Citrobacter amalonaticus NCTC 10805 18.0 [14.9 - 21.5] 21.1 [18.9 - 23.5] 17.7 [15.0 - 20.7] 3.08
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Cronobacter condimenti 1330 18.7 [15.6 - 22.3] 21.1 [18.9 - 23.5] 18.3 [15.6 - 21.3] 5.38
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella enteritidis ATCC 13076 19.8 [16.6 - 23.4] 21.1 [18.9 - 23.6] 19.2 [16.5 - 22.2] 1.94
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 16.8 [13.8 - 20.3] 21.1 [18.9 - 23.6] 16.7 [14.1 - 19.6] 5.76
'Escherichia coli str. 'clone D i2'' (CP002211) Cronobacter condimenti 1330 19.4 [16.2 - 23.0] 21.1 [18.8 - 23.5] 18.8 [16.1 - 21.8] 5.21
'Escherichia coli SMS-3-5' (CP000970) Franconibacter pulveris DSM 19144 20.0 [16.8 - 23.6] 21.1 [18.8 - 23.5] 19.3 [16.6 - 22.3] 6.06
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Cronobacter condimenti 1330 24.0 [20.7 - 27.7] 21.1 [18.9 - 23.6] 22.5 [19.7 - 25.6] 1.69
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Franconibacter pulveris DSM 19144 18.9 [15.8 - 22.5] 21.1 [18.9 - 23.6] 18.4 [15.8 - 21.5] 5.89
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.2 [16.1 - 22.8] 21.1 [18.8 - 23.5] 18.7 [16.0 - 21.7] 3.59
'Escherichia coli str. 'clone D i14'' (CP002212) Cronobacter muytjensii ATCC 51329 19.5 [16.4 - 23.1] 21.1 [18.9 - 23.5] 18.9 [16.2 - 22.0] 7.16
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) Shimwellia blattae DSM 4481 16.5 [13.5 - 20.0] 21.1 [18.9 - 23.5] 16.4 [13.9 - 19.4] 6.12
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) Cronobacter condimenti 1330 18.5 [15.4 - 22.1] 21.0 [18.8 - 23.5] 18.1 [15.5 - 21.1] 5.4
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Kosakonia cowanii JCM 10956 22.1 [18.9 - 25.8] 21.0 [18.8 - 23.4] 21.0 [18.2 - 24.0] 2.1
'Escherichia coli SMS-3-5' (CP000970) Cronobacter condimenti 1330 19.5 [16.4 - 23.1] 21.0 [18.8 - 23.5] 18.9 [16.2 - 21.9] 5.27
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Cronobacter condimenti 1330 18.9 [15.7 - 22.5] 21.0 [18.7 - 23.4] 18.4 [15.7 - 21.4] 5.89
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Franconibacter pulveris DSM 19144 19.8 [16.6 - 23.4] 21.0 [18.8 - 23.4] 19.2 [16.5 - 22.2] 5.98
'Escherichia coli str. 'clone D i14'' (CP002212) Franconibacter pulveris DSM 19144 19.7 [16.6 - 23.3] 21.0 [18.8 - 23.5] 19.1 [16.4 - 22.1] 6.0
'Escherichia sp. TW09308' (AEME00000000) Cronobacter muytjensii ATCC 51329 18.9 [15.8 - 22.5] 21.0 [18.7 - 23.4] 18.4 [15.8 - 21.4] 7.44
'Escherichia coli S88' (CU928161) Cronobacter condimenti 1330 19.4 [16.3 - 23.0] 21.0 [18.7 - 23.4] 18.9 [16.2 - 21.9] 5.09
'Escherichia coli IAI39' (CU928164) Franconibacter pulveris DSM 19144 19.7 [16.6 - 23.3] 21.0 [18.8 - 23.4] 19.1 [16.4 - 22.1] 5.92
'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.2 [16.1 - 22.8] 21.0 [18.8 - 23.5] 18.7 [16.0 - 21.7] 3.7
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia marmotae HT073016 19.4 [16.2 - 23.0] 21.0 [18.8 - 23.4] 18.8 [16.1 - 21.9] 3.76
'Escherichia coli IAI39' (CU928164) Cronobacter condimenti 1330 19.3 [16.1 - 22.9] 21.0 [18.8 - 23.4] 18.7 [16.1 - 21.8] 5.14
'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) Cronobacter condimenti 1330 18.7 [15.6 - 22.3] 21.0 [18.8 - 23.5] 18.3 [15.6 - 21.3] 5.28
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Enterobacter cloacae ATCC 13047 18.7 [15.5 - 22.2] 21.0 [18.8 - 23.5] 18.2 [15.6 - 21.2] 1.92
'Escherichia coli S88' (CU928161) Franconibacter pulveris DSM 19144 19.8 [16.6 - 23.4] 21.0 [18.7 - 23.4] 19.1 [16.4 - 22.2] 5.87
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Pseudocitrobacter faecalis DSM 27453 20.6 [17.4 - 24.2] 21.0 [18.7 - 23.4] 19.8 [17.1 - 22.8] 1.06
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli S88' (CU928161) 20.1 [16.9 - 23.7] 21.0 [18.8 - 23.5] 19.4 [16.7 - 22.4] 3.4
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) Cronobacter condimenti 1330 18.5 [15.4 - 22.0] 21.0 [18.7 - 23.4] 18.1 [15.4 - 21.1] 5.1
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia coli DSM 30083 20.1 [16.9 - 23.7] 21.0 [18.8 - 23.5] 19.4 [16.7 - 22.4] 3.43
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter malonaticus LMG 23826 19.8 [16.7 - 23.4] 21.0 [18.8 - 23.4] 19.2 [16.5 - 22.2] 0.34
'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) Franconibacter pulveris DSM 19144 18.9 [15.8 - 22.5] 21.0 [18.8 - 23.5] 18.5 [15.8 - 21.5] 6.67
'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.4 [16.3 - 23.0] 21.0 [18.7 - 23.4] 18.8 [16.2 - 21.9] 3.41
'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.6 [16.5 - 23.2] 21.0 [18.8 - 23.4] 19.0 [16.3 - 22.0] 3.68
'Escherichia coli str. 'clone D i2'' (CP002211) Franconibacter pulveris DSM 19144 19.7 [16.6 - 23.3] 21.0 [18.8 - 23.5] 19.1 [16.4 - 22.1] 6.0
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.1 [14.1 - 20.6] 20.9 [18.7 - 23.3] 16.9 [14.3 - 19.9] 5.93
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Citrobacter amalonaticus NCTC 10805 22.5 [19.2 - 26.1] 20.9 [18.7 - 23.4] 21.3 [18.5 - 24.3] 0.65
'Escherichia coli UMN026' (CU928163) Cronobacter condimenti 1330 19.3 [16.2 - 22.9] 20.9 [18.7 - 23.4] 18.7 [16.1 - 21.8] 5.05
'Escherichia coli H299' (ADBC01000001-ADBC01000229) Cronobacter condimenti 1330 19.0 [15.8 - 22.5] 20.9 [18.7 - 23.4] 18.5 [15.8 - 21.5] 5.02
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Shimwellia blattae DSM 4481 17.1 [14.1 - 20.6] 20.9 [18.7 - 23.3] 16.9 [14.3 - 19.9] 5.93
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter muytjensii ATCC 51329 19.3 [16.2 - 22.9] 20.9 [18.7 - 23.3] 18.8 [16.1 - 21.8] 1.21
'Escherichia fergusonii ATCC 35469' (CU928158) Cronobacter condimenti 1330 19.3 [16.2 - 22.9] 20.9 [18.7 - 23.3] 18.8 [16.1 - 21.8] 5.83
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Salmonella bongori NCTC 12419 19.9 [16.7 - 23.5] 20.9 [18.7 - 23.4] 19.2 [16.5 - 22.3] 2.75
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella flexneri ATCC 29903 20.3 [17.1 - 23.9] 20.9 [18.7 - 23.4] 19.5 [16.8 - 22.6] 3.41
'Escherichia fergusonii ATCC 35469' (CU928158) Franconibacter pulveris DSM 19144 19.4 [16.3 - 23.0] 20.9 [18.7 - 23.3] 18.8 [16.1 - 21.9] 6.62
'Escherichia coli UMN026' (CU928163) Franconibacter pulveris DSM 19144 20.1 [17.0 - 23.8] 20.9 [18.6 - 23.3] 19.4 [16.7 - 22.4] 5.84
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) Cronobacter condimenti 1330 19.5 [16.3 - 23.1] 20.9 [18.7 - 23.3] 18.9 [16.2 - 21.9] 5.2
'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 18.8 [15.7 - 22.4] 20.8 [18.5 - 23.2] 18.3 [15.6 - 21.3] 3.5
'Escherichia sp. TW09308' (AEME00000000) Cronobacter condimenti 1330 18.6 [15.5 - 22.2] 20.8 [18.6 - 23.2] 18.1 [15.5 - 21.1] 5.49
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli SMS-3-5' (CP000970) 20.7 [17.5 - 24.3] 20.8 [18.6 - 23.2] 19.8 [17.1 - 22.9] 3.58
'Escherichia sp. TW09308' (AEME00000000) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 19.6 [16.4 - 23.2] 20.8 [18.6 - 23.2] 19.0 [16.3 - 22.0] 3.8
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli str. 'clone D i14'' (CP002212) 20.2 [17.0 - 23.8] 20.8 [18.6 - 23.3] 19.4 [16.7 - 22.4] 3.52
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli UMN026' (CU928163) 20.4 [17.2 - 24.0] 20.8 [18.6 - 23.3] 19.6 [16.9 - 22.7] 3.36
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Shigella dysenteriae Sd197' (CP000034) 20.3 [17.1 - 23.9] 20.8 [18.6 - 23.2] 19.5 [16.8 - 22.6] 2.83
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli IAI39' (CU928164) 20.1 [16.9 - 23.7] 20.8 [18.6 - 23.3] 19.4 [16.7 - 22.4] 3.45
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia coli str. 'clone D i2'' (CP002211) 20.2 [17.0 - 23.8] 20.8 [18.6 - 23.3] 19.4 [16.7 - 22.4] 3.52
'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 20.7 [17.5 - 24.3] 20.8 [18.5 - 23.2] 19.9 [17.1 - 22.9] 3.5
'Escherichia fergusonii ECD227' (CM001142) Cronobacter condimenti 1330 19.3 [16.1 - 22.9] 20.8 [18.6 - 23.2] 18.7 [16.0 - 21.7] 5.76
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Kosakonia sacchari SP1 18.7 [15.6 - 22.3] 20.8 [18.6 - 23.2] 18.3 [15.6 - 21.3] 2.76
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shigella dysenteriae ATCC 13313 20.0 [16.9 - 23.7] 20.8 [18.6 - 23.2] 19.3 [16.6 - 22.4] 3.1
'Escherichia coli str. K-12 substr. W3110' (AP009048) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 21.5 [18.2 - 25.1] 20.8 [18.6 - 23.3] 20.5 [17.7 - 23.5] 3.28
'Escherichia sp. TW09308' (AEME00000000) Franconibacter pulveris DSM 19144 18.7 [15.6 - 22.3] 20.8 [18.6 - 23.2] 18.3 [15.6 - 21.3] 6.28
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Franconibacter pulveris DSM 19144 19.4 [16.3 - 23.0] 20.7 [18.5 - 23.1] 18.8 [16.2 - 21.9] 0.05
'Escherichia fergusonii ECD227' (CM001142) Shimwellia blattae DSM 4481 17.5 [14.4 - 21.0] 20.7 [18.4 - 23.1] 17.2 [14.6 - 20.2] 6.5
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 18.4 [15.3 - 21.9] 20.7 [18.4 - 23.1] 18.0 [15.3 - 21.0] 2.43
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Escherichia fergusonii ATCC 35469 20.8 [17.6 - 24.4] 20.7 [18.5 - 23.2] 19.9 [17.2 - 23.0] 4.16
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Escherichia marmotae HT073016 17.2 [14.2 - 20.7] 20.7 [18.4 - 23.1] 17.0 [14.4 - 20.0] 6.2
'Escherichia sp. TW09308' (AEME00000000) Shimwellia blattae DSM 4481 17.0 [14.0 - 20.5] 20.7 [18.5 - 23.2] 16.8 [14.3 - 19.8] 6.23
'Escherichia coli H299' (ADBC01000001-ADBC01000229) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 20.1 [16.9 - 23.7] 20.7 [18.5 - 23.2] 19.4 [16.7 - 22.4] 3.33
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) Shimwellia blattae DSM 4481 18.4 [15.3 - 21.9] 20.7 [18.4 - 23.1] 18.0 [15.3 - 21.0] 2.43
'Escherichia coli O157:H7 str. Sakai' (BA000007) 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 20.2 [17.0 - 23.8] 20.7 [18.5 - 23.2] 19.4 [16.7 - 22.4] 3.54
'Escherichia fergusonii ECD227' (CM001142) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.5 [14.4 - 21.0] 20.7 [18.4 - 23.1] 17.2 [14.6 - 20.2] 6.5
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia fergusonii ATCC 35469' (CU928158) 20.9 [17.6 - 24.5] 20.7 [18.5 - 23.2] 20.0 [17.2 - 23.0] 4.14
'Escherichia fergusonii ECD227' (CM001142) Franconibacter pulveris DSM 19144 19.3 [16.2 - 22.9] 20.7 [18.5 - 23.2] 18.8 [16.1 - 21.8] 6.54
'Escherichia sp. TW09308' (AEME00000000) 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 17.0 [14.0 - 20.5] 20.7 [18.5 - 23.2] 16.8 [14.3 - 19.8] 6.23
'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 'Escherichia fergusonii ECD227' (CM001142) 20.9 [17.7 - 24.5] 20.6 [18.4 - 23.0] 20.0 [17.2 - 23.0] 4.07
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Kosakonia cowanii JCM 10956 18.5 [15.4 - 22.0] 20.6 [18.4 - 23.0] 18.0 [15.4 - 21.0] 0.33
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Pseudocitrobacter faecalis DSM 27453 17.9 [14.8 - 21.4] 20.6 [18.4 - 23.0] 17.5 [14.9 - 20.5] 3.49
'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) Cronobacter condimenti 1330 18.7 [15.6 - 22.3] 20.5 [18.3 - 22.9] 18.2 [15.6 - 21.2] 0.74
Table 4: Strains in your dataset

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TYGS ID Kind Species cluster Subspecies cluster Preferred name Deposit Authority Other deposits Synonymous taxon names Base pairs Percent G+C No. proteins Goldstamp Bioproject accession Biosample accession Assembly accession IMG OID
TYGS ID Kind Species cluster Subspecies cluster Preferred name Deposit Authority Other deposits Synonymous taxon names Base pairs Percent G+C No. proteins Goldstamp Bioproject accession Biosample accession Assembly accession IMG OID
11556 type strain 1 1 Citrobacter koseri NCTC 10786 Frederiksen 1970 LMG 5519; CCUG 4859; DSM 4595; ATCC 27028; JCM 1658; CIP 105014; CIP 82.87; DSMZ 4570 Citrobacter koseri 4,661,458 53.81 6398 PRJEB6403 SAMEA2665132 GCA_900446925
11560 type strain 2 0 Citrobacter amalonaticus NCTC 10805 (Young et al. 1971) Brenner and Farmer 1982 LMG 7873; CCUG 4860; CECT 863; ATCC 25405; JCM 1661; CIP 82.89; DSMZ 4593 Citrobacter amalonaticus; Levinea amalonatica 5,093,340 53.43 5330 PRJEB6403 SAMEA2612491 GCA_900460855
11561 type strain 1 1 Levinea malonatica NCTC 10810 Young et al. 1971 DSM 4596; ATCC 25408; JCM 1660 Levinea malonatica 4,732,730 53.78 5321 PRJEB6403 SAMEA2665133 GCA_900461075
1676 type strain 3 22 Escherichia coli DSM 30083 (Migula 1895) Castellani and Chalmers 1919 LMG 2092; CCUG 24; CCUG 29300; ATCC 11775; NCTC 9001.; JCM 1649; NBRC 102203; CIP 54.8; NCCB 54008 Escherichia coli 5,037,933 50.64 4762 Gp0007996 PRJNA50621 SAMN00718807 GCA_000690815 2528311135
1736 type strain 4 2 Franconibacter pulveris DSM 19144 (Stephan et al. 2008) Stephan et al. 2014 601/05; LMG 24057; JCM 16471 Cronobacter pulveris; Enterobacter pulveris; Franconibacter pulveris 4,704,261 56.55 4310 Gp0013017 PRJNA221041 SAMN02743983 GCA_000621185 2556921006
17639 type strain 14 3 Enterobacter hormaechei subsp. steigerwaltii DSM 16691 Hoffmann et al. 2016 CIP 108489; EN-562 Enterobacter hormaechei subsp. steigerwaltii 4,782,480 55.55 4424 PRJNA224116 SAMN05581751 GCF_001729725
19333 type strain 5 4 Salmonella enterica subsp. arizonae NCTC 8297 (Borman 1957) Le Minor and Popoff 1987 CCUG 6322; DSM 9386; ATCC 13314; CIP 82.30 Salmonella arizonae; Salmonella choleraesuis subsp. arizonae; Salmonella enterica subsp. arizonae 4,545,679 51.52 5747 PRJEB6403 SAMEA2665124 GCA_900456225
20292 type strain 3 19 Shigella flexneri ATCC 29903 Castellani and Chalmers 1919 DSM 4782; CIP 82.48 Shigella flexneri 4,938,295 50.67 5112 PRJNA218110 SAMN08330274 GCA_002950215
20293 type strain 3 19 Shigella boydii ATCC 8700 Ewing 1949 CCUG 49022; DSM 7532; NCTC 12985; CIP 82.50; P288 Shigella boydii 4,525,323 51.12 4913 PRJNA218110 SAMN08330244 GCA_002946735
20376 type strain 6 5 Pseudocitrobacter faecalis DSM 27453 Kämpfer et al. 2014 25 CIT; LMG 27751; CCM 8479 Pseudocitrobacter faecalis 5,155,180 53.02 4895 2770939623
23825 type strain 18 14 Salmonella choleraesuis DSM 14846 (Smith 1894) Weldin 1927 ATCC 13312; NCTC 5735; JCM 1651; CIP 55.133; F. Kauffmann 1348 Salmonella choleraesuis; Salmonella choleraesuis subsp. choleraesuis 4,679,634 52.14 4514 2756170275
3094 type strain 7 6 Cronobacter condimenti 1330 Joseph et al. 2012 LMG 26250; CECT 7863 Cronobacter condimenti 4,480,460 55.77 4272 PRJEB164 SAMEA2272515 GCA_000319285
4132 type strain 8 7 Kosakonia cowanii JCM 10956 (Inoue et al. 2001) Brady et al. 2013 888-76; CCUG 45998 A; CCUG 45998 B; DSM 18146; CIP 107300 Enterobacter cowanii; Kosakonia cowanii 4,810,025 56.18 5828 Gp0026793 PRJDB901 SAMD00016805 GCA_001312885
4441 type strain 9 8 Cronobacter malonaticus LMG 23826 Iversen et al. 2008 DSM 18702; CDC 1058-77; strain E825 Cronobacter malonaticus 4,434,037 56.84 4130 Gp0020487 PRJNA89099 SAMN02952929 GCA_000409305 2548876974
4446 type strain 10 9 Cronobacter muytjensii ATCC 51329 Iversen et al. 2008 DSM 21870; CIP 103581 Cronobacter muytjensii 4,322,611 57.72 3916 Gp0020623 PRJNA89111 SAMN02952928 GCA_000409285 2548876993
4824 type strain 11 17 Escherichia marmotae HT073016 Liu et al. 2015 DSM 28771; CGMCC 1.12862 Escherichia marmotae 4,493,998 50.31 4255 Gp0117761 PRJNA247449 SAMN02777259 GCA_000807695
5096 type strain 12 10 Cronobacter sakazakii NBRC 102416 (Farmer et al. 1980) Iversen et al. 2008 LMG 5740; CCUG 14558; ATCC 29544; NCTC 11467; JCM 1233; CDC 4562-70; CIP 103183; DSMZ 4485 Cronobacter sakazakii; Enterobacter sakazakii 4,548,307 56.72 4241 Gp0024044 PRJDB277 SAMD00000350 GCA_000684935 2576861057
5625 type strain 13 11 Kosakonia sacchari SP1 (Zhu et al. 2013) Gu et al. 2014 LMG 26783; DSM 100203; CGMCC 1.12102; SP1 Enterobacter sacchari; Kosakonia sacchari 4,902,027 53.74 4581 Gp0033762 PRJNA224116 SAMN02472168 GCF_000300455 2547132181
5700 type strain 14 12 Enterobacter hormaechei subsp. xiangfangensis LMG 27195 (Gu et al. 2014) Sutton et al. 2018 10-17; CCUG 62994; NCIMB 14836 Enterobacter hormaechei subsp. xiangfangensis; Enterobacter xiangfangensis 4,661,849 55.28 4323 PRJNA224116 SAMN05581746 GCF_001729785
573 type strain 15 13 Enterobacter cloacae ATCC 13047 (Jordan 1890) Hormaeche and Edwards 1960 LMG 2783; CCUG 28448; CCUG 29301; CCUG 6323; NCTC 10005; JCM 1232; IFO 13535; NBRC 13535; CIP 60.85; DSMZ 30054; HAMBI 1295; HAMBI 96 Enterobacter cloacae; Enterobacter cloacae subsp. cloacae 5,598,795 54.58 5518 Gp0006802 PRJNA45793 SAMN02603901 GCA_000025565 646564529
575 type strain 16 20 Shimwellia blattae DSM 4481 (Burgess et al. 1973) Priest and Barker 2010 LMG 3030; ATCC 29907; NCTC 12127.; JCM 1650; CDC 9005-74; CIP 103175; CIP 104942; HAMBI 1692 Escherichia blattae; Shimwellia blattae 4,158,725 56.51 3904 Gp0001398 PRJNA36307 SAMN02603253 GCA_000262305 2513020017
576 type strain 17 21 Escherichia fergusonii ATCC 35469 Farmer et al. 1985 LMG 7866; DSM 13698; NCTC 12128; JCM 21226; NBRC 102419; CDC 0568-73; CIP 103357; CIP 104947 Escherichia fergusonii 4,643,861 49.92 4324 Gp0001407 PRJNA33369 SAMEA3138228 GCA_000026225 643692022
578 type strain 18 14 Salmonella enterica LT2 (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 CCUG 42060; DSM 17058; DSM 27656; ATCC 43971; NCTC 12416; NBRC 13245; CIP 60.62; NCIMB 11450 Salmonella enterica; Salmonella enterica subsp. enterica 4,951,371 52.24 4554 Gp0000715 PRJNA241 SAMN02604315 GCA_000006945 637000255
6095 type strain 18 14 Salmonella typhimurium ATCC 13311 (Loeffler 1892) Castellani and Chalmers 1919 ATCC 13311; NCTC 74; JCM 1652; CIP 58.58 Salmonella typhimurium 4,831,756 52.11 4361 Gp0103826 PRJNA256479 SAMN02943517 GCA_000743055
6097 type strain 18 14 Salmonella enteritidis ATCC 13076 (Gaertner 1888) Castellani and Chalmers 1919 NCTC 12694 Salmonella enteritidis 4,693,127 52.14 4414 PRJNA308909 SAMN04417439 GCA_001643395
6120 type strain 18 14 Salmonella typhimurium JCM 1652 (Loeffler 1892) Castellani and Chalmers 1919 ATCC 13311; NCTC 74; JCM 1652; CIP 58.58 Salmonella typhimurium 4,747,271 52.06 5270 PRJDB611 SAMD00009942 GCA_000614485
6303 type strain 3 19 Shigella sonnei ATCC 29930 (Levine 1920) Weldin 1927 CECT 4887; NCTC 12984; CIP 82.49; DSMZ 5570 Shigella sonnei 4,994,001 51.01 5043 PRJNA218110 SAMN08330284 GCA_002950395
6328 type strain 3 19 Shigella dysenteriae ATCC 13313 (Shiga 1897) Castellani and Chalmers 1919 NCTC 4837; CIP 57.28; DSMZ 4781 Shigella dysenteriae 4,578,459 50.98 5232 PRJNA218110 SAMN08330256 GCA_002949675
810 type strain 19 15 Salmonella bongori NCTC 12419 (Le Minor et al. 1985) Reeves et al. 1989 CCUG 30042; DSM 13772; ATCC 43975; CIP 82.33 Salmonella bongori; Salmonella choleraesuis subsp. bongori; Salmonella enterica subsp. bongori 4,460,105 51.33 3864 Gp0001845 PRJNA351 SAMEA3138409 GCA_000252995 650716084
U870 user strain 3 19 'Escherichia coli O157:H7 str. EC4501' (ABHT01000001-ABHT01000250) 5,677,181 50.58 5721
U871 user strain 20 16 'Escherichia albertii TW07627' (ABKX01000001-ABKX01000064) 4,698,533 49.88 4870
U872 user strain 3 23 'Escherichia coli TA143' (ADAY01000001-ADAY01000168) 4,829,725 50.58 4603
U873 user strain 3 23 'Escherichia coli H299' (ADBC01000001-ADBC01000229) 5,248,906 50.75 5102
U874 user strain 3 23 'Escherichia coli MS 198-1' (ADTJ01000001-ADTJ01000564) 5,236,490 50.67 5113
U875 user strain 3 23 'Escherichia coli MS 69-1' (ADTP01000001-ADTP01000425) 5,207,549 50.38 4952
U876 user strain 3 24 'Escherichia coli MS 21-1' (ADTR01000001-ADTR01000540) 5,282,923 50.39 5267
U877 user strain 3 22 'Escherichia coli MS 200-1' (ADUC01000001-ADUC01000445) 5,042,708 50.49 4768
U878 user strain 11 17 'Escherichia sp. TW09308' (AEME00000000) 4,809,826 50.28 4639
U879 user strain 3 19 'Escherichia coli str. K-12 substr. W3110' (AP009048) 4,646,332 50.8 4327
U880 user strain 3 19 'Escherichia coli O157:H7 str. Sakai' (BA000007) 5,498,578 50.54 5299
U881 user strain 21 18 'Atlantibacter hermannii NBRC 105704' (BAFF01000001-BAFF01000044) 4,495,280 54.08 4168
U882 user strain 17 21 'Escherichia fergusonii ECD227' (CM001142) 4,509,864 50.01 4237
U883 user strain 3 19 'Shigella dysenteriae Sd197' (CP000034) 4,369,232 51.25 4977
U884 user strain 3 24 'Escherichia coli SMS-3-5' (CP000970) 5,068,389 50.5 4651
U885 user strain 16 20 'Shimwellia blattae DSM 4481 = NBRC 105725' (CP001560) 4,158,725 56.51 3825
U886 user strain 3 22 'Escherichia coli str. 'clone D i2'' (CP002211) 5,038,386 50.56 4609
U887 user strain 3 22 'Escherichia coli str. 'clone D i14'' (CP002212) 5,038,386 50.56 4609
U888 user strain 17 21 'Escherichia fergusonii ATCC 35469' (CU928158) 4,588,711 49.94 4262
U889 user strain 3 22 'Escherichia coli S88' (CU928161) 5,032,268 50.68 4747
U890 user strain 3 23 'Escherichia coli UMN026' (CU928163) 5,202,090 50.72 4825
U891 user strain 3 24 'Escherichia coli IAI39' (CU928164) 5,132,068 50.63 4863
Methods, Results and References

Materials and Methods

The genome sequence data were uploaded to the Type (Strain) Genome Server (TYGS), a free bioinformatics platform available under https://tygs.dsmz.de, for a whole genome-based taxonomic analysis [1]. The results were provided by the TYGS on 2018-11-28. In brief, the TYGS analysis was subdivided into the following steps:

Determination of closely related type strains

The 16S rDNA gene sequences were extracted from the user genomes using RNAmmer [2] and each sequence was subsequently BLASTed [3] against the 16S rDNA gene sequence of each of the currently 9026 type strains available in the TYGS database. This was used as a proxy to find the best 50 matching type strains (according to the bitscore) for each user genome and to subsequently calculate precise distances using the Genome BLAST Distance Phylogeny approach (GBDP) under the algorithm 'coverage' and distance formula d5 [4]. The distances were finally used to determine the 10 closest type strain genomes for each of the user genomes.

Pairwise comparison of genome sequences

All pairwise comparisons among the set of genomes were conducted using GBDP and intergenomic distances inferred under the algorithm 'trimming' and distance formula d5 [4]. 100 distance replicates were calculated each. Digital DDH values and confidence intervals were calculated using the recommended settings of the GGDC 2.1 [4].

Phylogenetic inference

The resulting intergenomic distances were used to infer a balanced minimum evolution tree with branch support via FASTME 2.1.4 including SPR postprocessing [5]. Branch support was inferred from 100 pseudo-bootstrap replicates each. The trees were rooted at the midpoint [6] and visualized with PhyD3 [7].

Type-based species and subspecies clustering

The type-based species clustering using a 70% dDDH radius around each of the 29 type strains was done as previously applied [8]. The resulting groups are shown in Table 1 and 4. Subspecies clustering was done using a 79% dDDH threshold as previously introduced [9].

Results

Type-based species and subspecies clustering

The resulting species and subspecies clusters are listed in Table 4, whereas the taxonomic identification of the query strains is found in Table 1. Briefly, the clustering yielded 21 species clusters and the provided query strains were assigned to 6 of these. Moreover, user strains were located in 9 of 25 subspecies clusters.

Figure caption genome tree

Figure 1. Tree inferred with FastME 2.1.6.1 [5] from GBDP distances calculated from genome sequences. The branch lengths are scaled in terms of GBDP distance formula d5. The numbers above branches are GBDP pseudo-bootstrap support values from 100 replications, with an average branch support of 84.5 %. The tree was rooted at the midpoint [6].

Figure caption SSU tree

Figure 2. Tree inferred with FastME 2.1.6.1 [5] from GBDP distances calculated from 16S rDNA gene sequences. The branch lengths are scaled in terms of GBDP distance formula d5. The numbers above branches are GBDP pseudo-bootstrap support values from 100 replications, with an average branch support of 61.7 %. The tree was rooted at the midpoint [6].

References

[1] Meier-Kolthoff JP, Göker M. TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy. Nat. Commun. 2019;10: 2182. DOI: 10.1038/s41467-019-10210-3

[2] Lagesen K, Hallin P. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. Oxford Univ Press; 2007;35: 3100–3108. DOI: 10.1093/nar/gkm160

[3] Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, et al. BLAST+: architecture and applications. BMC Bioinformatics. 2009;10: 421. DOI: 10.1186/1471-2105-10-421

[4] Meier-Kolthoff JP, Auch AF, Klenk H-P, Göker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics. 2013;14: 60. DOI: 10.1186/1471-2105-14-60

[5] Lefort V, Desper R, Gascuel O. FastME 2.0: A comprehensive, accurate, and fast distance-based phylogeny inference program. Mol Biol Evol. 2015;32: 2798–2800. DOI: 10.1093/molbev/msv150

[6] Farris JS. Estimating phylogenetic trees from distance matrices. Am Nat. 1972;106: 645–667.

[7] Kreft L, Botzki A, Coppens F, Vandepoele K, Van Bel M. PhyD3: A phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization. Bioinformatics. 2017;33: 2946–2947. DOI: 10.1093/bioinformatics/btx324

[8] Liu Y, Lai Q, Göker M, Meier-Kolthoff JP, Wang M, Sun Y, et al. Genomic insights into the taxonomic status of the Bacillus cereus group. Sci Rep. Nature Publishing Group; 2015;5: 14082. DOI: 10.1038/srep14082

[9] Meier-Kolthoff JP, Hahnke RL, Petersen J, Scheuner C, Michael V, Fiebig A, et al. Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy. Stand Genomic Sci. 2014;9: 2. DOI: 10.1186/1944-3277-9-2